More than 300 homologs were found in PanDaTox collection
for query gene Bamb_4204 on replicon NC_008391
Organism: Burkholderia ambifaria AMMD



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010552  BamMC406_4727  methyl-accepting chemotaxis sensory transducer  98.65 
 
 
517 aa  1026    Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.308358 
 
 
-
 
NC_009078  BURPS1106A_A1623  methyl-accepting chemotaxis protein  82.17 
 
 
517 aa  847    Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1710  methyl-accepting chemotaxis protein  82.36 
 
 
517 aa  848    Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3227  methyl-accepting chemotaxis sensory transducer  66.67 
 
 
518 aa  676    Burkholderia phymatum STM815  Bacteria  normal  0.543154  normal 
 
 
-
 
NC_007435  BURPS1710b_A0212  methyl-accepting chemotaxis protein  83.37 
 
 
464 aa  770    Burkholderia pseudomallei 1710b  Bacteria  normal  0.387539  n/a   
 
 
-
 
NC_007511  Bcep18194_B0881  methyl-accepting chemotaxis sensory transducer  94.58 
 
 
517 aa  971    Burkholderia sp. 383  Bacteria  normal  normal  0.284562 
 
 
-
 
NC_007650  BTH_II1198  methyl-accepting chemotaxis protein  81.33 
 
 
482 aa  761    Burkholderia thailandensis E264  Bacteria  normal  0.311579  n/a   
 
 
-
 
NC_010086  Bmul_3780  methyl-accepting chemotaxis sensory transducer  93.23 
 
 
517 aa  959    Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0330596 
 
 
-
 
NC_007952  Bxe_B2237  methyl-accepting chemotaxis sensory transducer  72.18 
 
 
513 aa  728    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6000  methyl-accepting chemotaxis sensory transducer  71.6 
 
 
513 aa  730    Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.292044 
 
 
-
 
NC_008061  Bcen_3544  methyl-accepting chemotaxis sensory transducer  95.16 
 
 
541 aa  978    Burkholderia cenocepacia AU 1054  Bacteria  normal  0.256262  n/a   
 
 
-
 
NC_008391  Bamb_4204  methyl-accepting chemotaxis sensory transducer  100 
 
 
517 aa  1042    Burkholderia ambifaria AMMD  Bacteria  normal  0.305878  normal 
 
 
-
 
NC_008543  Bcen2424_4823  methyl-accepting chemotaxis sensory transducer  95.16 
 
 
541 aa  978    Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.224381 
 
 
-
 
NC_010623  Bphy_3823  methyl-accepting chemotaxis sensory transducer  71.6 
 
 
513 aa  726    Burkholderia phymatum STM815  Bacteria  normal  normal  0.793143 
 
 
-
 
NC_010515  Bcenmc03_5460  methyl-accepting chemotaxis sensory transducer  95.36 
 
 
517 aa  981    Burkholderia cenocepacia MC0-3  Bacteria  normal  0.601436  normal  0.166688 
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  53.69 
 
 
521 aa  492  9.999999999999999e-139  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  51.46 
 
 
519 aa  492  9.999999999999999e-139  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_2891  methyl-accepting chemotaxis sensory transducer  53.69 
 
 
521 aa  494  9.999999999999999e-139  Burkholderia ambifaria AMMD  Bacteria  normal  0.657214  n/a   
 
 
-
 
NC_007510  Bcep18194_A6164  methyl-accepting chemotaxis sensory transducer  53.88 
 
 
544 aa  491  1e-137  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_0520  methyl-accepting chemotaxis protein  53.68 
 
 
546 aa  488  1e-136  Burkholderia pseudomallei 1106a  Bacteria  normal  0.640738  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0157  methyl-accepting chemotaxis protein  53.68 
 
 
546 aa  488  1e-136  Burkholderia mallei SAVP1  Bacteria  normal  0.293853  n/a   
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  53.68 
 
 
546 aa  488  1e-136  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  53.68 
 
 
546 aa  487  1e-136  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0557  methyl-accepting chemotaxis sensory transducer  53.49 
 
 
627 aa  486  1e-136  Burkholderia phytofirmans PsJN  Bacteria  normal  0.191348  normal  0.480006 
 
 
-
 
NC_009080  BMA10247_2862  methyl-accepting chemotaxis protein  53.68 
 
 
546 aa  488  1e-136  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2845  methyl-accepting chemotaxis sensory transducer  54.07 
 
