More than 300 homologs were found in PanDaTox collection
for query gene Rmet_5641 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007348  Reut_B5230  methyl-accepting chemotaxis sensory transducer  81.82 
 
 
518 aa  793    Ralstonia eutropha JMP134  Bacteria  normal  0.530292  n/a   
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  100 
 
 
519 aa  1042    Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  62.26 
 
 
513 aa  580  1e-164  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  62.06 
 
 
513 aa  579  1e-164  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.06 
 
 
513 aa  579  1e-164  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  55.15 
 
 
585 aa  544  1e-153  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_012856  Rpic12D_1091  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.89 
 
 
618 aa  513  1e-144  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  53.82 
 
 
515 aa  513  1e-144  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_007952  Bxe_B2784  methyl-accepting chemotaxis sensory transducer  52.79 
 
 
542 aa  512  1e-144  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1155  methyl-accepting chemotaxis transducer transmembrane protein  53.89 
 
 
629 aa  510  1e-143  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.852924 
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  53.11 
 
 
621 aa  511  1e-143  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_010681  Bphyt_0557  methyl-accepting chemotaxis sensory transducer  54.55 
 
 
627 aa  509  1e-143  Burkholderia phytofirmans PsJN  Bacteria  normal  0.191348  normal  0.480006 
 
 
-
 
NC_010557  BamMC406_6172  methyl-accepting chemotaxis sensory transducer  54.99 
 
 
542 aa  505  9.999999999999999e-143  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  53.82 
 
 
515 aa  503  1e-141  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_007951  Bxe_A4159  methyl-accepting chemotaxis sensory transducer  53.7 
 
 
611 aa  503  1e-141  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.62 
 
 
515 aa  501  1e-140  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  51.73 
 
 
520 aa  499  1e-140  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  53.83 
 
 
515 aa  495  1e-139  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_010676  Bphyt_6769  methyl-accepting chemotaxis sensory transducer  52.62 
 
 
519 aa  496  1e-139  Burkholderia phytofirmans PsJN  Bacteria  normal  0.176172  normal  0.340215 
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  50.29 
 
 
519 aa  490  1e-137  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5935  methyl-accepting chemotaxis sensory transducer  54.83 
 
 
520 aa  486  1e-136  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A6164  methyl-accepting chemotaxis sensory transducer  53.09 
 
 
544 aa  484  1e-135  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A0157  methyl-accepting chemotaxis protein  53.41 
 
 
546 aa  483  1e-135  Burkholderia mallei SAVP1  Bacteria  normal  0.293853  n/a   
 
 
-
 
NC_010676  Bphyt_4450  methyl-accepting chemotaxis sensory transducer  51.17 
 
 
519 aa  483  1e-135  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000313766  normal 
 
 
-
 
NC_009080  BMA10247_2862  methyl-accepting chemotaxis protein  53.41 
 
 
546 aa  483  1e-135  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3780  methyl-accepting chemotaxis sensory transducer  51.26 
 
 
517 aa  484  1e-135  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0330596 
 
 
-
 
NC_009076  BURPS1106A_0520  methyl-accepting chemotaxis protein  53.41 
 
 
546 aa  483  1e-135  Burkholderia pseudomallei 1106a  Bacteria  normal  0.640738  n/a   
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  53.41 
 
 
546 aa  483  1e-135  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  53.41 
 
 
546 aa  484  1e-135  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  54.4 
 
 
598 aa  481  1e-134  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  52.61 
 
 
521 aa  478  1e-133  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3823  methyl-accepting chemotaxis sensory transducer  50.29 
 
 
513 aa  475  1e-133  Burkholderia phymatum STM815  Bacteria  normal  normal  0.793143 
 
 
-
 
NC_007952  Bxe_B2237  methyl-accepting chemotaxis sensory transducer  50.88 
 
 
513 aa  476  1e-133  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_2891  methyl-accepting chemotaxis sensory transducer  52.61 
 
 
521 aa  477  1e-133  Burkholderia ambifaria AMMD  Bacteria  normal  0.657214  n/a   
 
 
-
 
NC_010515  Bcenmc03_5460  methyl-accepting chemotaxis sensory transducer  51.26 
 
 
517 aa  472  1e-132  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.601436  normal  0.166688 
 
 
-
 
NC_009078  BURPS1106A_A1623  methyl-accepting chemotaxis protein  51.06 
 
 
517 aa  473  1e-132  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6000  methyl-accepting chemotaxis sensory transducer  50.29 
 
