Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4446 |
Symbol | |
ID | 4666281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4940283 |
End bp | 4942100 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639825637 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_972760 |
Protein GI | 120613082 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0260008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.622584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGTTTC TGAAGAACAT CCGGCTGGGC ACCATGCTCG GCATCGGTTT CGCCATCGTC ATCGGCCTCA GCTTCATGGT CGCCGCCTAT GGCCGCTTCC AGCTCGACTC TACCGGCAAG ACCCTGCATG CCCTGTCGAA GGAGCGGATG GACATCCTGC TGCAGCTCCA GCAGGTCAAG GACAACACCA ACGTCGTCGC CCGCGCGGTA CGCAACCTGG CCCTGCTGGA AGACGAGGCC GCCATGGCCG AAGAGAAGAA GCGGCTCGAT GGCGTGGTCT CCGACACCTC GCAGATCATG GCCGCGCTGC AGCAGCGGGT GGTTTCCGCC GAAGGCCGCG CGCTCATGGG CCGCATCGCC GAGGCGCGCC CGCAATTCCT GGGCACCGTG GACAAGGCGG CGAAGCTCGG CCTGGCCAAC GACCTGGCGA ATGCGCGCAC GGTGGTGCTC GGCGAGATGC GCACCGCGCA GAACGTCTAC TTCAAGGCCG TGGAGGACAT GATCTCCTAC CAGCGCAAGG TGACCACGGA CATGGCGGAA TCGTCCAGCA GCGGTGCTAC CGCCGCCGGC AACACCATGA TCGTGCTGGC AGTGCTGTCG GCTGCGATCG GCGCGCTCGT CGCCTGGTCG ATCACGCGCC GCGTGAAGAG CCAGCTCGGC GGCGAACCCG CCTACGCCGC TCGGATCGCC CAGGAGGTCG CCCGCGGCAA CCTCGCCGTC CACGTCGACC TGCGCCCCGG CGACTCCTCC TCCGTCCTCG CCGCCATGGG CGCCATGCGC GCCAACCTCG CTAAAGTAGT CTCCGAAGTC CGCCACAGCA GCGAATCCAT CGCCACCGGC GCTTCCCAGA TCGCCACCGG CAACGCCGAC CTCAGCCAGC GCACCGAGGA GCAGGCCTCC AACCTCCAGC AGACCGCCGC CTCCATGGAG GAGATGGCCT CCACCGTCAA GCAGAACGCC GACACCGTGC GCACCGCCTC CCAGCTCGCC TCCTCGGCCT CCGCCACCGC CGCGCGCGGC GGCGACGTCG TGGGCAACGT CGTGCGCACC ATGGAGGACA TCACCGCCTC CTCCCGCAAG ATCGGCGACA TCATCGGCGT CATCGACTCC ATCGCCTTCC AGACCAACAT CCTCGCGCTC AACGCCGCCG TCGAGGCCGC ACGCGCCGGC GAGCAGGGCC GGGGCTTCGC CGTCGTCGCC GGCGAGGTGC GCACCCTCGC GCAGCGCTCC GCACAGGCCG CCAAGGAGAT CAAGGCCCTC ATCGGCGAGA GCGTCTCCAA GGTCGAGACC GGCTCGCAGC TCGTGGGCGA GGCCGGCACC ACCATGGGAG AGATCGTCGA GCAGGCCCGC CGCGTCGCCG ACCTCATCGC CGAGATCGGA GCGGCCACCC ACGAGCAGGA GCAGGGCATC TCCCAGGTGA GCGACGCCGT CAACCAGCTC GACCAGGTCA CCCAGCAGAA CGCCGCGCTC GTGGAGGAAT CCGCCGCCGC CGCCGACAGC CTCAACTCCC AGGCCGCGCG CCTCGTGCAG CTCGTCAGCG TCTTCCAGGT CGATGCCGCC GCCTCCCAGG CCGTCATCGC ACAGGCGCAG TCGCGCAGCC GCGATACCGC CCGCGCCGCC TCCGCCGCGC TGCAGCATGC CAAGGCACCG GCTGCCGCGC AGCGCACGGC TCCCGGCATC GCCGCCGCAC CGGCAAAGCC CGCCCGGGCA TCTGCGCCGG CCGCCACCCG CCCGGCACTC GCTCCTGCCC AGCAGCCGGC CGCTCCCGCC CCCGCCAGGG CCGCCGGGTC CGGCAACGAC GACTGGGAAA CCTTCTGA
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Protein sequence | MQFLKNIRLG TMLGIGFAIV IGLSFMVAAY GRFQLDSTGK TLHALSKERM DILLQLQQVK DNTNVVARAV RNLALLEDEA AMAEEKKRLD GVVSDTSQIM AALQQRVVSA EGRALMGRIA EARPQFLGTV DKAAKLGLAN DLANARTVVL GEMRTAQNVY FKAVEDMISY QRKVTTDMAE SSSSGATAAG NTMIVLAVLS AAIGALVAWS ITRRVKSQLG GEPAYAARIA QEVARGNLAV HVDLRPGDSS SVLAAMGAMR ANLAKVVSEV RHSSESIATG ASQIATGNAD LSQRTEEQAS NLQQTAASME EMASTVKQNA DTVRTASQLA SSASATAARG GDVVGNVVRT MEDITASSRK IGDIIGVIDS IAFQTNILAL NAAVEAARAG EQGRGFAVVA GEVRTLAQRS AQAAKEIKAL IGESVSKVET GSQLVGEAGT TMGEIVEQAR RVADLIAEIG AATHEQEQGI SQVSDAVNQL DQVTQQNAAL VEESAAAADS LNSQAARLVQ LVSVFQVDAA ASQAVIAQAQ SRSRDTARAA SAALQHAKAP AAAQRTAPGI AAAPAKPARA SAPAATRPAL APAQQPAAPA PARAAGSGND DWETF
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