Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0995 |
Symbol | |
ID | 6287847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1052641 |
End bp | 1054506 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642624563 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001898575 |
Protein GI | 187928088 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein [COG4564] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.203772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAGC TCAGCTTTCG CCAAAAGCTT TGGCTGCCGC TGATCATCAG CCTTGTCGCG CTGACCTTGA TCTCGGTATT CAACGCGTAT CAGGCGCGCG AGATCCGCGT CGAGGAGCGC AAGAACAACC TCGTCAGCGT GACGACCATG GCCGTGAACC TGGTCAAGCA ATATGACGAC CTGACCAAGA ACGGCACGTT GAGCAAAGAC GCCGCGCAGA AAGAGGCGCT CGACCGCTTC AAGGCGCTGC GCTACGACAA GGACGGCTAC TTCACCATCA CCAGCTCCAA CAACGTGGTG GTGATGCACC CGATCAAGCC CGAGTTCATC GGCAAGGACC AATCCGGCTT CAAGGACGCA CAGGGCAATG CCGTCTACGT GGGCTTGTCC AACGCGGCCA AAGATCCGAA GGGCGGATTC ACCAGCTATG TGTGGCCGAA AGTCGGCGGC TCGGAGCCGG TGCCCAAGAC GGCTTTCGCG ATGCGCTATG AGCCGTGGGA CTGGGTCTTC TCGACCGGCG TCTACATGGA CGACATCAAT GCCGCGTTCA TGACTTCGCT GTACCAAACC GGCGGGCTGC TGGTATTGGT CGGCGGTTTG CTGTTGCTGC TGGGCGGCGT CGCGAACCGC AGCCTGCAGC GCACGCTGGG CGGCGACCCC GCCTACGCGG CTGATGTGGC CAACCGCATT GCCGGCGGTG ACCTGACGCT GGAGATTGCC ACCCGCGCCG ACGACAACAA CAGCCTGCTC TACGCCATGA GCCGCATGCG CGGCGCGCTG GTGGACACCA TCGGCCGCAT CAAGGGCGCG TCGGAGACCA TCGGCACCGC CACGCGCGAA ATCGCCAGCG GCAACCTGGA TCTGTCGTCG CGCACCGAGC AGCAGGCCAG CTCGCTGGAA GAAACGGCTT CGGCCATGGA GCAGCTGATG TCGACCGTGC AGCAGAACGC CGACAACGCC CAGCAGGCCA ACCAGTTGGC CGCGTCCGCC TCGGATGTGG CCGTGCGCGG CGGCGACGTG GTGACGCGCG TGGTGGAAAC CATGGGCTCA ATCAACGCGT CGTCACGCAA GATCGTCGAC ATCATCGGCG TGATTGATGG CATTGCGTTC CAGACGAACA TCCTTGCACT CAATGCGGCA GTCGAAGCCG CGCGTGCGGG GGAACAGGGC CGTGGTTTTG CTGTGGTGGC CGGTGAGGTG CGCAGCCTTG CGCAACGCAG CGCGGCTGCC GCCAAAGAGA TCAAGGCGCT GATCGATGAT TCCGTCGTCA ACGTGGATGC AGGCAGCGCG CTGGTGGAAG AAGCCGGCAC GACCATGCGG GAGATCGTCG CGAGCGTGAA GCGCGTGACC GACATCGTTG GCGAGATTTC GTCGGCCAGC CAGGAACAGC GCTCCGGCAT TGAAGAAGTG AGCCACGCCG TCACGCAGCT TGACGACGCC ACGCAGCAGA ACGCTGCGCT GGTGGAGCAG GCCGCTGCTG CTGCGCAATC GCTGGAAGAG CAGGCCGTGA GCCTGACGCA GGTGGTGGCG CAGTTCCGCC TCGATGCGCA TGCGCTGCGT GCGCCGGCCA TGGTGGCGCG GGTTGAGCCG GCTGTTGCGC CGGTCAAGCC CGTGGCACTC GCAACGCCGA TGGCACCGGC ATCACCCAAG GACGAAGCGC CGCGGCGCGG GGCCGCCAGG CCGAGCACCG AAGCTGCCAA GCCCAAGCTG ACGTCGCGCA AGCCGCCTGT GTTGCGAAAG GCTGCTGCCA AGCCGGTCGA GCGAACCGAA AAGAGCCTGG CTGCACCGGC AGCGATACCC GCGAGCCTGG CCAAGGCGAA GCCTCTGGTC GCCGCTGGAG ACAACGCTGA CTGGGAAACG TTCTGA
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Protein sequence | MSKLSFRQKL WLPLIISLVA LTLISVFNAY QAREIRVEER KNNLVSVTTM AVNLVKQYDD LTKNGTLSKD AAQKEALDRF KALRYDKDGY FTITSSNNVV VMHPIKPEFI GKDQSGFKDA QGNAVYVGLS NAAKDPKGGF TSYVWPKVGG SEPVPKTAFA MRYEPWDWVF STGVYMDDIN AAFMTSLYQT GGLLVLVGGL LLLLGGVANR SLQRTLGGDP AYAADVANRI AGGDLTLEIA TRADDNNSLL YAMSRMRGAL VDTIGRIKGA SETIGTATRE IASGNLDLSS RTEQQASSLE ETASAMEQLM STVQQNADNA QQANQLAASA SDVAVRGGDV VTRVVETMGS INASSRKIVD IIGVIDGIAF QTNILALNAA VEAARAGEQG RGFAVVAGEV RSLAQRSAAA AKEIKALIDD SVVNVDAGSA LVEEAGTTMR EIVASVKRVT DIVGEISSAS QEQRSGIEEV SHAVTQLDDA TQQNAALVEQ AAAAAQSLEE QAVSLTQVVA QFRLDAHALR APAMVARVEP AVAPVKPVAL ATPMAPASPK DEAPRRGAAR PSTEAAKPKL TSRKPPVLRK AAAKPVERTE KSLAAPAAIP ASLAKAKPLV AAGDNADWET F
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