More than 300 homologs were found in PanDaTox collection
for query gene Rmet_3683 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  73.66 
 
 
594 aa  817    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  100 
 
 
613 aa  1219    Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  57.89 
 
 
579 aa  557  1e-157  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_010678  Rpic_4051  methyl-accepting chemotaxis sensory transducer  50.16 
 
 
634 aa  500  1e-140  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4163  methyl-accepting chemotaxis sensory transducer  50.16 
 
 
634 aa  500  1e-140  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  49.9 
 
 
573 aa  456  1e-127  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  52.02 
 
 
558 aa  451  1e-125  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  50.97 
 
 
573 aa  446  1.0000000000000001e-124  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_010622  Bphy_1586  methyl-accepting chemotaxis sensory transducer  51.16 
 
 
553 aa  439  9.999999999999999e-123  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  69.04 
 
 
520 aa  407  1.0000000000000001e-112  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  61.96 
 
 
598 aa  403  1e-111  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  57.58 
 
 
515 aa  403  1e-111  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  57.34 
 
 
515 aa  400  9.999999999999999e-111  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  64.07 
 
 
585 aa  398  1e-109  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  76.85 
 
 
551 aa  398  1e-109  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_007974  Rmet_5935  methyl-accepting chemotaxis sensory transducer  71.21 
 
 
520 aa  397  1e-109  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6336  methyl-accepting chemotaxis sensory transducer  46.15 
 
 
581 aa  397  1e-109  Burkholderia phytofirmans PsJN  Bacteria  normal  0.794546  normal 
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  68.33 
 
 
515 aa  395  1e-108  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_010084  Bmul_1870  methyl-accepting chemotaxis sensory transducer  48.74 
 
 
562 aa  393  1e-108  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00389756 
 
 
-
 
NC_010622  Bphy_0137  methyl-accepting chemotaxis sensory transducer  47.97 
 
 
515 aa  392  1e-108  Burkholderia phymatum STM815  Bacteria  normal  0.5368  normal 
 
 
-
 
NC_010508  Bcenmc03_1423  methyl-accepting chemotaxis sensory transducer  48.94 
 
 
557 aa  393  1e-108  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_0963  methyl-accepting chemotaxis sensory transducer  48.94 
 
 
557 aa  394  1e-108  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0423677  n/a   
 
 
-
 
NC_008542  Bcen2424_1445  methyl-accepting chemotaxis sensory transducer  48.94 
 
 
557 aa  393  1e-108  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0931  methyl-accepting chemotaxis protein, putative  48.93 
 
 
653 aa  389  1e-107  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  47.34 
 
 
576 aa  391  1e-107  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  43.77 
 
 
589 aa  392  1e-107  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  66.57 
 
 
519 aa  391  1e-107  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_1696  methyl-accepting chemotaxis protein  48.93 
 
 
647 aa  389  1e-106  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0745582  n/a   
 
 
-
 
NC_010681  Bphyt_0412  methyl-accepting chemotaxis sensory transducer  48.14 
 
 
521 aa  389  1e-106  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3767  methyl-accepting chemotaxis sensory transducer  40.04 
 
 
544 aa  385  1e-106  Delftia acidovorans SPH-1  Bacteria  normal  0.155197  normal  0.170651 
 
 
-
 
NC_007434  BURPS1710b_1850  methyl-accepting chemotaxis protein, putative  48.93 
 
 
653 aa  388  1e-106  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0745  putative methyl-accepting chemotaxis protein  48.93 
 
 
558 aa  388  1e-106  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1674  methyl-accepting chemotaxis protein  48.74 
 
 
647 aa  387  1e-106  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1464  putative methyl-accepting chemotaxis protein  48.93 
 
 
558 aa  388  1e-106  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  59.24 
 
 
579 aa  389  1e-106  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008836  BMA10229_A0417  putative methyl-accepting chemotaxis protein  48.93 
 
 
558 aa  388  1e-106  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  74.27 
 
 
513 aa  383  1e-105  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  62.86 
 
 
559 aa  383  1e-105  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_010676  Bphyt_4450  methyl-accepting chemotaxis sensory transducer  67.64 
 
 
519 aa  384  1e-105  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000313766  normal 
 
 
-
 
NC_013421  Pecwa_0104  methyl-accepting chemotaxis sensory transducer  44.34 
 
 
548 aa  384  1e-105  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0557  methyl-accepting chemotaxis sensory transducer  68.39 
 
 
627 aa  384  1e-105  Burkholderia phytofirmans PsJN  Bacteria  normal  0.191348  normal  0.480006 
 
 
-
 
NC_007951  Bxe_A4159  methyl-accepting chemotaxis sensory transducer  67.57 
 
 
611 aa  385  1e-105  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  72.64 
 
 
513 aa  381  1e-104  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  59.04 
 
 
621 aa  380  1e-104  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  72.64 
 
 
513 aa  381  1e-104  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_007651  BTH_I2629  methyl-accepting chemotaxis protein  50.1 
 
 
558 aa  380  1e-104  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3862  methyl-accepting chemotaxis sensory transducer  42.73 
 
 
555 aa  380  1e-104  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  62.35 
 
 
519 aa  380  1e-104  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  44.47 
 
 
584 aa  379  1e-103  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_007651  BTH_I0438  methyl-accepting chemotaxis protein  57.08 
 
 
512 aa  378  1e-103  Burkholderia thailandensis E264  Bacteria  normal  0.212381  n/a   
 