 
545 aa  482  1e-135  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.788597  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  49.51 
 
 
585 aa  481  1e-134  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_007951  Bxe_A4159  methyl-accepting chemotaxis sensory transducer  53.02 
 
 
611 aa  479  1e-134  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0469  methyl-accepting chemotaxis sensory transducer  54.07 
 
 
549 aa  480  1e-134  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2221  methyl-accepting chemotaxis sensory transducer  54.26 
 
 
545 aa  481  1e-134  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2834  methyl-accepting chemotaxis sensory transducer  54.26 
 
 
545 aa  481  1e-134  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0685  methyl-accepting chemotaxis protein  54.38 
 
 
526 aa  472  1e-132  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  49.52 
 
 
519 aa  474  1e-132  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0438  methyl-accepting chemotaxis protein  54.6 
 
 
512 aa  463  1e-129  Burkholderia thailandensis E264  Bacteria  normal  0.212381  n/a   
 
 
-
 
NC_010676  Bphyt_4450  methyl-accepting chemotaxis sensory transducer  49.32 
 
 
519 aa  464  1e-129  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000313766  normal 
 
 
-
 
NC_010676  Bphyt_6518  methyl-accepting chemotaxis sensory transducer  49.9 
 
 
514 aa  462  1e-129  Burkholderia phytofirmans PsJN  Bacteria  normal  0.73924  normal 
 
 
-
 
NC_006348  BMA3184  methyl-accepting chemotaxis protein  54.6 
 
 
511 aa  460  9.999999999999999e-129  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  51.53 
 
 
513 aa  458  9.999999999999999e-129  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  51.53 
 
 
513 aa  458  9.999999999999999e-129  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  52.37 
 
 
598 aa  461  9.999999999999999e-129  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_007348  Reut_B5230  methyl-accepting chemotaxis sensory transducer  50.29 
 
 
518 aa  457  1e-127  Ralstonia eutropha JMP134  Bacteria  normal  0.530292  n/a   
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  50.78 
 
 
515 aa  454  1.0000000000000001e-126  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  52.04 
 
 
513 aa  453  1.0000000000000001e-126  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  50 
 
 
515 aa  449  1e-125  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  50 
 
 
515 aa  450  1e-125  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  48.55 
 
 
520 aa  446  1.0000000000000001e-124  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2784  methyl-accepting chemotaxis sensory transducer  48.93 
 
 
542 aa  443  1e-123  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6769  methyl-accepting chemotaxis sensory transducer  50.1 
 
 
519 aa  444  1e-123  Burkholderia phytofirmans PsJN  Bacteria  normal  0.176172  normal  0.340215 
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  48.44 
 
 
541 aa  441  9.999999999999999e-123  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  48.74 
 
 
621 aa  435  1e-121  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  49.59 
 
 
566 aa  432  1e-120  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_012856  Rpic12D_1091  methyl-accepting chemotaxis sensory transducer with Cache sensor  48.74 
 
 
618 aa  434  1e-120  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  51.87 
 
 
585 aa  430  1e-119  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  49.9 
 
 
587 aa  427  1e-118  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_007974  Rmet_5935  methyl-accepting chemotaxis sensory transducer  48.05 
 
 
520 aa  426  1e-118  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1155  methyl-accepting chemotaxis transducer transmembrane protein  47.96 
 
 
629 aa  417  9.999999999999999e-116  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.852924 
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  47.58 
 
 
515 aa  412  1e-113  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  45.4 
 
 
544 aa  405  1.0000000000000001e-112  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_010002  Daci_4414  methyl-accepting chemotaxis sensory transducer  47.3 
 
 
518 aa  404  1e-111  Delftia acidovorans SPH-1  Bacteria  normal  0.684904  normal 
 
 
-
 
NC_010676  Bphyt_4117  methyl-accepting chemotaxis sensory transducer  44.4 
 
 
545 aa  405  1e-111  Burkholderia phytofirmans PsJN  Bacteria  normal  0.36552  normal 
 
 
-
 
NC_010557  BamMC406_6172  methyl-accepting chemotaxis sensory transducer  49.69 
 
 
542 aa  398  1e-109  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A2780  methyl-accepting chemotaxis protein  44.08 
 
 
521 aa  395  1e-108  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1043  putative methyl-accepting chemotaxis transducer transmembrane protein  44.08 
 