 
513 aa  472  1e-132  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.292044 
 
 
-
 
NC_009075  BURPS668_A1710  methyl-accepting chemotaxis protein  51.06 
 
 
517 aa  473  1e-132  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4204  methyl-accepting chemotaxis sensory transducer  51.46 
 
 
517 aa  474  1e-132  Burkholderia ambifaria AMMD  Bacteria  normal  0.305878  normal 
 
 
-
 
NC_010552  BamMC406_4727  methyl-accepting chemotaxis sensory transducer  51.26 
 
 
517 aa  469  1.0000000000000001e-131  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.308358 
 
 
-
 
NC_010508  Bcenmc03_2845  methyl-accepting chemotaxis sensory transducer  53.38 
 
 
545 aa  470  1.0000000000000001e-131  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.788597  normal 
 
 
-
 
NC_007511  Bcep18194_B0881  methyl-accepting chemotaxis sensory transducer  50.87 
 
 
517 aa  469  1.0000000000000001e-131  Burkholderia sp. 383  Bacteria  normal  normal  0.284562 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  52.92 
 
 
566 aa  470  1.0000000000000001e-131  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_008060  Bcen_2221  methyl-accepting chemotaxis sensory transducer  53.7 
 
 
545 aa  471  1.0000000000000001e-131  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3544  methyl-accepting chemotaxis sensory transducer  50.87 
 
 
541 aa  469  1.0000000000000001e-131  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.256262  n/a   
 
 
-
 
NC_008542  Bcen2424_2834  methyl-accepting chemotaxis sensory transducer  53.7 
 
 
545 aa  471  1.0000000000000001e-131  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4823  methyl-accepting chemotaxis sensory transducer  50.87 
 
 
541 aa  469  1.0000000000000001e-131  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.224381 
 
 
-
 
NC_010084  Bmul_0469  methyl-accepting chemotaxis sensory transducer  53.5 
 
 
549 aa  466  9.999999999999999e-131  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_0685  methyl-accepting chemotaxis protein  53.75 
 
 
526 aa  467  9.999999999999999e-131  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0438  methyl-accepting chemotaxis protein  54.81 
 
 
512 aa  463  1e-129  Burkholderia thailandensis E264  Bacteria  normal  0.212381  n/a   
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  50.1 
 
 
541 aa  462  1e-129  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_006348  BMA3184  methyl-accepting chemotaxis protein  54.72 
 
 
511 aa  456  1e-127  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3227  methyl-accepting chemotaxis sensory transducer  49.51 
 
 
518 aa  457  1e-127  Burkholderia phymatum STM815  Bacteria  normal  0.543154  normal 
 
 
-
 
NC_010676  Bphyt_6518  methyl-accepting chemotaxis sensory transducer  47.86 
 
 
514 aa  451  1e-125  Burkholderia phytofirmans PsJN  Bacteria  normal  0.73924  normal 
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  48.05 
 
 
544 aa  451  1e-125  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0212  methyl-accepting chemotaxis protein  52.92 
 
 
464 aa  446  1.0000000000000001e-124  Burkholderia pseudomallei 1710b  Bacteria  normal  0.387539  n/a   
 
 
-
 
NC_012880  Dd703_1028  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.14 
 
 
532 aa  439  9.999999999999999e-123  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  51.58 
 
 
585 aa  437  1e-121  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_010002  Daci_4414  methyl-accepting chemotaxis sensory transducer  49.42 
 
 
518 aa  436  1e-121  Delftia acidovorans SPH-1  Bacteria  normal  0.684904  normal 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  51.5 
 
 
587 aa  434  1e-120  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_007650  BTH_II1198  methyl-accepting chemotaxis protein  51.77 
 
 
482 aa  432  1e-120  Burkholderia thailandensis E264  Bacteria  normal  0.311579  n/a   
 
 
-
 
NC_010676  Bphyt_4117  methyl-accepting chemotaxis sensory transducer  45.61 
 
 
545 aa  432  1e-120  Burkholderia phytofirmans PsJN  Bacteria  normal  0.36552  normal 
 
 
-
 
NC_009078  BURPS1106A_A2638  methyl-accepting chemotaxis protein  45.63 
 
 
521 aa  430  1e-119  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1043  putative methyl-accepting chemotaxis transducer transmembrane protein  45.63 
 
