| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3485 |
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| Symbol | |
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| ID | 6160091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3895716 |
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| End bp | 3897437 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641666257 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001792504 |
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| Protein GI | 171060155 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000328178 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACTTG GAACCAAACT TCTCGGTGCG TTTCTGGCTG TCTGCCTGCT GGGGGCCATC
GTCAGCGGCG TCGGCATCCG CAACGCGGGC CTCATCAACG AGGCGGCCGA CACGATGTAC
GAGCGCGAGC TGATCGGGCT TTCGGAGGTC AAGGAGGCCA ACATCGGCCT GCTGTATGTC
GGCCGTGCGC TGCGCAACGC GCTGCTGGCG ACCACCGACG CACAGCGTGC CGAGGCGCTC
AGCCGCGTCA AGGCCCGGAT CGTCGAGGTC GAGGCCCATC TCGACAAGGC CCGTCCGCTG
TTCGTGCGCG AGGACGGCAA GCGCAAGTTC GTCGAAACCG ACCGGCTCTG GCAGACCTAC
AAGCAGACGG CCGAGAAGAT GTACGGCGTG GCCCAGGCGT CAGCCCTGAG CGACAGCGTC
GACGTGGCGG TCTACCTGTT CGGCGATTAC GCGAAAGCCA GCAACGCGGT CGACGATGCG
ATGACGGCGC TGGCCGAGTT CAAGGCCGAA AACGCCCGCA GCACCGCCCT GGAAGTGACC
GAGATCTACG AAAGCGGCCG CGCCATGATG CTGCTGCTGG TGGCGCTGTC GGTCGCCGTG
GGGCTGGCCT GCGGCTACTG GCTGAGCCGC TCGGTCACGC GCCAGCTGGG CACCGAACCC
GAGGTTGCCG CCGACCTGGC CCGGCGGGTG GCCGAGGGCG ACCTGTCCAC GCCCATCAGC
CTGCGCGCGG GTGACACCGT CAGCGTGATG GCGGCGCTCA GCACCATGCA GGCGGCCCTG
TCGGCGGTGG TGGCCAACGT GCGCGGCAAT GCCGAAAGCG TCGCCACCGC CAGCTCGCAG
ATCGCGCAGG GCAACGTCGA CCTCAGCCAG CGCACCGAAG AGCAGGCCAG CGCGCTGCAG
CAGACCGCCG CCACGATGGA CCAGCTGACC AGCACCGTGC GCAACAACGC CGACAGCGCC
AAGCAGGCCA ACCAGCTGGC GCTGGGCGCG TGCAACGTCG CCACCCGGGG CGGCGAGGTG
GTGGCCCAGG TGGTCGACAC CATGAAGGGC ATCAACGACA GCTCCAAGCG CATCGCCGAC
ATCATCGCGG TGATCGACGG CATCGCCTTC CAGACCAACA TCCTGGCGCT GAACGCGGCC
GTCGAGGCGG CGCGTGCCGG CGAGCAGGGC CGCGGCTTCG CCGTGGTGGC CGCCGAGGTG
CGCAGCCTGG CGCAGCGCAG CGCCGACGCG GCCAAGGAGA TCAAGACGCT CATCACGCGC
AGCGTCGAGC AGGTCGAGAA CGGCAGCGCC CTGGTCGATC AGGCCGGTGG CTCGATGACC
GAGATCGTCG GCGCGATCCA GCGTGTCACC GACATCGTGG CCGAGATCAG CGCCGCCAGC
GTCGAGCAGA GTGCCGGCGT CAGCCAGGTC GGCCAGGCCG TCTCGCAGAT GGACCAGGTG
ACGCAGCAGA ACGCCGCTCT GGTCGAAGAA AGCGCCGCCG CGGCCGAGAG CCTGCGCCAG
CAGGCCGAAC AGCTGGTCGG GATCGTCAGC GTGTTCAAGC TGGGTCACGA GGTGGCAGGC
GCCCGCGCGG CGGGGCACTC GCGCAGCAGC GCCAGGCCGC AGGCCCCGGC AGCGCCGCGT
GCGCCGCTGT CGCCGCGCGC GCCGGCCGCC CAGGCCAGCG CGCCGGCCCG CGCCACGCCG
CAGCCGGCAC AAGCCGCCGA GCAGGACTGG ACGTCGTTCT GA
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| Protein sequence | MKLGTKLLGA FLAVCLLGAI VSGVGIRNAG LINEAADTMY ERELIGLSEV KEANIGLLYV
GRALRNALLA TTDAQRAEAL SRVKARIVEV EAHLDKARPL FVREDGKRKF VETDRLWQTY
KQTAEKMYGV AQASALSDSV DVAVYLFGDY AKASNAVDDA MTALAEFKAE NARSTALEVT
EIYESGRAMM LLLVALSVAV GLACGYWLSR SVTRQLGTEP EVAADLARRV AEGDLSTPIS
LRAGDTVSVM AALSTMQAAL SAVVANVRGN AESVATASSQ IAQGNVDLSQ RTEEQASALQ
QTAATMDQLT STVRNNADSA KQANQLALGA CNVATRGGEV VAQVVDTMKG INDSSKRIAD
IIAVIDGIAF QTNILALNAA VEAARAGEQG RGFAVVAAEV RSLAQRSADA AKEIKTLITR
SVEQVENGSA LVDQAGGSMT EIVGAIQRVT DIVAEISAAS VEQSAGVSQV GQAVSQMDQV
TQQNAALVEE SAAAAESLRQ QAEQLVGIVS VFKLGHEVAG ARAAGHSRSS ARPQAPAAPR
APLSPRAPAA QASAPARATP QPAQAAEQDW TSF
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