Gene Bcenmc03_6278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6278 
Symbol 
ID6125204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp280622 
End bp282160 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content68% 
IMG OID641647294 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001773891 
Protein GI170734777 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.236466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.246568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTGT CCACCAAACT GCTGATGCTC GTCGTCGCGG CGCTGCTCGG TATCGTCCTG 
CTCGCCGCGT TGTCGCTGCA TACGCTGCGC GACGCGCTGA TCGACAGCCG CCGCGAAGAG
ATCGTCATTC TGCTGACCAA GGCCGAGCAT CTGGTCGATT CGTATCGCGC GATGCAGACG
AGCGGCACGC TCACGCAGGA GCAGGCGCAG CAGCAGGCCA AGGCCGCGCT GGCGGCGCTC
AACGCGAATT CGAAGAGCTA CTTCTGGGTC ACGACGTCCG ACGGCGTCAA CCTCGTCCAT
CCGAACGCGA AGTTCATCGG CACGCGCGCG AAGGGCAACC GCACGACCAG CGGCATGACC
GACAGCGAGG CGTACCGCGC GGGCATGGCG CAGGCGCATT TCGCGCTCGT CGACGTGCTG
ATCAAGCGCA GCCCCGACGC GGATCTCGAG CCGAAGCTGC AGGGCGTGGT CGCGATTCCG
GACTGGGACT GGTGGATCGG CACGGGATTC TTCTACGACG ACATCAATGC GGCGTTTACC
CGGCTCGCGA CGGTGCTGGG CATCGTCACG CTCGTCATCG CCGCGGCGCT CGCGGCGATT
GCGTGGGGGG TGCTGCGCAG CGTCAGGCGC ACGCTCGGCG GGGAGCCCGC GCAGGCGGCG
CAGATCGCGG CCCGCATCGC CGCCGGAGAA CTGGACGTGC AGTTCGATAC GGCGCACGCC
GCGCCCGGCA GCCTGCTCGT CGCGCTGGGC GACATGAAGG CGCGGCTGAC CGACACCATC
GCCGAAATCC AGACCACGAC CCACTCGATC GCCACCGGCA CCGGCGAGAT CGCGCAAGGC
AACCTGGATC TGTCGCAGCG CACGGAGCAG CAGGCCGCGT CGCTGCAGGA GACGGCCGCG
AGCATGGAGC AGATGACGTC CACGGTCAAA CAGAACGCCG ACAACGCGCG CCAGGCGAAT
GCGCTCGTGA CCCAGGCGAA GGATGCGACC GAACTGGGCG GCGCCGCCGT GCAGGCGGTC
GTCGAGACGA TGCGGCAGAT CTCGGATGGA TCGGTGCGGA TCGCCGACAT TACCGTCGTC
ATCGAAAGCA TCGCATTCCA GACCAACATC CTGGCGCTCA ACGCCGCGGT GGAAGCCGCG
CGGGCCGGCG AGGAGGGGCG CGGGTTCGCC GTCGTCGCAT CGGAAGTCCG CTCGCTCGCG
CAACGCAGCG CCGCGGCCGC GAAGGACATC AAGGGATTGA TCGACGCGTC GGTCGAGCGG
GCCGGCAGCG GCAGCCGGCT CGTCGAGACG GCCGGTGAGC GCATGACGGA GATCGTCCGG
TCGATCGACC GGGTGGCCGA CATCATGGGC GAGATTTCGG CGGCATCGGT CGAGCAAAGC
ACCGGCATCG AACAGATCGG GCTGGCGGTT GCGCAAATGG ACGAAGTCAC CCAGCAGAAC
GCCGCGCTCG TCGAGCAGGC GGCCGCCGCA GCATCGTCGC TGGACGAACA GGCGGCGCGC
CTGCGGGCCG CCGTGTCGGT ATTCCGGCTC GCTGCGTGA
 
Protein sequence
MKLSTKLLML VVAALLGIVL LAALSLHTLR DALIDSRREE IVILLTKAEH LVDSYRAMQT 
SGTLTQEQAQ QQAKAALAAL NANSKSYFWV TTSDGVNLVH PNAKFIGTRA KGNRTTSGMT
DSEAYRAGMA QAHFALVDVL IKRSPDADLE PKLQGVVAIP DWDWWIGTGF FYDDINAAFT
RLATVLGIVT LVIAAALAAI AWGVLRSVRR TLGGEPAQAA QIAARIAAGE LDVQFDTAHA
APGSLLVALG DMKARLTDTI AEIQTTTHSI ATGTGEIAQG NLDLSQRTEQ QAASLQETAA
SMEQMTSTVK QNADNARQAN ALVTQAKDAT ELGGAAVQAV VETMRQISDG SVRIADITVV
IESIAFQTNI LALNAAVEAA RAGEEGRGFA VVASEVRSLA QRSAAAAKDI KGLIDASVER
AGSGSRLVET AGERMTEIVR SIDRVADIMG EISAASVEQS TGIEQIGLAV AQMDEVTQQN
AALVEQAAAA ASSLDEQAAR LRAAVSVFRL AA