Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4163 |
Symbol | |
ID | 8021851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 763530 |
End bp | 765434 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644832943 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_002984083 |
Protein GI | 241665724 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTGGA TCAAGCGTTT GCCGGTGTCC ACGGTACTCA CCGGTGGTTT TCTGATCGTG GCGGCCATGG GCGCAGCCAT TGGCGGGTTG GGCATCTATA CGATCACGCA GTTGACAAAG GCCAGCGAAG AGCTGGCGCA AAAGCAGATG CGCGCCATCA CGCAGATGGG CAGCGCGGCC AACAGCCTGG CACACGCCAG CCGTGCGCAG ACCGCATTGC TGATTGCCAC CACGCTCACC GAGCGCAAGA CGCTCAGCAC GCAGATTGCC GACAGCATGC AGCACCTCAA AGACGGGGTG GAGAACGTGC GCCCGCTGTT CACGTCGGAC GAAGGCAAGA AGATGATCCG CGAGGTCGAT GCGATCTACC CCGTCTGGGG CAAGCGCATG ACCGATTTCG TTGCGCTGAT GGACAAGCAG GGCCTGGACC CGACCCAGTT CGACAGCCGC GTCACGGCCG AGAACGTCGG CCTGCTGGAC GACACCGCCG CGTTTGAAAA GACGCTCGAC AAGATGGTCA AGCGTGTGGA AGAGGTCTCT GCCGCGTCCA CCGTCAAGGC CCGTGACGAT GCACACCGCT CGCGCCTGGT GATGATGGTG ATGGCCTGTG CAGGTGCGCT GCTCGGCATC GTGCTGGGCC TGGTCATTGC GCGCCGGCTG TCGCGCCAGT TGGGCGGTGA GCCTTCGTAC GCGGCCGAGA TCGCGCGCCG CATTGCCGCC GGCGATCTGG CCGTGCACGT GCAGACCCGC CCCGGCGACC ATGGCAGCAT GCTCTTCGCC ATGGCGCAGA TGCAGCAGCA ACTGACCGGC ACGATCACCA ACATCAAGAG TTCCGCCGAT TCCATTGCCA GCGCCACCAA GCAGATCGCG GCCGGCAACG CAGACTTGTC GCAGCGCACG GAAGAGCAGG CCTCGTCGCT GGAGGAAACC GCTTCCAGCA TGGAAGAGCT GACCAGCATC GTGAAGCAGA ACGCCGACAA CGCCCGCCAG GCCAGCCAGT TGGCCGGCAG CGCGTCGGAC ATCGCCGTCA AGGGCGGCGA AGTGGTGGGC CGCGTGGTCG AAACCATGGC CGGCATCAAC GCCAGCAGCA AGAAGATCGC CGACATCATC GGCGTGATCG AAGGCATTGC CTTCCAGACC AACATCCTCG CCCTGAATGC AGCGGTGGAA GCCGCGCGCG CGGGCGAACA GGGACGCGGT TTTGCAGTGG TGGCCGGCGA GGTGCGCAGC CTCGCGCAGC GCTCGGCCAC GGCGGCCAAG GAAATCAAGG AGCTGATCGG CGATTCCGTT GGCCGTGTGC GCAACGGGTC GGCCCTGGTG GCCGAAGCCG GCACGGTGAT CGAGGAGGTG GTAGTGGCCG TGCGCCGGGT GACCGACATC ATGGGCGAGA TTTCCGCCGC GTCGGACGAA CAAAGCTCCG GCATCGAACA GGTCAACCAG GCCGTGAACC AGATGGACGA GGTCACGCAG CAGAACGCCG CGCTGGTGGA GCAAGCCGCC GCCGCCGCCC TGTCGCTGGA AGAACAGGCG CAACTGCTGC GCAATGCAGT GGCAACGTTC CGCACCGATG CCTCGGCCGA GTTGGCCGTG GCGGCGCCGA TTGCCGTTGC GGCGCCAGCC GTGCCCGGCG AAGCCCGCCC CCACAAGACC GAAGTGGTGC CCTCTGTTGC GCGCGCCTTG GCGTCGCGCA AAGCCGCCAA GCCGGCCGTG TTACCGGAGG CTGCCCCCGA GCAGGTTGCC GGCCCGGCTG CCGAGCAAGG AGAAAAAGCG CCTCACGATG CACATGCACC GATTGTGCCG GTGGCTGCCG CCGTCGTTTC GGCAGCCGCT TCGGAGGCCG TCGTCGCCCC GGCCCTCAAG CTGACCACCG GTTCTGCCGA TGAAGATGAC TGGAGCACCT TCTGA
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Protein sequence | MGWIKRLPVS TVLTGGFLIV AAMGAAIGGL GIYTITQLTK ASEELAQKQM RAITQMGSAA NSLAHASRAQ TALLIATTLT ERKTLSTQIA DSMQHLKDGV ENVRPLFTSD EGKKMIREVD AIYPVWGKRM TDFVALMDKQ GLDPTQFDSR VTAENVGLLD DTAAFEKTLD KMVKRVEEVS AASTVKARDD AHRSRLVMMV MACAGALLGI VLGLVIARRL SRQLGGEPSY AAEIARRIAA GDLAVHVQTR PGDHGSMLFA MAQMQQQLTG TITNIKSSAD SIASATKQIA AGNADLSQRT EEQASSLEET ASSMEELTSI VKQNADNARQ ASQLAGSASD IAVKGGEVVG RVVETMAGIN ASSKKIADII GVIEGIAFQT NILALNAAVE AARAGEQGRG FAVVAGEVRS LAQRSATAAK EIKELIGDSV GRVRNGSALV AEAGTVIEEV VVAVRRVTDI MGEISAASDE QSSGIEQVNQ AVNQMDEVTQ QNAALVEQAA AAALSLEEQA QLLRNAVATF RTDASAELAV AAPIAVAAPA VPGEARPHKT EVVPSVARAL ASRKAAKPAV LPEAAPEQVA GPAAEQGEKA PHDAHAPIVP VAAAVVSAAA SEAVVAPALK LTTGSADEDD WSTF
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