Gene Ajs_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1951 
Symbol 
ID4673332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2045403 
End bp2046929 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content65% 
IMG OID639839032 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_986207 
Protein GI121594311 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.747742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTCATCC TGTTTGCGGT GCTCATGCTC ACAGTGGGGG TGTGGCAGTT GCAGGGGGTG 
GCCGGGAGCA CGCGGCAAAT CCTTTCTGTG CCGCTCCAGA AGGAACGGCT GGTGACCGAC
TGGTACGGAG TGATTCGCGC CAGCATCCAG CGTGCCACTG CTGTCGCGCG CAGCAGCGAC
GACTCGCTGA CGGAGTTGTT CGCTGCAGAG AACGCCGCGT CGAGCAAGGA AATCAACGAA
CGGCAGGCCC AGTTCGTCAA GCTCATTTCC GGCAGCGAAG AGCAAGCCCT CTTTGACACT
CTCAGCGGAC ACCGTCAGGC ATACATCCAG GCCCGTGACG CCATCATCGC CGCCAAGAAG
GGCGGGCAGG CAGAGCAGGT GACCACCTTG TTCGAGCGCC AGTTCGTTCC TGCCTCCCGT
GGCTATCTGG AAAGCCTGGC GGCGCTGCGC GACTTCCAGC GGGCCAGTAT CGATCGCACC
GGGCAAGACA TCGACAGCAG CGCTACCGCA AGCTCCTGGC TGATGGGCGG CATCGGGCTG
GTGGTCCTGG TGGCGGGCAT CGGTGTGGCC TGGATTCTTA CCCACAGCAT CACCGCGCCG
TTGGCCCGCG CTGTCCAAGC AACGCAGGCG GTCGCCGCAG GAGACCTCAC GCATGCCGTG
CACTCCAGCG GCCGGGACGA AGGTGCCCAG CTGTTGCAAG CGCTGCAAGC CATGACCGAC
CGTTTGCGTA CCATCGTGGG CGAAGTGCGC CAGGGCGCCG ACAGCATTGC GGGTGCGTCG
GCAGAGATTG CCGCAGGCAA CCTGGACCTC TCCCGGCGCA CGGAACAGCA AGCCAGTTCG
CTGGAGGAAA CGGCAGCTTC CCTGGAAGAG CTGACGTCGA CGGTGCGTCA GAACGCCGAC
AACGCCCATC AAGCCAACCA GCTGGCACGC ACGGCGGCGG ACCAGGCACA GCAGGGCGGC
CAGGTGATGG ACGATGTGAT GCAGACCATG CGCGCCATCG ACGCGTCGTC GCGCAAGATC
GTGGACATCA TTGGCGTGAT CGACTCCATT GCTTTCCAGA CCAACATCCT TGCGCTCAAC
GCGGCGGTCG AAGCGGCACG GGCCGGCGAG CAGGGGCGGG GGTTTGCCGT GGTGGCCTCC
GAGGTGCGCT CACTGGCCGG CCGTTCGTCC GAAGCGGCGA AGGAGATCAA GGACTTGATC
GGACGTTCGG TCGATACCGT CGAGGCGGGC AATCAGCTCG TGGCGAAGGC CGGCACATCC
ATCCAGGACA TCATTCGCAG CGTTGACCAG GTGAGCGCCC TGGTGGGCGA AATCAGTGCG
GCAAGCCGTG AACAGAGCTC GGGCATCGAG CAGGTGAATA TCGCGGTGGC GCACATGGAC
CAGGCGACGC AGCAGAATGC CGCGCTCGTC GAAGAGGCCA CCGCTGCGAC GCAATCGCTG
CAGGGCCAGG CGGCGCAAGT GGCCCGGGCC GTAGGGGTCT TTCGCGTTGA TTCCTCGGCA
GTCGCGTTGC CGGCACCGCA GGCCTGA
 
Protein sequence
MLILFAVLML TVGVWQLQGV AGSTRQILSV PLQKERLVTD WYGVIRASIQ RATAVARSSD 
DSLTELFAAE NAASSKEINE RQAQFVKLIS GSEEQALFDT LSGHRQAYIQ ARDAIIAAKK
GGQAEQVTTL FERQFVPASR GYLESLAALR DFQRASIDRT GQDIDSSATA SSWLMGGIGL
VVLVAGIGVA WILTHSITAP LARAVQATQA VAAGDLTHAV HSSGRDEGAQ LLQALQAMTD
RLRTIVGEVR QGADSIAGAS AEIAAGNLDL SRRTEQQASS LEETAASLEE LTSTVRQNAD
NAHQANQLAR TAADQAQQGG QVMDDVMQTM RAIDASSRKI VDIIGVIDSI AFQTNILALN
AAVEAARAGE QGRGFAVVAS EVRSLAGRSS EAAKEIKDLI GRSVDTVEAG NQLVAKAGTS
IQDIIRSVDQ VSALVGEISA ASREQSSGIE QVNIAVAHMD QATQQNAALV EEATAATQSL
QGQAAQVARA VGVFRVDSSA VALPAPQA