More than 300 homologs were found in PanDaTox collection
for query gene Bphyt_4117 on replicon NC_010676
Organism: Burkholderia phytofirmans PsJN



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007435  BURPS1710b_A1043  putative methyl-accepting chemotaxis transducer transmembrane protein  61.61 
 
 
521 aa  635    Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_5380  methyl-accepting chemotaxis sensory transducer  74.23 
 
 
524 aa  719    Burkholderia phymatum STM815  Bacteria  normal  0.653994  normal  0.987419 
 
 
-
 
NC_010676  Bphyt_4117  methyl-accepting chemotaxis sensory transducer  100 
 
 
545 aa  1090    Burkholderia phytofirmans PsJN  Bacteria  normal  0.36552  normal 
 
 
-
 
NC_009078  BURPS1106A_A2638  methyl-accepting chemotaxis protein  61.61 
 
 
521 aa  635    Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2780  methyl-accepting chemotaxis protein  61.61 
 
 
521 aa  635    Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1305  putative methyl-accepting chemotaxis protein  60.82 
 
 
485 aa  580  1e-164  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0161  putative methyl-accepting chemotaxis protein  60.82 
 
 
485 aa  580  1e-164  Burkholderia mallei NCTC 10247  Bacteria  normal  0.573068  n/a   
 
 
-
 
NC_006349  BMAA0135  putative methyl-accepting chemotaxis protein  59.56 
 
 
456 aa  532  1e-150  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1091  methyl-accepting chemotaxis sensory transducer with Cache sensor  51.25 
 
 
618 aa  481  1e-134  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  50.38 
 
 
621 aa  477  1e-133  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_003295  RSc1155  methyl-accepting chemotaxis transducer transmembrane protein  50.78 
 
 
629 aa  464  1e-129  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.852924 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  49.61 
 
 
513 aa  452  1.0000000000000001e-126  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  49.52 
 
 
515 aa  452  1.0000000000000001e-126  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  49.61 
 
 
513 aa  452  1.0000000000000001e-126  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  48.84 
 
 
513 aa  445  1.0000000000000001e-124  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  46.1 
 
 
585 aa  448  1.0000000000000001e-124  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  47.2 
 
 
519 aa  448  1.0000000000000001e-124  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4450  methyl-accepting chemotaxis sensory transducer  47.39 
 
 
519 aa  441  9.999999999999999e-123  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000313766  normal 
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  46.11 
 
 
519 aa  440  9.999999999999999e-123  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  48.16 
 
 
521 aa  432  1e-120  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0557  methyl-accepting chemotaxis sensory transducer  47.34 
 
 
627 aa  432  1e-120  Burkholderia phytofirmans PsJN  Bacteria  normal  0.191348  normal  0.480006 
 
 
-
 
NC_008390  Bamb_2891  methyl-accepting chemotaxis sensory transducer  48.36 
 
 
521 aa  433  1e-120  Burkholderia ambifaria AMMD  Bacteria  normal  0.657214  n/a   
 
 
-
 
NC_009076  BURPS1106A_0520  methyl-accepting chemotaxis protein  48.45 
 
 
546 aa  431  1e-119  Burkholderia pseudomallei 1106a  Bacteria  normal  0.640738  n/a   
 
 
-
 
NC_007348  Reut_B5230  methyl-accepting chemotaxis sensory transducer  46.78 
 
 
518 aa  429  1e-119  Ralstonia eutropha JMP134  Bacteria  normal  0.530292  n/a   
 
 
-
 
NC_009080  BMA10247_2862  methyl-accepting chemotaxis protein  48.45 
 
 
546 aa  431  1e-119  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0157  methyl-accepting chemotaxis protein  48.45 
 
 
546 aa  431  1e-119  Burkholderia mallei SAVP1  Bacteria  normal  0.293853  n/a   
 
 
-
 
NC_007951  Bxe_A4159  methyl-accepting chemotaxis sensory transducer  47.63 
 
 
611 aa  429  1e-119  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2784  methyl-accepting chemotaxis sensory transducer  47.49 
 
 
542 aa  429  1e-119  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  48.45 
 
 
546 aa  431  1e-119  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  48.45 
 
 
546 aa  431  1e-119  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3227  methyl-accepting chemotaxis sensory transducer  47.09 
 
 
518 aa  426  1e-118  Burkholderia phymatum STM815  Bacteria  normal  0.543154  normal 
 
 
-
 
NC_010676  Bphyt_6769  methyl-accepting chemotaxis sensory transducer  48.46 
 
 
519 aa  428  1e-118  Burkholderia phytofirmans PsJN  Bacteria  normal  0.176172  normal  0.340215 
 
