| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3216 |
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| Symbol | |
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| ID | 6161458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3563425 |
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| End bp | 3565164 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665990 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001792239 |
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| Protein GI | 171059890 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACA ACTTGAAAGT CTCCACCCGG CTGACGATCC TCATCGGCGT CCTGTGCACG
CTGCTGATCG GCATCGGCGG CCTCGGGATC TACGGCATCG GCGAGTCCAA CGATGCCCTT
CGGCGGGTCT ATGAAGACCG CACCGAGCCA GCCGCCAACC TGGCCGAGAT CAAGGGGCTG
CTGTTGCGCA ACCGGCTGGC GATCGCGGTC GCCCAGGCGC ATCCCACGCC CGAGGTCATT
GCCGAACGCA CCGGTCAGAT CGAGCGCAAC ATCGCCGACA TCACGCAGAT CTGGGAGGTG
TTCATGTCGA ACAACCTCAC GCCCGAGGAG GACCGGCTGG CGACCGTGTT CAACGCCGAC
CGCAAGCGTT TCGTGCAGGA AGGCCTGGTG CCGGCCGTGA CGGCCTTGCG TGCCAACGAC
CTGCCCGGGG TCGAGCGCCT GGTGCTCGAG AAGATCCGGC CGCTGTTCGA GCCCGTCGAG
TCCGGCATCG AGGCCCTCGT CCAGCTCGAA CTCGCCGAGG CGAAGAAGGC CTATGCCGAG
GCCGATGCGC GCTATGCCGT GATCCGCTCG ATCTCGATCG CCGCCGTCGC GGGCGGCCTG
CTGTTCGCGG CGCTGTTCGG CGTGCTGATG ATCCGCTCGT TCGCCCGCCA GCTCGGTGCC
GAACCGCAGG AGGCCGCGGA CGTGGCGCAG CGTGTGGCGG CCGGCGATCT CGGCGCCCGC
ATCGCGCTCA AGTCCGGCGA CAGCAGCAGC CTGATGGCGC AGCTCAAGGC GATGCAGGAC
AGCCTGGCCG CGGTGGTCGG CAACGTGCGC CAGAACGCCG AGAGCGTGGC CACCGCCAGC
GCGCAGATCG CGCAAGGCAA CAACGACCTG TCGGCCCGCA CCGAAGAGCA GGCCAGCGCG
CTGGAAGAAA CCTCGGCCAC GATGGAGCAG CTCAACGCCA CCGTGCGCCA GAACGCCGAC
AACGCCCGCC AGGCCAGCCA GCTCGCGCTG GGCGCCAGCA CCGTGGCCGT GCGCGGCGGC
GAGGTGGTCG CCCAGGTGGT CGACACCATG AAGGGGATCA ACGACAGCTC GCGCAAGATC
GCCGACATCA TCGGCGTGAT CGACGGCATC GCCTTCCAGA CCAACATCCT GGCGCTCAAC
GCCGCGGTCG AGGCCGCGCG CGCCGGCGAG CAGGGCCGCG GTTTTGCCGT GGTGGCCGGC
GAGGTGCGCA ACCTCGCGCA GCGCGCCGCC GGTGCCGCCA AGGAGATCAA GAGCCTGATC
ACCGCCAGCG GCGAGCGGGT CGAACAAGGC ACCGCGCTGG TCAGCCGGGC GGGCGAGACG
ATGCAGGAGA TCGTCGATTC GATCGGCCGC GTCAACGACA TCATGGGCGA GATCAGCGCC
GCCAGCACCG AGCAGAGCTC GGGCGTGGCG CAGGTCGGCG AGGCCATCAC GCAGATGGAC
CAGGCCACCC AGCAGAACGC CGCGCTGGTC GAACAGAGTG CCGCCGCGGC CGAGAGCCTC
AAGCAGCAGG CCGATCAGCT GGTGCAGGCG GTGTCGGTGT TCCGGCTCGG CCACGACCTG
CAAGGCGGCA GCGCCGCTGC GACGCCGAGC CATCCGCCGG TGGAACGCCG CAGCCCGCAG
CCTGCCGAGA ATGTCGTGCG GCCGGACTTC GGATCCGGCA CCCGCCCGCC GGTGGCCAGC
GTCGCACCGC CGGCCCCGAC GGCCGCGCGC ACCGGCACCG ACGATTGGGA ATCGTTCTGA
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| Protein sequence | MINNLKVSTR LTILIGVLCT LLIGIGGLGI YGIGESNDAL RRVYEDRTEP AANLAEIKGL
LLRNRLAIAV AQAHPTPEVI AERTGQIERN IADITQIWEV FMSNNLTPEE DRLATVFNAD
RKRFVQEGLV PAVTALRAND LPGVERLVLE KIRPLFEPVE SGIEALVQLE LAEAKKAYAE
ADARYAVIRS ISIAAVAGGL LFAALFGVLM IRSFARQLGA EPQEAADVAQ RVAAGDLGAR
IALKSGDSSS LMAQLKAMQD SLAAVVGNVR QNAESVATAS AQIAQGNNDL SARTEEQASA
LEETSATMEQ LNATVRQNAD NARQASQLAL GASTVAVRGG EVVAQVVDTM KGINDSSRKI
ADIIGVIDGI AFQTNILALN AAVEAARAGE QGRGFAVVAG EVRNLAQRAA GAAKEIKSLI
TASGERVEQG TALVSRAGET MQEIVDSIGR VNDIMGEISA ASTEQSSGVA QVGEAITQMD
QATQQNAALV EQSAAAAESL KQQADQLVQA VSVFRLGHDL QGGSAAATPS HPPVERRSPQ
PAENVVRPDF GSGTRPPVAS VAPPAPTAAR TGTDDWESF
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