Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5935 |
Symbol | |
ID | 4042799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 138284 |
End bp | 139846 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637981354 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_588063 |
Protein GI | 94314854 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein [COG4564] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGAC TTACCCTCAA TACCAAACTC TGGGCGGCGC TTGCCGTCAT GTGGTTGCTG CTGCTTGCGC TCGGTACATG GAATGCCTTC CACGCGCGGT CCGTGATGAT GGCCGAGCGG CGCGACGCGC TGCAATCGCT TGTGACCACC GGCGAGGGCA TCGTCAAGCT GTACGCTGAA CGCGCCGCCA AGGGCGTGAT GTCGAAAGAG GACGCCCAGG CCGCCGCCAA GGACGCGCTG CGCGCGATGC GCTTCGGCCA GAACGGCTAC CTGTTCATTG TCGATTCCAA GCCGCAGGTG GTGCTGAACC CGGGCCTGCC GCAGACCGAA GGCAATATGG TCGGCGACTT CAAGGACCCC GACGGGGTGT ACGTCTACCG CGCGATTATC GAAGGCGCGC GCCGCACCAC CGGCGAGGAC GCTGGCTTTT CGACCTACCG GGGCCGCCTG CCCGGCACCG AAACGCCGAA GCGCAAGCTG ACCTACGGGC GCTACGTGGC GGACTGGGAC TGGTTCGTCG CCACGGGCGT GTTCCTGGTC GACATCGAGG ATGCCTTCCG CGCCAACCTG ATCAACGCGA TCGCCAGTAC CTTGCTGATC GGAGCGCTGA TTGCGGCCGT GATGGGCATG ATCATGCGGA CGGTCCAGCG CAGTCTTGGT GGCGAGCCGG CCTACGCCGT GGAATCAGTG ACGCGTATCG CGGGCGGCGA CCTGACCGTG CCGCTGCAGG TGCGCGGTGA CGACGATCGC AGCGTGCTGG CCGCCATGCA GCAGATGCAG GAGCGACTTG CCGCAACGCT GGGCGATATC CGCGGCGCGG CCGGCGCCAT CGCCAGCGCC ACGCATCAGA TCTCGGCTGG CAACAACGAT CTCTCGCAAC GGACTGAACA GCAGGCCGCC GCGCTCGAGC AGACCGCATC GAGCATGGAG GAACTGACCG GCATCGTGCG CCAGAACGCC GACAATGCGC GGCAGGCCAG CGCGCTGGCC GTCAACGCGT CGGAGATCGC CAACCGTGGC GGCGAGGTGG TCAGCGAAGT GGTGAGCACG ATGGGCGAGA TCAACCAGGC CTCGCGCAAG ATCGTCGACA TCATCGGCGT GATCGAGGGC ATCGCATTCC AGACCAATAT CCTGGCGCTG AACGCTGCGG TGGAAGCCGC GCGCGCCGGT GAACAAGGAC GCGGGTTCGC GGTGGTGGCG GGTGAGGTGC GTAGTCTCGC CCAACGCAGC GCCAATGCGG CGAAGGAGAT CAAGACGCTG ATCGACAACT CGGTGGCGCA GGTCGACACC GGTTCGACAC TGGTGGCCAA GGCCGGCGCC ACAATGCAGG AGGTGGTTGG CGCGGTCAGA CGCGTCACCG ACATCATGGG CGAGATCAGC GCCGCGTCGG CCGAGCAGAG CACCGGCATC GAGCAGGTGG GCCAGGCCGT GACGCAGATG GACTCCGTCA CGCAGCAGAA TGCCGCGCTT GTGGAAGAAG CGGCCGCTGC CGCGCAATCG CTGGCCGAGC AGGCGCAGTC GATGATGCGT GCGGTGTCGG CGTTCCGGCT GGCAACGGTC TGA
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Protein sequence | MNRLTLNTKL WAALAVMWLL LLALGTWNAF HARSVMMAER RDALQSLVTT GEGIVKLYAE RAAKGVMSKE DAQAAAKDAL RAMRFGQNGY LFIVDSKPQV VLNPGLPQTE GNMVGDFKDP DGVYVYRAII EGARRTTGED AGFSTYRGRL PGTETPKRKL TYGRYVADWD WFVATGVFLV DIEDAFRANL INAIASTLLI GALIAAVMGM IMRTVQRSLG GEPAYAVESV TRIAGGDLTV PLQVRGDDDR SVLAAMQQMQ ERLAATLGDI RGAAGAIASA THQISAGNND LSQRTEQQAA ALEQTASSME ELTGIVRQNA DNARQASALA VNASEIANRG GEVVSEVVST MGEINQASRK IVDIIGVIEG IAFQTNILAL NAAVEAARAG EQGRGFAVVA GEVRSLAQRS ANAAKEIKTL IDNSVAQVDT GSTLVAKAGA TMQEVVGAVR RVTDIMGEIS AASAEQSTGI EQVGQAVTQM DSVTQQNAAL VEEAAAAAQS LAEQAQSMMR AVSAFRLATV
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