 
-
 
NC_007510  Bcep18194_A6164  methyl-accepting chemotaxis sensory transducer  46.93 
 
 
544 aa  423  1e-117  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3823  methyl-accepting chemotaxis sensory transducer  46.3 
 
 
513 aa  425  1e-117  Burkholderia phymatum STM815  Bacteria  normal  normal  0.793143 
 
 
-
 
NC_008060  Bcen_2221  methyl-accepting chemotaxis sensory transducer  47.34 
 
 
545 aa  421  1e-116  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2834  methyl-accepting chemotaxis sensory transducer  47.34 
 
 
545 aa  421  1e-116  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0469  methyl-accepting chemotaxis sensory transducer  47.95 
 
 
549 aa  416  9.999999999999999e-116  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_6172  methyl-accepting chemotaxis sensory transducer  49.22 
 
 
542 aa  416  9.999999999999999e-116  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_2845  methyl-accepting chemotaxis sensory transducer  47.13 
 
 
545 aa  417  9.999999999999999e-116  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.788597  normal 
 
 
-
 
NC_007434  BURPS1710b_0685  methyl-accepting chemotaxis protein  48.39 
 
 
526 aa  412  1e-114  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1028  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.37 
 
 
532 aa  412  1e-114  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  47.76 
 
 
598 aa  410  1e-113  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_007651  BTH_I0438  methyl-accepting chemotaxis protein  48.96 
 
 
512 aa  409  1e-113  Burkholderia thailandensis E264  Bacteria  normal  0.212381  n/a   
 
 
-
 
NC_009075  BURPS668_A1710  methyl-accepting chemotaxis protein  45.75 
 
 
517 aa  409  1e-113  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1623  methyl-accepting chemotaxis protein  45.75 
 
 
517 aa  409  1e-113  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.37 
 
 
566 aa  405  1.0000000000000001e-112  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_006348  BMA3184  methyl-accepting chemotaxis protein  49.16 
 
 
511 aa  404  1e-111  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  44.4 
 
 
520 aa  403  1e-111  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3031  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.6 
 
 
529 aa  404  1e-111  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  44.55 
 
 
541 aa  405  1e-111  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_010676  Bphyt_6518  methyl-accepting chemotaxis sensory transducer  44.89 
 
 
514 aa  399  9.999999999999999e-111  Burkholderia phytofirmans PsJN  Bacteria  normal  0.73924  normal 
 
 
-
 
NC_008391  Bamb_4204  methyl-accepting chemotaxis sensory transducer  44.4 
 
 
517 aa  399  9.999999999999999e-111  Burkholderia ambifaria AMMD  Bacteria  normal  0.305878  normal 
 
 
-
 
NC_010086  Bmul_3780  methyl-accepting chemotaxis sensory transducer  44.4 
 
 
517 aa  402  9.999999999999999e-111  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0330596 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.54 
 
 
515 aa  399  1e-109  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  45.54 
 
 
515 aa  398  1e-109  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  44.29 
 
 
544 aa  397  1e-109  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_007974  Rmet_5935  methyl-accepting chemotaxis sensory transducer  44.4 
 
 
520 aa  397  1e-109  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_5460  methyl-accepting chemotaxis sensory transducer  43.63 
 
 
517 aa  392  1e-108  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.601436  normal  0.166688 
 
 
-
 
NC_007511  Bcep18194_B0881  methyl-accepting chemotaxis sensory transducer  43.82 
 
 
517 aa  394  1e-108  Burkholderia sp. 383  Bacteria  normal  normal  0.284562 
 
 
-
 
NC_007952  Bxe_B2237  methyl-accepting chemotaxis sensory transducer  44.94 
 
 
513 aa  394  1e-108  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4727  methyl-accepting chemotaxis sensory transducer  44.02 
 
 
517 aa  392  1e-108  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.308358 
 
 
-
 
NC_007650  BTH_II1198  methyl-accepting chemotaxis protein  47.1 
 
 
482 aa  390  1e-107  Burkholderia thailandensis E264  Bacteria  normal  0.311579  n/a   
 
 
-
 
NC_008061  Bcen_3544  methyl-accepting chemotaxis sensory transducer  43.24 
 
 
541 aa  390  1e-107  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.256262  n/a   
 
 
-
 
NC_008543  Bcen2424_4823  methyl-accepting chemotaxis sensory transducer  43.24 
 
 
541 aa  390  1e-107  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.224381 
 
 
-
 
NC_010676  Bphyt_6000  methyl-accepting chemotaxis sensory transducer  44.36 
 
 
513 aa  387  1e-106  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.292044 
 
