More than 300 homologs were found in PanDaTox collection
for query gene Bamb_6352 on replicon NC_008392
Organism: Burkholderia ambifaria AMMD



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010557  BamMC406_6056  methyl-accepting chemotaxis sensory transducer  99.02 
 
 
512 aa  1000    Burkholderia ambifaria MC40-6  Bacteria  normal  0.301677  normal 
 
 
-
 
NC_010512  Bcenmc03_6278  methyl-accepting chemotaxis sensory transducer  96.48 
 
 
512 aa  864    Burkholderia cenocepacia MC0-3  Bacteria  normal  0.236466  normal  0.246568 
 
 
-
 
NC_008062  Bcen_6446  methyl-accepting chemotaxis sensory transducer  96.48 
 
 
512 aa  865    Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008392  Bamb_6352  methyl-accepting chemotaxis sensory transducer  100 
 
 
512 aa  1009    Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008544  Bcen2424_6681  methyl-accepting chemotaxis sensory transducer  96.48 
 
 
512 aa  865    Burkholderia cenocepacia HI2424  Bacteria  normal  0.292072  normal 
 
 
-
 
NC_010625  Bphy_5545  methyl-accepting chemotaxis sensory transducer  63.21 
 
 
512 aa  590  1e-167  Burkholderia phymatum STM815  Bacteria  normal  normal  0.857112 
 
 
-
 
NC_012880  Dd703_2488  methyl-accepting chemotaxis sensory transducer with Cache sensor  58.87 
 
 
512 aa  587  1e-166  Dickeya dadantii Ech703  Bacteria  normal  0.0783891  n/a   
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  47.23 
 
 
519 aa  395  1e-109  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2070  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.18 
 
 
519 aa  395  1e-109  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1797  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.18 
 
 
519 aa  393  1e-108  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.00249048  n/a   
 
 
-
 
NC_010676  Bphyt_4450  methyl-accepting chemotaxis sensory transducer  47.23 
 
 
519 aa  390  1e-107  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000313766  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  48.13 
 
 
585 aa  386  1e-106  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_007951  Bxe_A4159  methyl-accepting chemotaxis sensory transducer  47.17 
 
 
611 aa  382  1e-105  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0557  methyl-accepting chemotaxis sensory transducer  48.13 
 
 
627 aa  384  1e-105  Burkholderia phytofirmans PsJN  Bacteria  normal  0.191348  normal  0.480006 
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  47.35 
 
 
521 aa  382  1e-105  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.83 
 
 
579 aa  379  1e-104  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_008390  Bamb_2891  methyl-accepting chemotaxis sensory transducer  47.54 
 
 
521 aa  382  1e-104  Burkholderia ambifaria AMMD  Bacteria  normal  0.657214  n/a   
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  50.1 
 
 
546 aa  379  1e-104  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0157  methyl-accepting chemotaxis protein  50.1 
 
 
546 aa  378  1e-103  Burkholderia mallei SAVP1  Bacteria  normal  0.293853  n/a   
 
 
-
 
NC_009080  BMA10247_2862  methyl-accepting chemotaxis protein  50.1 
 
 
546 aa  378  1e-103  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  49.14 
 
 
566 aa  378  1e-103  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_008782  Ajs_3664  methyl-accepting chemotaxis sensory transducer  43.64 
 
 
598 aa  375  1e-103  Acidovorax sp. JS42  Bacteria  normal  0.197645  normal 
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  50.1 
 
 
546 aa  378  1e-103  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
NC_012856  Rpic12D_1091  methyl-accepting chemotaxis sensory transducer with Cache sensor  47 
 
 
618 aa  375  1e-103  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_0520  methyl-accepting chemotaxis protein  50.1 
 
 
546 aa  378  1e-103  Burkholderia pseudomallei 1106a  Bacteria  normal  0.640738  n/a   
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  44.53 
 
 
520 aa  373  1e-102  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  46.2 
 
 
621 aa  373  1e-102  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_007510  Bcep18194_A6164  methyl-accepting chemotaxis sensory transducer  46.78 
 
 
544 aa  373  1e-102  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1719  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.73 
 
 
517 aa  373  1e-102  Dickeya dadantii Ech703  Bacteria  unclonable  0.00000712436  n/a   
 
 
-
 
NC_007434  BURPS1710b_0685  methyl-accepting chemotaxis protein  50.89 
 
 
526 aa  370  1e-101  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0438  methyl-accepting chemotaxis protein  50.21 
 