 
521 aa  430  1e-119  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2780  methyl-accepting chemotaxis protein  45.63 
 
 
521 aa  430  1e-119  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_5380  methyl-accepting chemotaxis sensory transducer  46.14 
 
 
524 aa  416  9.999999999999999e-116  Burkholderia phymatum STM815  Bacteria  normal  0.653994  normal  0.987419 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  51.17 
 
 
584 aa  413  1e-114  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  50.53 
 
 
584 aa  411  1e-113  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3031  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.16 
 
 
529 aa  409  1e-113  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.07 
 
 
579 aa  407  1.0000000000000001e-112  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_009079  BMA10247_A0161  putative methyl-accepting chemotaxis protein  45.93 
 
 
485 aa  400  9.999999999999999e-111  Burkholderia mallei NCTC 10247  Bacteria  normal  0.573068  n/a   
 
 
-
 
NC_008782  Ajs_3664  methyl-accepting chemotaxis sensory transducer  45.68 
 
 
598 aa  401  9.999999999999999e-111  Acidovorax sp. JS42  Bacteria  normal  0.197645  normal 
 
 
-
 
NC_008784  BMASAVP1_1305  putative methyl-accepting chemotaxis protein  45.93 
 
 
485 aa  400  9.999999999999999e-111  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0353  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.8 
 
 
564 aa  393  1e-108  Acidovorax ebreus TPSY  Bacteria  normal  0.244374  n/a   
 
 
-
 
NC_007509  Bcep18194_C7598  methyl-accepting chemotaxis sensory transducer  48.27 
 
 
552 aa  389  1e-107  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA0135  putative methyl-accepting chemotaxis protein  46.77 
 
 
456 aa  387  1e-106  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1719  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.33 
 
 
517 aa  377  1e-103  Dickeya dadantii Ech703  Bacteria  unclonable  0.00000712436  n/a   
 
 
-
 
NC_013421  Pecwa_2070  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.44 
 
 
519 aa  367  1e-100  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  66.56 
 
 
594 aa  363  4e-99  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  63.37 
 
 
573 aa  362  7.0000000000000005e-99  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  63.04 
 
 
558 aa  360  3e-98  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4779  methyl-accepting chemotaxis sensory transducer  39.81 
 
 
506 aa  360  3e-98  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1797  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.37 
 
 
519 aa  359  6e-98  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.00249048  n/a   
 
 
-
 
NC_012880  Dd703_2488  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.72 
 
 
512 aa  357  1.9999999999999998e-97  Dickeya dadantii Ech703  Bacteria  normal  0.0783891  n/a   
 
 
-
 
NC_010524  Lcho_2167  methyl-accepting chemotaxis sensory transducer  40.52 
 
 
678 aa  352  1e-95  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.195593 
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  61.81 
 
 
579 aa  351  2e-95  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_012857  Rpic12D_4163  methyl-accepting chemotaxis sensory transducer  67.19 
 
 
634 aa  351  2e-95  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  62.35 
 
 
613 aa  350  2e-95  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_010678  Rpic_4051  methyl-accepting chemotaxis sensory transducer  67.19 
 
 
634 aa  351  2e-95  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_5545  methyl-accepting chemotaxis sensory transducer  45.01 
 
 
512 aa  349  6e-95  Burkholderia phymatum STM815  Bacteria  normal  normal  0.857112 
 
 
-
 
NC_010524  Lcho_4331  methyl-accepting chemotaxis sensory transducer  41.59 
 
 
534 aa  347  2e-94  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.555356 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  57.45 
 
 
579 aa  344  2.9999999999999997e-93  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  61.24 
 
 
597 aa  343  4e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_24360  chemotaxis sensory transducer  41.34 
 
 
544 aa  342  1e-92  Azotobacter vinelandii DJ  Bacteria  normal  0.249262  n/a   
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  61.08 
 
 
559 aa  340  4e-92  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  59.28 
 
 
576 aa  340  4e-92  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  58.63 
 
 
573 aa  337  1.9999999999999998e-91  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_010622  Bphy_1586  methyl-accepting chemotaxis sensory transducer  59.88 
 
 
553 aa  337  3.9999999999999995e-91  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6645  methyl-accepting chemotaxis sensory transducer  59.29 
 
 
583 aa  332  9e-90  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.983597 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  56.62 
 
 
584 aa  330  3e-89  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
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