 
-
 
NC_007435  BURPS1710b_A0212  methyl-accepting chemotaxis protein  48.37 
 
 
464 aa  386  1e-106  Burkholderia pseudomallei 1710b  Bacteria  normal  0.387539  n/a   
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  44.96 
 
 
515 aa  384  1e-105  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  44.22 
 
 
585 aa  370  1e-101  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  44.16 
 
 
587 aa  357  1.9999999999999998e-97  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_010002  Daci_4414  methyl-accepting chemotaxis sensory transducer  45.02 
 
 
518 aa  357  2.9999999999999997e-97  Delftia acidovorans SPH-1  Bacteria  normal  0.684904  normal 
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.02 
 
 
579 aa  354  2e-96  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_011992  Dtpsy_0353  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.58 
 
 
564 aa  352  1e-95  Acidovorax ebreus TPSY  Bacteria  normal  0.244374  n/a   
 
 
-
 
NC_008782  Ajs_3664  methyl-accepting chemotaxis sensory transducer  41.25 
 
 
598 aa  349  7e-95  Acidovorax sp. JS42  Bacteria  normal  0.197645  normal 
 
 
-
 
NC_007509  Bcep18194_C7598  methyl-accepting chemotaxis sensory transducer  44.66 
 
 
552 aa  341  2e-92  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_4331  methyl-accepting chemotaxis sensory transducer  41.94 
 
 
534 aa  338  1.9999999999999998e-91  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.555356 
 
 
-
 
NC_012917  PC1_1797  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.54 
 
 
519 aa  335  1e-90  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.00249048  n/a   
 
 
-
 
NC_013421  Pecwa_2070  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.15 
 
 
519 aa  334  3e-90  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  42.11 
 
 
584 aa  330  3e-89  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.71 
 
 
584 aa  329  1.0000000000000001e-88  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_012560  Avin_24360  chemotaxis sensory transducer  39.77 
 
 
544 aa  323  4e-87  Azotobacter vinelandii DJ  Bacteria  normal  0.249262  n/a   
 
 
-
 
NC_010086  Bmul_4779  methyl-accepting chemotaxis sensory transducer  39.64 
 
 
506 aa  323  7e-87  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1719  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.28 
 
 
517 aa  321  3e-86  Dickeya dadantii Ech703  Bacteria  unclonable  0.00000712436  n/a   
 
 
-
 
NC_012880  Dd703_2488  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.34 
 
 
512 aa  314  2.9999999999999996e-84  Dickeya dadantii Ech703  Bacteria  normal  0.0783891  n/a   
 
 
-
 
NC_010625  Bphy_5545  methyl-accepting chemotaxis sensory transducer  42.21 
 
 
512 aa  313  4.999999999999999e-84  Burkholderia phymatum STM815  Bacteria  normal  normal  0.857112 
 
 
-
 
NC_013421  Pecwa_0106  methyl-accepting chemotaxis sensory transducer  48.3 
 
 
556 aa  308  1.0000000000000001e-82  Pectobacterium wasabiae WPP163  Bacteria  normal  0.405526  n/a   
 
 
-
 
NC_012917  PC1_0112  methyl-accepting chemotaxis sensory transducer  52 
 
 
556 aa  308  2.0000000000000002e-82  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  53.27 
 
 
594 aa  301  3e-80  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  43.54 
 
 
558 aa  297  3e-79  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4495  methyl-accepting chemotaxis sensory transducer  53.09 
 
 
605 aa  296  5e-79  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0928828 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  52.68 
 
 
579 aa  296  7e-79  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  55.08 
 
 
559 aa  295  2e-78  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  54.79 
 
 
613 aa  294  3e-78  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_008392  Bamb_6352  methyl-accepting chemotaxis sensory transducer  42.94 
 
 
512 aa  294  3e-78  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4446  methyl-accepting chemotaxis sensory transducer  52.47 
 
 
605 aa  294  3e-78  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0260008  normal  0.622584 
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  52.79 
 
 
597 aa  293  4e-78  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4524  methyl-accepting chemotaxis sensory transducer  52.22 
 
 
599 aa  293  5e-78  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0113  methyl-accepting chemotaxis sensory transducer  52.41 
 
 
559 aa  293  6e-78  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  49.25 
 
 
573 aa  293  7e-78  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_007947  Mfla_0352  methyl-accepting chemotaxis sensory transducer  48.73 
 
 
649 aa  291  1e-77  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.127099 
 
 
-
 
NC_013421  Pecwa_0107  methyl-accepting chemotaxis sensory transducer  51.13 
 
 
559 aa  292  1e-77  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
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