Gene Daci_4877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4877 
Symbol 
ID5750483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5389463 
End bp5391307 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content69% 
IMG OID641299996 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001565891 
Protein GI160900309 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.296639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTGA AAAACCTCAA GATCTCAACG CGCATGCTGG GCACCTTCGG CCTGCTGGTG 
CTGCTGCTGC TGGCCGTGGT GGCCGCAGCC CTGGTGCAAC TGCGTTCCAT GCGCGCCAGC
ATGGAAGTCA TCACGGGCAA CGCCATGCCC AGCGTGGAGG TGATCAACCA GATCGGCACC
GATGTCGTGC GCACGCGCCT CCTGGAAGTG CGCCATGTCA ACAATGACGA TGCCGCCTAC
AAGACCGATT CGGAAAAGCA GCTGGAACAA CTGCAGCGCC GCCTGGCCGA GCGCAGGAAG
GCCTATGAGC CGCTGCTGTC ATCGGACGAA GAGCGCAGGC TCTACGCGCA ACTGGTCCAG
GAACGCGAGC GCTACCAGCA ACTGAGCCAG CAGGTGCTGG CGCTGTCGCG CCAGGGCGAG
AAGGAAAAGG CCCAGGCGGT GCTGGGCGGC GAGTCGCTGA AGCTCTACAA CGATTCGTCG
AACACGCTGG ATCTGCTGGT CAAGCTCAAC AGTGATGCCG CCTTGCAGGA AAGCCGTAAT
GCCGAGGCCG TGTACGGGCG CTCGGTCGTC GTCCTCAGCG TGGCGGCGCT GGCTGCCGTG
CTGCTGGCCG TGCTGGCCGG CCTGTGGCTG ACGCGCTCCA TCCGCGCGCC GCTGGCGCAT
GCGGTCGATG CCGCAGACCG CGTGGCCAAC GGCGACCTGG GCGGCACCAT CCGCATCGAC
CGCCATGACG AAACCGGCCT GCTGCTGGGC GCGCTGCAGC GCATGCAGTC CAGCCTGGTG
CAGACCGTGC GCAGCGTGCG CCAGAACGCC GAAGGCGTGG CCTCGGCCAG CGCGCAGATT
GCCTCCGGCA ATGCCGACCT GTCCAGCCGC ACGGAAGAGC AGGCCAGTGC CCTGGAGCAG
ACGGCAGCCT CCATGGAGGA GCTGGGCTCC ACCGTGCGCC AGAATGCCGA CAACGCACGC
CAGGCCAATC AGCTGGCGCT CAATGCATCC AGCGTTGCGC GCCGTGGCGG CGAAGTGGTG
GCCGAGGCCG TGGAGACCAT GAAGGGCATC AACGACAGCA GCCGGCGCAT CGGCGACATC
ATCGGCGTGA TCGACTCCAT TGCTTTCCAG ACCAACATCC TCGCGCTCAA TGCCGCGGTG
GAGGCAGCCC GCGCAGGTGA GCAGGGCCGG GGCTTTGCCG TGGTCGCGGG CGAGGTGCGC
TCGCTGGCCC AGCGCAGCGC CGAGGCGGCC AAGGAAATCA AGGCGCTGAT CACGGCCAGC
GTGGAGCGTG TGGAGCAGGG CTCGCAACTG GTGGACCGCG CAGGCACGAC CATGACCGAA
GTGGTGGCCG CCATCGGCCG GGTCACCGAC ATCATGGGCG AGATCAGCTC GGCCAGCACC
GAGCAGAGCT CCGGCGTGGC CCAGGTTGGC GAAGCCGTCA CGCAGATGGA CCAGACCACG
CAGCAGAACG CGGCCCTGGT CGAGGAAAGC GCGGCCGCCG CTGCCTCGCT GCGCAAGCAG
GCGCAGGACC TGGTCGAGGC CGTGGCCGTC TTCCAGTTGC CCCGTGGCGC CACGGACAGC
CATGCGCATG TGCCGCACAG GGTGGCGGCA CCGGCCAGCG CAGCAGCACG CCCCGCAGCC
CCGCCTGTCC GGCCTGCCCC ACCCGCCAGC CCTGCGCGGC CTGCGGCCCT GGGCGGCGGC
GGTGCACCTG CAGGCGGCGA GACGCTGGCC CGCCGGCTTG AGCGCGATGC CACGCCCCCC
ATCCGGCCGC GCGCCGGACC CACGCAGGCC AGCAAGCCGG CGCCACGGCA GCCCGGCCAG
CCTGGTCAGC CCGGTCAGGG CGATGACGAC TGGGAAACCT TCTGA
 
Protein sequence
MNVKNLKIST RMLGTFGLLV LLLLAVVAAA LVQLRSMRAS MEVITGNAMP SVEVINQIGT 
DVVRTRLLEV RHVNNDDAAY KTDSEKQLEQ LQRRLAERRK AYEPLLSSDE ERRLYAQLVQ
ERERYQQLSQ QVLALSRQGE KEKAQAVLGG ESLKLYNDSS NTLDLLVKLN SDAALQESRN
AEAVYGRSVV VLSVAALAAV LLAVLAGLWL TRSIRAPLAH AVDAADRVAN GDLGGTIRID
RHDETGLLLG ALQRMQSSLV QTVRSVRQNA EGVASASAQI ASGNADLSSR TEEQASALEQ
TAASMEELGS TVRQNADNAR QANQLALNAS SVARRGGEVV AEAVETMKGI NDSSRRIGDI
IGVIDSIAFQ TNILALNAAV EAARAGEQGR GFAVVAGEVR SLAQRSAEAA KEIKALITAS
VERVEQGSQL VDRAGTTMTE VVAAIGRVTD IMGEISSAST EQSSGVAQVG EAVTQMDQTT
QQNAALVEES AAAAASLRKQ AQDLVEAVAV FQLPRGATDS HAHVPHRVAA PASAAARPAA
PPVRPAPPAS PARPAALGGG GAPAGGETLA RRLERDATPP IRPRAGPTQA SKPAPRQPGQ
PGQPGQGDDD WETF