More than 300 homologs were found in PanDaTox collection
for query gene Rfer_1480 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  100 
 
 
537 aa  1062    Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  66.93 
 
 
511 aa  640    Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  58.48 
 
 
592 aa  523  1e-147  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  53.68 
 
 
596 aa  469  1.0000000000000001e-131  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  52.04 
 
 
578 aa  467  9.999999999999999e-131  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  52.69 
 
 
552 aa  458  9.999999999999999e-129  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  51.83 
 
 
583 aa  459  9.999999999999999e-129  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  52.8 
 
 
580 aa  459  9.999999999999999e-129  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  53.87 
 
 
542 aa  457  1e-127  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  53.54 
 
 
589 aa  452  1.0000000000000001e-126  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  50.48 
 
 
586 aa  432  1e-120  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  50.91 
 
 
579 aa  431  1e-119  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  49.71 
 
 
559 aa  422  1e-116  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  49.91 
 
 
584 aa  419  1e-116  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  52.45 
 
 
589 aa  418  9.999999999999999e-116  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  48.28 
 
 
557 aa  413  1e-114  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  49.43 
 
 
586 aa  410  1e-113  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  70.25 
 
 
578 aa  412  1e-113  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  47.47 
 
 
553 aa  410  1e-113  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  71.94 
 
 
598 aa  410  1e-113  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  49.24 
 
 
532 aa  402  1e-111  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  68.99 
 
 
527 aa  402  1e-111  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  69.28 
 
 
471 aa  399  9.999999999999999e-111  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  46.21 
 
 
554 aa  399  9.999999999999999e-111  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  46.36 
 
 
569 aa  401  9.999999999999999e-111  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  49 
 
 
535 aa  401  9.999999999999999e-111  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  54.39 
 
 
653 aa  398  1e-109  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  54.51 
 
 
653 aa  399  1e-109  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4877  methyl-accepting chemotaxis sensory transducer  49.9 
 
 
614 aa  390  1e-107  Delftia acidovorans SPH-1  Bacteria  normal  0.296639  normal 
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  62.54 
 
 
537 aa  391  1e-107  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  49.12 
 
 
532 aa  385  1e-106  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  47.16 
 
 
559 aa  386  1e-106  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  48.41 
 
 
573 aa  387  1e-106  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  68.71 
 
 
659 aa  388  1e-106  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  46.25 
 
 
572 aa  381  1e-104  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  48.2 
 
 
513 aa  381  1e-104  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  50.96 
 
 
536 aa  381  1e-104  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  47.24 
 
 
513 aa  377  1e-103  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  47.53 
 
 
589 aa  377  1e-103  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  58.99 
 
 
579 aa  378  1e-103  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  44.4 
 
 
543 aa  373  1e-102  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  45.33 
 
 
548 aa  373  1e-102  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  42.78 
 
 
559 aa  371  1e-101  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  48.17 
 
 
650 aa  371  1e-101  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  45.25 
 
 
584 aa  366  1e-100  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4495  methyl-accepting chemotaxis sensory transducer  44.04 
 
 
605 aa  366  1e-100  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0928828 
 
 
-
 
NC_008752  Aave_0772  methyl-accepting chemotaxis sensory transducer  47.67 
 
 
612 aa  364  2e-99  Acidovorax citrulli AAC00-1  Bacteria  normal  0.343543  normal  0.663369 
 
 
-
 
NC_012917  PC1_3464  methyl-accepting chemotaxis sensory transducer  44.4 
 
 
551 aa  363  3e-99  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0104  methyl-accepting chemotaxis sensory transducer  42.15 
 
 
548 aa  363  4e-99  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1771  methyl-accepting chemotaxis sensory transducer  45.37 
 
 
520 aa  362  1e-98  Ralstonia pickettii 12D  Bacteria  normal  normal  0.841752 
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  45.75 
 
 
525 aa  362  1e-98  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_010682  Rpic_2095  methyl-accepting chemotaxis sensory transducer  45.17 
 
 
520 aa  361  2e-98  Ralstonia pickettii 12J  Bacteria  normal  0.649492  normal  0.265934 
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  43.73 
 
 
587 aa  361  2e-98  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4446  methyl-accepting chemotaxis sensory transducer  43.3 
 
 
605 aa  361  2e-98  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0260008  normal  0.622584 
 
 
-
 
NC_008752  Aave_1343  methyl-accepting chemotaxis sensory transducer  46.78 
 
 
620 aa  360  4e-98  Acidovorax citrulli AAC00-1  Bacteria  normal  0.244601  normal  0.213177 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  44 
 
 
589 aa  359  5e-98  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  44.62 
 
 
520 aa  359  6e-98  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_011992  Dtpsy_1752  methyl-accepting chemotaxis sensory transducer  44.95 
 
