| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1091 |
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| Symbol | |
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| ID | 8018729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1146293 |
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| End bp | 1148149 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644829868 |
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| Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
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| Protein accession | YP_002981055 |
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| Protein GI | 241662695 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC TCAGCTTTCG CCAAAAGCTT TGGCTGCCGT TGGTCATCAG CCTTGTCGCG
CTGACGTTGA TCTCGGTATT CAACGCGTAT CAGGCGCGCG AGATCCGCAT GGAGGAGCGC
AAGAACAACC TCGTCAGCGT GACGACCATG GCGATGAACC TGGTCAAGCA GTACGACGAC
CTGACCAAGA ACGGCACGTT GAGCAAAGAC GCCGCGCAAA AGCAGGCGCT CGACCGTTTC
AAGGCGCTGC GCTACGACAA GGACGGCTAC TTCACCATCA CCAGTTCCAA CAACGTGGTG
GTGATGCACC CGATCAAGCC CGAGTTCATC GGCAAGGACC AATCCGGCTT CAAGGATGCG
CAGGGCAATG CCGTCTACGT TGGCTTGTCG AATGCGGCCA AAGATCCGAA GGGCGGATTC
ACCAGCTATG TGTGGCCGAA AGTCGGCGGC ACGGATCCGG TGCCCAAGAC GGCTTTCGCG
ATGCGCTATG AGCCGTGGGA CTGGGTCTTC TCGACCGGCG TCTACATGGA CGACATCAAC
GCTGCATTCA TGACGTCGCT TTACCAGACC GGCGGCCTGC TTCTGCTGGT GGGCGGCTTG
CTGGTGCTCC TGGGCAGCGT TGCGAACCGC AGCCTGCAGC GCACGCTGGG CGGCGACCCC
GCCTACGCGG CTGACGTTGC CAACCGCATT GCCGGCGGCG ACCTGACGGT GGAGATTGCC
ACCCGTGCTG ACGACAACGA CAGCCTGCTC TACGCGATGA GCCGCATGCG CGGGGCGCTG
GTGGACACCA TCGGCCGCAT CAAGGGCGCG TCGGAAACCA TCGGCACCGC CACGCGCGAA
ATCGCCAGCG GCAACCTCGA CCTCTCGTCG CGCACCGAAC AGCAGGCCAG CTCGCTCGAA
GAAACGGCTT CGGCCATGGA GCAGCTGATG TCGACCGTGC AGCAGAACGC CGACAACGCC
CAGCAGGCCA ACCAGTTGGC CGCGTCCGCC TCGGATGTGG CCGTGCGCGG CGGCGACGTG
GTGACGCGCG TGGTGGAAAC CATGGGCTCG ATCAACGCGT CGTCCCGCAA GATCGTCGAC
ATCATCGGCG TGATCGACGG TATTGCGTTC CAGACCAACA TCCTTGCGCT GAATGCGGCA
GTGGAAGCCG CACGTGCTGG GGAACAGGGC CGTGGTTTTG CCGTGGTGGC CGGTGAGGTG
CGCAGCCTTG CGCAGCGCAG CGCCGCTGCT GCCAAGGAGA TCAAGGCGCT GATCGACGAT
TCCGTTGTCA ATGTGGATGC AGGCAGCGCG CTGGTGGAAG AAGCCGGCAC GACCATGCGC
GAGATCGTGG CGAGCGTGAA GCGCGTGACC GACATCGTTG GCGAGATTTC ATCGGCCAGC
CAGGAGCAGC GCTCGGGCAT TGAAGAAGTG AGCCACGCCG TCACGCAGCT TGACGACGCC
ACGCAGCAGA ACGCTGCGCT GGTGGAGGAA GCGGCTGCCG CAGCGCAATC CCTGGAAGAG
CAGGCGGTGA GCCTGACCCA GGTGGTGGCG CAATTCCGCT TGGATGCGCA CGCGCTGCGT
GCCCCCGCCA TGGTGGCCAG GGTGGAACCG GTGGTTGCGC CGGTCAAGCC CGTCGCAGCT
GCCGCTCCGG CGGCGCCCAA AGAAGAAGCG CCGCGCCGCG GTGCCGCCAA GCCGAGCACC
GAAGCCGCCA AGCCCAAGCT GACGTCGCGC AAGCCGCCTG TGTTGCGAAA GGCTGCTGCC
AAACCGGTCG AGCGAACCGA AAAGAGCCCG GCTGCACCGG CAGCGATACC CGCGAGCCTG
ACCAAGGCGA AGCCTCTTGT CGCCGCCGGA GACGACGCCG ACTGGGAAAC GTTCTGA
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| Protein sequence | MSKLSFRQKL WLPLVISLVA LTLISVFNAY QAREIRMEER KNNLVSVTTM AMNLVKQYDD
LTKNGTLSKD AAQKQALDRF KALRYDKDGY FTITSSNNVV VMHPIKPEFI GKDQSGFKDA
QGNAVYVGLS NAAKDPKGGF TSYVWPKVGG TDPVPKTAFA MRYEPWDWVF STGVYMDDIN
AAFMTSLYQT GGLLLLVGGL LVLLGSVANR SLQRTLGGDP AYAADVANRI AGGDLTVEIA
TRADDNDSLL YAMSRMRGAL VDTIGRIKGA SETIGTATRE IASGNLDLSS RTEQQASSLE
ETASAMEQLM STVQQNADNA QQANQLAASA SDVAVRGGDV VTRVVETMGS INASSRKIVD
IIGVIDGIAF QTNILALNAA VEAARAGEQG RGFAVVAGEV RSLAQRSAAA AKEIKALIDD
SVVNVDAGSA LVEEAGTTMR EIVASVKRVT DIVGEISSAS QEQRSGIEEV SHAVTQLDDA
TQQNAALVEE AAAAAQSLEE QAVSLTQVVA QFRLDAHALR APAMVARVEP VVAPVKPVAA
AAPAAPKEEA PRRGAAKPST EAAKPKLTSR KPPVLRKAAA KPVERTEKSP AAPAAIPASL
TKAKPLVAAG DDADWETF
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