Gene Rpic12D_4163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4163 
Symbol 
ID8021851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp763530 
End bp765434 
Gene Length1905 bp 
Protein Length634 aa 
Translation table11 
GC content66% 
IMG OID644832943 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002984083 
Protein GI241665724 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTGGA TCAAGCGTTT GCCGGTGTCC ACGGTACTCA CCGGTGGTTT TCTGATCGTG 
GCGGCCATGG GCGCAGCCAT TGGCGGGTTG GGCATCTATA CGATCACGCA GTTGACAAAG
GCCAGCGAAG AGCTGGCGCA AAAGCAGATG CGCGCCATCA CGCAGATGGG CAGCGCGGCC
AACAGCCTGG CACACGCCAG CCGTGCGCAG ACCGCATTGC TGATTGCCAC CACGCTCACC
GAGCGCAAGA CGCTCAGCAC GCAGATTGCC GACAGCATGC AGCACCTCAA AGACGGGGTG
GAGAACGTGC GCCCGCTGTT CACGTCGGAC GAAGGCAAGA AGATGATCCG CGAGGTCGAT
GCGATCTACC CCGTCTGGGG CAAGCGCATG ACCGATTTCG TTGCGCTGAT GGACAAGCAG
GGCCTGGACC CGACCCAGTT CGACAGCCGC GTCACGGCCG AGAACGTCGG CCTGCTGGAC
GACACCGCCG CGTTTGAAAA GACGCTCGAC AAGATGGTCA AGCGTGTGGA AGAGGTCTCT
GCCGCGTCCA CCGTCAAGGC CCGTGACGAT GCACACCGCT CGCGCCTGGT GATGATGGTG
ATGGCCTGTG CAGGTGCGCT GCTCGGCATC GTGCTGGGCC TGGTCATTGC GCGCCGGCTG
TCGCGCCAGT TGGGCGGTGA GCCTTCGTAC GCGGCCGAGA TCGCGCGCCG CATTGCCGCC
GGCGATCTGG CCGTGCACGT GCAGACCCGC CCCGGCGACC ATGGCAGCAT GCTCTTCGCC
ATGGCGCAGA TGCAGCAGCA ACTGACCGGC ACGATCACCA ACATCAAGAG TTCCGCCGAT
TCCATTGCCA GCGCCACCAA GCAGATCGCG GCCGGCAACG CAGACTTGTC GCAGCGCACG
GAAGAGCAGG CCTCGTCGCT GGAGGAAACC GCTTCCAGCA TGGAAGAGCT GACCAGCATC
GTGAAGCAGA ACGCCGACAA CGCCCGCCAG GCCAGCCAGT TGGCCGGCAG CGCGTCGGAC
ATCGCCGTCA AGGGCGGCGA AGTGGTGGGC CGCGTGGTCG AAACCATGGC CGGCATCAAC
GCCAGCAGCA AGAAGATCGC CGACATCATC GGCGTGATCG AAGGCATTGC CTTCCAGACC
AACATCCTCG CCCTGAATGC AGCGGTGGAA GCCGCGCGCG CGGGCGAACA GGGACGCGGT
TTTGCAGTGG TGGCCGGCGA GGTGCGCAGC CTCGCGCAGC GCTCGGCCAC GGCGGCCAAG
GAAATCAAGG AGCTGATCGG CGATTCCGTT GGCCGTGTGC GCAACGGGTC GGCCCTGGTG
GCCGAAGCCG GCACGGTGAT CGAGGAGGTG GTAGTGGCCG TGCGCCGGGT GACCGACATC
ATGGGCGAGA TTTCCGCCGC GTCGGACGAA CAAAGCTCCG GCATCGAACA GGTCAACCAG
GCCGTGAACC AGATGGACGA GGTCACGCAG CAGAACGCCG CGCTGGTGGA GCAAGCCGCC
GCCGCCGCCC TGTCGCTGGA AGAACAGGCG CAACTGCTGC GCAATGCAGT GGCAACGTTC
CGCACCGATG CCTCGGCCGA GTTGGCCGTG GCGGCGCCGA TTGCCGTTGC GGCGCCAGCC
GTGCCCGGCG AAGCCCGCCC CCACAAGACC GAAGTGGTGC CCTCTGTTGC GCGCGCCTTG
GCGTCGCGCA AAGCCGCCAA GCCGGCCGTG TTACCGGAGG CTGCCCCCGA GCAGGTTGCC
GGCCCGGCTG CCGAGCAAGG AGAAAAAGCG CCTCACGATG CACATGCACC GATTGTGCCG
GTGGCTGCCG CCGTCGTTTC GGCAGCCGCT TCGGAGGCCG TCGTCGCCCC GGCCCTCAAG
CTGACCACCG GTTCTGCCGA TGAAGATGAC TGGAGCACCT TCTGA
 
Protein sequence
MGWIKRLPVS TVLTGGFLIV AAMGAAIGGL GIYTITQLTK ASEELAQKQM RAITQMGSAA 
NSLAHASRAQ TALLIATTLT ERKTLSTQIA DSMQHLKDGV ENVRPLFTSD EGKKMIREVD
AIYPVWGKRM TDFVALMDKQ GLDPTQFDSR VTAENVGLLD DTAAFEKTLD KMVKRVEEVS
AASTVKARDD AHRSRLVMMV MACAGALLGI VLGLVIARRL SRQLGGEPSY AAEIARRIAA
GDLAVHVQTR PGDHGSMLFA MAQMQQQLTG TITNIKSSAD SIASATKQIA AGNADLSQRT
EEQASSLEET ASSMEELTSI VKQNADNARQ ASQLAGSASD IAVKGGEVVG RVVETMAGIN
ASSKKIADII GVIEGIAFQT NILALNAAVE AARAGEQGRG FAVVAGEVRS LAQRSATAAK
EIKELIGDSV GRVRNGSALV AEAGTVIEEV VVAVRRVTDI MGEISAASDE QSSGIEQVNQ
AVNQMDEVTQ QNAALVEQAA AAALSLEEQA QLLRNAVATF RTDASAELAV AAPIAVAAPA
VPGEARPHKT EVVPSVARAL ASRKAAKPAV LPEAAPEQVA GPAAEQGEKA PHDAHAPIVP
VAAAVVSAAA SEAVVAPALK LTTGSADEDD WSTF