 
521 aa  395  1e-108  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2638  methyl-accepting chemotaxis protein  44.08 
 
 
521 aa  395  1e-108  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  53.71 
 
 
584 aa  390  1e-107  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_5380  methyl-accepting chemotaxis sensory transducer  44.53 
 
 
524 aa  388  1e-106  Burkholderia phymatum STM815  Bacteria  normal  0.653994  normal  0.987419 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  49.11 
 
 
584 aa  387  1e-106  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_008784  BMASAVP1_1305  putative methyl-accepting chemotaxis protein  44.86 
 
 
485 aa  375  1e-102  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0353  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.44 
 
 
564 aa  373  1e-102  Acidovorax ebreus TPSY  Bacteria  normal  0.244374  n/a   
 
 
-
 
NC_009079  BMA10247_A0161  putative methyl-accepting chemotaxis protein  44.86 
 
 
485 aa  375  1e-102  Burkholderia mallei NCTC 10247  Bacteria  normal  0.573068  n/a   
 
 
-
 
NC_010524  Lcho_2167  methyl-accepting chemotaxis sensory transducer  46.9 
 
 
678 aa  364  2e-99  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.195593 
 
 
-
 
NC_006349  BMAA0135  putative methyl-accepting chemotaxis protein  46.1 
 
 
456 aa  363  3e-99  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1028  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.28 
 
 
532 aa  358  9.999999999999999e-98  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1719  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.98 
 
 
517 aa  354  2e-96  Dickeya dadantii Ech703  Bacteria  unclonable  0.00000712436  n/a   
 
 
-
 
NC_010625  Bphy_5545  methyl-accepting chemotaxis sensory transducer  46.79 
 
 
512 aa  354  2e-96  Burkholderia phymatum STM815  Bacteria  normal  normal  0.857112 
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.19 
 
 
579 aa  352  1e-95  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_013421  Pecwa_2070  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.71 
 
 
519 aa  348  2e-94  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3664  methyl-accepting chemotaxis sensory transducer  44.15 
 
 
598 aa  348  2e-94  Acidovorax sp. JS42  Bacteria  normal  0.197645  normal 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  58.11 
 
 
579 aa  341  1e-92  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012917  PC1_1797  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.12 
 
 
519 aa  341  2e-92  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.00249048  n/a   
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  58.39 
 
 
558 aa  337  1.9999999999999998e-91  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  59.88 
 
 
573 aa  337  2.9999999999999997e-91  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  57.45 
 
 
573 aa  333  5e-90  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_012912  Dd1591_3031  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.29 
 
 
529 aa  332  1e-89  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  59.4 
 
 
579 aa  330  5.0000000000000004e-89  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  42.36 
 
 
597 aa  329  6e-89  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_4331  methyl-accepting chemotaxis sensory transducer  42.19 
 
 
534 aa  329  8e-89  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.555356 
 
 
-
 
NC_012880  Dd703_2488  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.34 
 
 
512 aa  329  9e-89  Dickeya dadantii Ech703  Bacteria  normal  0.0783891  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  59.03 
 
 
586 aa  323  3e-87  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  59.57 
 
 
576 aa  322  9.999999999999999e-87  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  52.01 
 
 
562 aa  322  9.999999999999999e-87  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  57.72 
 
 
584 aa  320  3e-86  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_012912  Dd1591_4046  methyl-accepting chemotaxis sensory transducer  56.21 
 
 
560 aa  320  3e-86  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_6446  methyl-accepting chemotaxis sensory transducer  45.58 
 
 
512 aa  320  3.9999999999999996e-86  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6681  methyl-accepting chemotaxis sensory transducer  45.58 
 
 
512 aa  320  3.9999999999999996e-86  Burkholderia cenocepacia HI2424  Bacteria  normal  0.292072  normal 
 
 
-
 
NC_010512  Bcenmc03_6278  methyl-accepting chemotaxis sensory transducer  46.08 
 
 
512 aa  320  5e-86  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.236466  normal  0.246568 
 
 
-
 
NC_010086  Bmul_4779  methyl-accepting chemotaxis sensory transducer  38.26 
 
 
506 aa  320  5e-86  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  60.67 
 
 
613 aa  319  7.999999999999999e-86  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  58.36 
 
 
532 aa  318  2e-85  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_010622  Bphy_1586  methyl-accepting chemotaxis sensory transducer  56.21 
 
 
553 aa  317  3e-85  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
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