| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3266 |
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| Symbol | |
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| ID | 5748851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3573685 |
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| End bp | 3575637 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641298370 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001564289 |
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| Protein GI | 160898707 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.50478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0000385615 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCGGTCC CGCTGATCGC CACCGATCGC CACCGCATCC CCTCGATTCG CAGCCACCGC
CGCTCACCCG CTTTCGCTTC TCGCCGTACG GCACTCCCCA CCATGATGTT TTTCCGCAAT
CTGAAGCTGG CCCACAAGCT GCTGGCCTCT TTCATCGCCC TGCTGCTGCT GACCGCCGGC
CTGGGCCTGT TCTCCGTGGT CCAGCTGGAC CGTGTCAACC GCACGGCCAC CGACCTGGCG
CACCACTGGA TGCCCGCCGA GCGCGTGATC ATGGAGATGC GCTACCAGCT GCAGCGCTAC
CGCTCGCAGA CCATGCAGCA TGTGCTGGCC ACCTCGATGG ATGAAATGGC CATCTACGAC
AAGAGCATGC CGGCGTTGTG GTCCGAGCTG CTCAAGAACC ATCAGGCCTT CGAGCGCTAT
GCCAACACCG CGCGTGAGCG CGAGCTGATG GCCGGCATCA AGGACGACCT GGGCCAGTAC
GCGCAGCACA CGGCAAAGAT CGTGGACCTG TCCCACGCCC TGCGCACCGA GGAAGCCTCC
GAGGTGCTGC GCGGCGATTC GGTCAAGACC AGCCGTGCCA TCAACACCAA GCTGGACGAA
CTGCTCAAGA TCAACGCCCA GGGCATCGAG GATGCCAACC AGGCAGGCGA CGACATCTTC
ACCGCCGCGC GCTGGTGGGT GATCGCCCTG CTGGCGGGGG CCGTCCTCTT CGGCCTGGGC
ATGGCGCTGC TGATCGCCCG CAGCGTGGCA CGCCCCCTGC AGCAGGCCGT GAGCCTGGCA
CAGGCCGTGG CCGCCGGCGA CCTGGGCAGC CGCATCGAGG TGCATGGCAA GGACGAGACC
GGCCAGCTGC TGCAGGCCCT GCAGCACATG AACGAGAGCC TGCAACGCAT CGTCGGCCAG
GTGCGCCAGG GCACGGACTC CATTGCCACG GCCAGCGGCC AGATCGCCTC GGGCAACCAG
GACCTGTCGG CCCGCACCGA GGAACAGGCC AGCTCGCTGG AGCAGACCGC CGCCTCCATG
GAGGAGCTGA CCTCCACCGT CAAGCAAAAC GGTGCCAACG CCCAGCAGGC CAACCAGCTG
GCCGCCGCCG CCTCCCAGGT CGCTGTGCGC GGCGGCTCGG CCGTGGCCCA GGTGGTGCAG
ACCATGTCCG CCATCAACGA TGCCTCGCGC AAGATCGTGG ACATCATCGG CGTCATCGAC
TCCATCGCCT TCCAGACCAA CATCCTGGCG CTGAATGCCG CCGTGGAAGC GGCCCGCGCC
GGTGACCAGG GCCGGGGCTT TGCCGTCGTC GCCTCGGAAG TGCGCACCCT GGCCCAGCGA
TCGGCCGCCG CCGCCAAGGA GATCAAGCAG CTCATCGACG ACTCGGTGGG CAAGGTCGAG
GAAGGCAGCG CCCAGGTCGA CTCGGCCGGC AAGACCATGG AGGAGATCGT GGCCAGCGTG
CGCCGCGTGA CCGACATCAT GGGCGAGATC TCGGCCGCCA GCCATGAGCA GACGGCCGGT
ATCGAGCAGG TCAACCAGGC CGTCACGCAG ATGGACCAGA TGACCCAGCA GAACGCCGCT
CTGGTGGAGG AATCGGCGGC GGCCACCGGC GCACTGCAGG CCCAGGCCAA GGCGCTGGCC
GAGGTGGTCA GCGTGTTCAA GCTCTCGCCG TCCGCCGGCA TGCTGGGCAG CAGCCGCGGT
GTCAACCACG CCGCTGCCGT GGCAGCGCCC CGCCACGCGC CGACGGCGCC CCGCCCGCAT
CTGGCGCCTT CCGCTCCCAA ACGCGCGGTG CCCGCACGTG CTTCGGCCGC CCTGCCTTCT
GTAACCGGTG CGGCCGGTGC AACCCCTGCT CCGGCTGGCG CCGCGCGCCC GGCCCAGCCA
GCACAGCCGG CCCGGCCCGC CGTGACGGCA TCGGCCAAAG CCAAGGCCAA GGCGGCCAGC
ACGGCTTCCG ACGACGATTG GGAAACCTTC TGA
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| Protein sequence | MSVPLIATDR HRIPSIRSHR RSPAFASRRT ALPTMMFFRN LKLAHKLLAS FIALLLLTAG
LGLFSVVQLD RVNRTATDLA HHWMPAERVI MEMRYQLQRY RSQTMQHVLA TSMDEMAIYD
KSMPALWSEL LKNHQAFERY ANTARERELM AGIKDDLGQY AQHTAKIVDL SHALRTEEAS
EVLRGDSVKT SRAINTKLDE LLKINAQGIE DANQAGDDIF TAARWWVIAL LAGAVLFGLG
MALLIARSVA RPLQQAVSLA QAVAAGDLGS RIEVHGKDET GQLLQALQHM NESLQRIVGQ
VRQGTDSIAT ASGQIASGNQ DLSARTEEQA SSLEQTAASM EELTSTVKQN GANAQQANQL
AAAASQVAVR GGSAVAQVVQ TMSAINDASR KIVDIIGVID SIAFQTNILA LNAAVEAARA
GDQGRGFAVV ASEVRTLAQR SAAAAKEIKQ LIDDSVGKVE EGSAQVDSAG KTMEEIVASV
RRVTDIMGEI SAASHEQTAG IEQVNQAVTQ MDQMTQQNAA LVEESAAATG ALQAQAKALA
EVVSVFKLSP SAGMLGSSRG VNHAAAVAAP RHAPTAPRPH LAPSAPKRAV PARASAALPS
VTGAAGATPA PAGAARPAQP AQPARPAVTA SAKAKAKAAS TASDDDWETF
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