 
-
 
NC_013421  Pecwa_0106  methyl-accepting chemotaxis sensory transducer  42.1 
 
 
556 aa  378  1e-103  Pectobacterium wasabiae WPP163  Bacteria  normal  0.405526  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  45.85 
 
 
578 aa  377  1e-103  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  53.46 
 
 
521 aa  375  1e-103  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  48.38 
 
 
513 aa  377  1e-103  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0112  methyl-accepting chemotaxis sensory transducer  42.68 
 
 
556 aa  375  1e-102  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3613  methyl-accepting chemotaxis sensory transducer  44.63 
 
 
530 aa  372  1e-102  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4046  methyl-accepting chemotaxis sensory transducer  41.64 
 
 
560 aa  375  1e-102  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA3184  methyl-accepting chemotaxis protein  67.76 
 
 
511 aa  373  1e-102  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  64.72 
 
 
566 aa  374  1e-102  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_007434  BURPS1710b_0685  methyl-accepting chemotaxis protein  67.76 
 
 
526 aa  373  1e-102  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0110  methyl-accepting chemotaxis sensory transducer  43.68 
 
 
548 aa  375  1e-102  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.975087  n/a   
 
 
-
 
NC_009076  BURPS1106A_0520  methyl-accepting chemotaxis protein  67.46 
 
 
546 aa  373  1e-102  Burkholderia pseudomallei 1106a  Bacteria  normal  0.640738  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  57.77 
 
 
579 aa  375  1e-102  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_012880  Dd703_3864  methyl-accepting chemotaxis sensory transducer  42.99 
 
 
543 aa  375  1e-102  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  44.27 
 
 
586 aa  375  1e-102  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_012880  Dd703_3865  methyl-accepting chemotaxis sensory transducer  42.83 
 
 
551 aa  374  1e-102  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2862  methyl-accepting chemotaxis protein  67.46 
 
 
546 aa  373  1e-102  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2891  methyl-accepting chemotaxis sensory transducer  53.08 
 
 
521 aa  375  1e-102  Burkholderia ambifaria AMMD  Bacteria  normal  0.657214  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  46.11 
 
 
580 aa  374  1e-102  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  67.46 
 
 
546 aa  373  1e-102  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0157  methyl-accepting chemotaxis protein  67.46 
 
 
546 aa  373  1e-102  Burkholderia mallei SAVP1  Bacteria  normal  0.293853  n/a   
 
 
-
 
NC_007510  Bcep18194_A4589  methyl-accepting chemotaxis sensory transducer  48.7 
 
 
557 aa  370  1e-101  Burkholderia sp. 383  Bacteria  normal  0.17969  normal 
 
 
-
 
NC_007510  Bcep18194_A6164  methyl-accepting chemotaxis sensory transducer  51.77 
 
 
544 aa  371  1e-101  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  64.31 
 
 
578 aa  371  1e-101  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  55.42 
 
 
532 aa  372  1e-101  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  46.12 
 
 
597 aa  371  1e-101  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  67.16 
 
 
546 aa  372  1e-101  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  47.54 
 
 
617 aa  368  1e-100  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  44.93 
 
 
583 aa  367  1e-100  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  53.64 
 
 
580 aa  368  1e-100  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1091  methyl-accepting chemotaxis sensory transducer with Cache sensor  67.28 
 
 
618 aa  367  1e-100  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  44.8 
 
 
570 aa  365  1e-99  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_007974  Rmet_3682  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  74.16 
 
 
552 aa  365  1e-99  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0302709 
 
 
-
 
NC_013421  Pecwa_0495  methyl-accepting chemotaxis sensory transducer  42.88 
 
 
525 aa  363  5.0000000000000005e-99  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  62.75 
 
 
541 aa  363  5.0000000000000005e-99  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  47.79 
 
 
522 aa  363  5.0000000000000005e-99  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  47.79 
 
 
522 aa  363  5.0000000000000005e-99  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  58.02 
 
 
559 aa  363  7.0000000000000005e-99  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007348  Reut_B5230  methyl-accepting chemotaxis sensory transducer  67.1 
 
 
518 aa  362  8e-99  Ralstonia eutropha JMP134  Bacteria  normal  0.530292  n/a   
 
 
-
 
NC_003295  RSc1155  methyl-accepting chemotaxis transducer transmembrane protein  65.85 
 
 
629 aa  361  2e-98  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.852924 
 
 
-
 
NC_010508  Bcenmc03_2845  methyl-accepting chemotaxis sensory transducer  66.09 
 
 
545 aa  361  2e-98  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.788597  normal 
 
 
-
 
NC_010084  Bmul_0469  methyl-accepting chemotaxis sensory transducer  70.68 
 
 
549 aa  361  2e-98  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  46.9 
 
 
513 aa  360  5e-98  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_2221  methyl-accepting chemotaxis sensory transducer  66.09 
 
 
545 aa  360  5e-98  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2834  methyl-accepting chemotaxis sensory transducer  66.09 
 
 
545 aa  360  5e-98  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  46.46 
 
 
618 aa  359  9e-98  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_012880  Dd703_3863  methyl-accepting chemotaxis sensory transducer  41.78 
 
 
560 aa  358  9.999999999999999e-98  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_4084  methyl-accepting chemotaxis sensory transducer  41.34 
 
 
555 aa  358  9.999999999999999e-98  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  44.01 
 
 
575 aa  358  1.9999999999999998e-97  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_009075  BURPS668_A2764  methyl-accepting chemotaxis protein  44.54 
 
 
562 aa  358  1.9999999999999998e-97  Burkholderia pseudomallei 668  Bacteria  normal  0.627836  n/a   
 
 
-
 
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