 
512 aa  370  1e-101  Burkholderia thailandensis E264  Bacteria  normal  0.212381  n/a   
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  47.42 
 
 
598 aa  370  1e-101  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  47.46 
 
 
515 aa  367  1e-100  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_006348  BMA3184  methyl-accepting chemotaxis protein  51.24 
 
 
511 aa  368  1e-100  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  45.88 
 
 
515 aa  367  1e-100  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.88 
 
 
515 aa  367  1e-100  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  44.64 
 
 
541 aa  366  1e-100  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_012880  Dd703_1028  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.34 
 
 
532 aa  363  3e-99  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2845  methyl-accepting chemotaxis sensory transducer  46.78 
 
 
545 aa  363  5.0000000000000005e-99  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.788597  normal 
 
 
-
 
NC_010084  Bmul_0469  methyl-accepting chemotaxis sensory transducer  47.35 
 
 
549 aa  362  9e-99  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  48.14 
 
 
513 aa  360  2e-98  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_008060  Bcen_2221  methyl-accepting chemotaxis sensory transducer  46.59 
 
 
545 aa  361  2e-98  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2834  methyl-accepting chemotaxis sensory transducer  46.59 
 
 
545 aa  361  2e-98  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1155  methyl-accepting chemotaxis transducer transmembrane protein  46.86 
 
 
629 aa  360  5e-98  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.852924 
 
 
-
 
NC_007974  Rmet_5935  methyl-accepting chemotaxis sensory transducer  47.02 
 
 
520 aa  358  1.9999999999999998e-97  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  58.72 
 
 
573 aa  357  3.9999999999999996e-97  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  47.7 
 
 
513 aa  356  5.999999999999999e-97  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  47.7 
 
 
513 aa  356  5.999999999999999e-97  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  45.16 
 
 
519 aa  356  5.999999999999999e-97  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6000  methyl-accepting chemotaxis sensory transducer  46.3 
 
 
513 aa  355  1e-96  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.292044 
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  58.43 
 
 
558 aa  355  1e-96  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  45.51 
 
 
515 aa  351  2e-95  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_010524  Lcho_4331  methyl-accepting chemotaxis sensory transducer  44.79 
 
 
534 aa  350  4e-95  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.555356 
 
 
-
 
NC_007952  Bxe_B2237  methyl-accepting chemotaxis sensory transducer  44.11 
 
 
513 aa  350  4e-95  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6518  methyl-accepting chemotaxis sensory transducer  44.19 
 
 
514 aa  350  5e-95  Burkholderia phytofirmans PsJN  Bacteria  normal  0.73924  normal 
 
 
-
 
NC_010086  Bmul_3780  methyl-accepting chemotaxis sensory transducer  45.49 
 
 
517 aa  347  2e-94  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0330596 
 
 
-
 
NC_010623  Bphy_3227  methyl-accepting chemotaxis sensory transducer  43.76 
 
 
518 aa  348  2e-94  Burkholderia phymatum STM815  Bacteria  normal  0.543154  normal 
 
 
-
 
NC_010623  Bphy_3823  methyl-accepting chemotaxis sensory transducer  44.25 
 
 
513 aa  347  3e-94  Burkholderia phymatum STM815  Bacteria  normal  normal  0.793143 
 
 
-
 
NC_008391  Bamb_4204  methyl-accepting chemotaxis sensory transducer  45.61 
 
 
517 aa  346  6e-94  Burkholderia ambifaria AMMD  Bacteria  normal  0.305878  normal 
 
 
-
 
NC_010515  Bcenmc03_5460  methyl-accepting chemotaxis sensory transducer  45.06 
 
 
517 aa  344  2e-93  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.601436  normal  0.166688 
 
 
-
 
NC_010552  BamMC406_4727  methyl-accepting chemotaxis sensory transducer  44.76 
 
 
517 aa  344  2e-93  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.308358 
 
 
-
 
NC_007511  Bcep18194_B0881  methyl-accepting chemotaxis sensory transducer  44.78 
 
 
517 aa  341  2e-92  Burkholderia sp. 383  Bacteria  normal  normal  0.284562 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  42.55 
 
 
587 aa  340  2e-92  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_007348  Reut_B5230  methyl-accepting chemotaxis sensory transducer  44.68 
 
 
518 aa  340  4e-92  Ralstonia eutropha JMP134  Bacteria  normal  0.530292  n/a   
 
 
-
 
NC_008061  Bcen_3544  methyl-accepting chemotaxis sensory transducer  44.57 
 
 
541 aa  340  4e-92  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.256262  n/a   
 