 
523 aa  359  7e-98  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  43.33 
 
 
585 aa  358  9.999999999999999e-98  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0110  methyl-accepting chemotaxis sensory transducer  43.63 
 
 
548 aa  357  2.9999999999999997e-97  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.975087  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  59.82 
 
 
598 aa  357  2.9999999999999997e-97  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_4071  methyl-accepting chemotaxis sensory transducer  42.88 
 
 
553 aa  357  2.9999999999999997e-97  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  67.8 
 
 
515 aa  356  5.999999999999999e-97  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_013421  Pecwa_0105  methyl-accepting chemotaxis sensory transducer  42.15 
 
 
556 aa  356  6.999999999999999e-97  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0111  methyl-accepting chemotaxis sensory transducer  41.38 
 
 
556 aa  355  2e-96  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2526  methyl-accepting chemotaxis sensory transducer  41.44 
 
 
554 aa  354  2e-96  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_4354  methyl-accepting chemotaxis sensory transducer  42.64 
 
 
555 aa  352  7e-96  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0695  methyl-accepting chemotaxis sensory transducer  41.59 
 
 
561 aa  352  1e-95  Dickeya zeae Ech1591  Bacteria  normal  0.305861  n/a   
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  46.39 
 
 
581 aa  352  1e-95  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  45.93 
 
 
622 aa  352  1e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  51.81 
 
 
562 aa  351  2e-95  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  52.62 
 
 
567 aa  351  2e-95  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  46.39 
 
 
579 aa  350  3e-95  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  52.96 
 
 
550 aa  350  4e-95  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2831  methyl-accepting chemotaxis sensory transducer  41.05 
 
 
554 aa  350  5e-95  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  43.43 
 
 
554 aa  349  6e-95  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  53.33 
 
 
595 aa  349  8e-95  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  64.08 
 
 
642 aa  349  9e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_008782  Ajs_3659  methyl-accepting chemotaxis sensory transducer  52.7 
 
 
550 aa  348  1e-94  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  54.57 
 
 
566 aa  347  2e-94  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_013421  Pecwa_3618  methyl-accepting chemotaxis sensory transducer  43.43 
 
 
551 aa  347  3e-94  Pectobacterium wasabiae WPP163  Bacteria  normal  0.453306  n/a   
 
 
-
 
NC_010676  Bphyt_6336  methyl-accepting chemotaxis sensory transducer  45.66 
 
 
581 aa  347  3e-94  Burkholderia phytofirmans PsJN  Bacteria  normal  0.794546  normal 
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  52.73 
 
 
577 aa  347  5e-94  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  44.23 
 
 
618 aa  346  7e-94  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  42.05 
 
 
549 aa  345  1e-93  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_012880  Dd703_2474  methyl-accepting chemotaxis sensory transducer  43.73 
 
 
552 aa  345  1e-93  Dickeya dadantii Ech703  Bacteria  normal  0.356267  n/a   
 
 
-
 
NC_012912  Dd1591_1602  methyl-accepting chemotaxis sensory transducer  41.04 
 
 
554 aa  345  1e-93  Dickeya zeae Ech1591  Bacteria  normal  0.33331  n/a   
 
 
-
 
NC_012880  Dd703_1569  methyl-accepting chemotaxis sensory transducer  41.31 
 
 
554 aa  344  2.9999999999999997e-93  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1523  methyl-accepting chemotaxis sensory transducer  42.83 
 
 
539 aa  344  2.9999999999999997e-93  Burkholderia sp. 383  Bacteria  normal  normal  0.377846 
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  44.85 
 
 
539 aa  344  2.9999999999999997e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  49.01 
 
 
508 aa  343  2.9999999999999997e-93  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_007974  Rmet_5306  methyl-accepting chemotaxis sensory transducer  41.1 
 
 
565 aa  342  8e-93  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00488588  normal  0.0415564 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  45.12 
 
 
580 aa  342  1e-92  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  46.83 
 
 
516 aa  342  1e-92  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_008752  Aave_1344  methyl-accepting chemotaxis sensory transducer  48.89 
 
 
536 aa  342  1e-92  Acidovorax citrulli AAC00-1  Bacteria  normal  0.129873  normal  0.199885 
 
 
-
 
NC_010552  BamMC406_4332  methyl-accepting chemotaxis sensory transducer  43.21 
 
 
545 aa  341  2e-92  Burkholderia ambifaria MC40-6  Bacteria  normal  0.167851  normal 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  48.19 
 
 
591 aa  341  2e-92  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.23 
 
 
584 aa  341  2e-92  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  48.91 
 
 
591 aa  340  2.9999999999999998e-92  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_010002  Daci_5082  methyl-accepting chemotaxis sensory transducer  50.11 
 
 
589 aa  340  5e-92  Delftia acidovorans SPH-1  Bacteria  normal  0.678642  normal  0.0204532 
 
 
-
 
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