 
-
 
NC_008543  Bcen2424_4823  methyl-accepting chemotaxis sensory transducer  44.57 
 
 
541 aa  340  4e-92  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.224381 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  46.79 
 
 
585 aa  340  5e-92  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_010622  Bphy_1586  methyl-accepting chemotaxis sensory transducer  57.73 
 
 
553 aa  336  5e-91  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_6172  methyl-accepting chemotaxis sensory transducer  46.79 
 
 
542 aa  335  1e-90  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  43.71 
 
 
544 aa  335  1e-90  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_009075  BURPS668_A1710  methyl-accepting chemotaxis protein  44.49 
 
 
517 aa  334  2e-90  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1623  methyl-accepting chemotaxis protein  44.49 
 
 
517 aa  334  2e-90  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2784  methyl-accepting chemotaxis sensory transducer  44.72 
 
 
542 aa  333  3e-90  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  58.54 
 
 
573 aa  333  4e-90  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_010623  Bphy_5380  methyl-accepting chemotaxis sensory transducer  43.49 
 
 
524 aa  333  4e-90  Burkholderia phymatum STM815  Bacteria  normal  0.653994  normal  0.987419 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.59 
 
 
584 aa  332  9e-90  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_010622  Bphy_0137  methyl-accepting chemotaxis sensory transducer  53.02 
 
 
515 aa  331  2e-89  Burkholderia phymatum STM815  Bacteria  normal  0.5368  normal 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  42.21 
 
 
584 aa  328  1.0000000000000001e-88  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  53.98 
 
 
584 aa  328  2.0000000000000001e-88  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_010676  Bphyt_6769  methyl-accepting chemotaxis sensory transducer  44.62 
 
 
519 aa  323  6e-87  Burkholderia phytofirmans PsJN  Bacteria  normal  0.176172  normal  0.340215 
 
 
-
 
NC_010512  Bcenmc03_6305  methyl-accepting chemotaxis sensory transducer  60.59 
 
 
528 aa  323  6e-87  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4117  methyl-accepting chemotaxis sensory transducer  41.12 
 
 
545 aa  323  6e-87  Burkholderia phytofirmans PsJN  Bacteria  normal  0.36552  normal 
 
 
-
 
NC_008062  Bcen_6464  methyl-accepting chemotaxis sensory transducer  60.59 
 
 
528 aa  323  6e-87  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6699  methyl-accepting chemotaxis sensory transducer  60.59 
 
 
528 aa  323  6e-87  Burkholderia cenocepacia HI2424  Bacteria  normal  0.971949  normal  0.6752 
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  58.46 
 
 
576 aa  321  1.9999999999999998e-86  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_008825  Mpe_A2548  methyl-accepting chemotaxis protein  56.67 
 
 
525 aa  321  3e-86  Methylibium petroleiphilum PM1  Bacteria  decreased coverage  0.00975221  normal  0.500866 
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  55.69 
 
 
555 aa  320  3.9999999999999996e-86  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  62.21 
 
 
594 aa  320  3.9999999999999996e-86  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  56.41 
 
 
589 aa  320  5e-86  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  58.58 
 
 
597 aa  319  6e-86  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  58.2 
 
 
586 aa  319  7.999999999999999e-86  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_010676  Bphyt_6645  methyl-accepting chemotaxis sensory transducer  59.35 
 
 
583 aa  319  1e-85  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.983597 
 
 
-
 
NC_007650  BTH_II1198  methyl-accepting chemotaxis protein  45.92 
 
 
482 aa  318  2e-85  Burkholderia thailandensis E264  Bacteria  normal  0.311579  n/a   
 
 
-
 
NC_010625  Bphy_5592  methyl-accepting chemotaxis sensory transducer  57.1 
 
 
567 aa  317  2e-85  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  57.26 
 
 
579 aa  317  3e-85  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  56.59 
 
 
579 aa  317  5e-85  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  54.3 
 
 
562 aa  315  8e-85  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  57.19 
 
 
532 aa  315  8e-85  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_007651  BTH_I2374  methyl-accepting chemotaxis protein  60 
 
 
586 aa  315  9.999999999999999e-85  Burkholderia thailandensis E264  Bacteria  normal  0.205822  n/a   
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  60.13 
 
 
575 aa  315  9.999999999999999e-85  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>