| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5082 |
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| Symbol | |
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| ID | 5750693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5632811 |
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| End bp | 5634580 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641300206 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001566096 |
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| Protein GI | 160900514 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.678642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0204532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGAC TTCGCATGGC ACACAAGCTG TGGCTTGCAG TGGCCGCCAT CGTGGTGGCG
CTGGTGGGCG TGGTCGGCTT GTCGGGCTAT CGCTCGGCCC AGGTCCAGGC CCGGTCCGAG
GCGGTGAACC AGGAGATGCA GGCGCGGGTC CAGGCCGCCG TGCGCTGGAT GGGGCTGACC
GAAACCAACG CGGCCCGCAC CCAGGCCGTG GTGGTCAGCA GCGATGCCGC GGTCGAGGCC
GAGTTCAAGG ACGTGATCTC CGCCACCTCG GCGCGGATCA CCGAGGTGCA GAAATCACTG
GAAGCCATGC CCCTGTCCGA CGCAGACAAG GCGCAGATGG CCAGGATTGC GGCAGCCCGC
AAGACCATGA CCGAACTGCG TGCCCAGGCG CGCCAGCTCA AGGCCGACGG CCGGCAGGAG
CAGGCATTGG TCCTGGTCAA GCAGTCCTAC AACCCTGCCG TGGATGCCTA CCTGCAGTCG
CTGCGCGACT TCGTGCAGAT GCAGGAGCAG GTGGCGCGTA CCAGCCAGCA AGAGATGGCC
GCCTCGCGCA GGCTCACCGT GGGCTTTGCC GCTGTAGCCG TGGGCCTGCT GCTGCTGGGC
ATCGTCATCG GCGCCCATTT TCTGATTGCC AGCATCCGCC GGCCCCTGGC CGAGGCCAGC
GAACTGGCCG AACGCATTGC CGCAGGCGAC CTGAGCGCAG GCGCGCAGGG ACAGGCACAG
CGTGCTGATG AATTCGGCGA CCTGCTGCGC TCGCTGCAGG CCATGAGCGA ATCGCTGTCG
GGCATGGTGC AGCAGGTGCG CCAGAGCACG GACAGCATCG CCATCGCCAG CGCCGAGATC
GCCACCGGCA ACCAGGACCT GTCCGTGCGC ACCGAGCAGA CCTCCAGCAA CCTGCAGGAG
ACGGCTGCCG CCATGGAGCA GTTCACCAGC ACGCTGCAGC AAAGCGCCAG CAGTGCCCAG
CAGGCCAGCA GCCTGGCGGC GGGCGCATCA CAGGTGGCCC AGCGCGGCGG CGAGGTCGTG
GCCCGGGTGG TCGAGACCAT GAAGGGCATC AACGACAGCA GCCGGCAGAT TGCCGACATC
GTCGGCGTCA TCGACTCCAT TGCCTTCCAG ACCAACATCC TGGCGCTGAA CGCCGCCGTG
GAGGCGGCCC GCGCCGGCGA GCAGGGCCGG GGCTTTGCCG TGGTGGCCAG CGAGGTGCGC
ACGCTGGCAC AGCGCAGCGC GGCGGCTGCC AAGGAAATCC GCCAGCTCAT CGGCGCCTCG
GTGGAGCGGG TGGAGGACGG CGCCCGCCTG GTGGGCGATG CGGGCACCGC CATGGACGGC
ATTGTGCAGT CCGTGCAGCG CGTGGCCGAC ACCATCGGCG AGATCACGGC GGCCTCTTCG
GAGCAAAGCG CGGGCGTGGC CCAGGTCAAC CAGGCCGTGG GGCAACTGGA CCAGATGACG
CAGCAGAACG CGGCCCTGGT CGAGCAAAGC GCGGCCGCGG CGCAAAGCCT GCGAGAGCAG
GCCGAGCAGC TGTCGCGGAC GGTGGCGGTG TTCAAGGTGG CGCACCTGGC GCCTTCGCCG
ACGACGCTCG CAAGGCAGGC TGCGCCGGCG GCGCGCACTG CGCACAGCGC GGCCGCAGCG
CCAAGGCGGC CGGCAGCAGC CGTGGCGCCT GCGGCTGCCG GGCCGGTTGC CGCGCGGCCT
GCCGCAGCAA GGGCGGCGGC GCCCAAGCTG GCCTCGGCGC CCCGGCCTGC CGCACCGGCA
GCCGAGGATG GCCAATGGGA GAGTTTCTAG
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| Protein sequence | MLRLRMAHKL WLAVAAIVVA LVGVVGLSGY RSAQVQARSE AVNQEMQARV QAAVRWMGLT
ETNAARTQAV VVSSDAAVEA EFKDVISATS ARITEVQKSL EAMPLSDADK AQMARIAAAR
KTMTELRAQA RQLKADGRQE QALVLVKQSY NPAVDAYLQS LRDFVQMQEQ VARTSQQEMA
ASRRLTVGFA AVAVGLLLLG IVIGAHFLIA SIRRPLAEAS ELAERIAAGD LSAGAQGQAQ
RADEFGDLLR SLQAMSESLS GMVQQVRQST DSIAIASAEI ATGNQDLSVR TEQTSSNLQE
TAAAMEQFTS TLQQSASSAQ QASSLAAGAS QVAQRGGEVV ARVVETMKGI NDSSRQIADI
VGVIDSIAFQ TNILALNAAV EAARAGEQGR GFAVVASEVR TLAQRSAAAA KEIRQLIGAS
VERVEDGARL VGDAGTAMDG IVQSVQRVAD TIGEITAASS EQSAGVAQVN QAVGQLDQMT
QQNAALVEQS AAAAQSLREQ AEQLSRTVAV FKVAHLAPSP TTLARQAAPA ARTAHSAAAA
PRRPAAAVAP AAAGPVAARP AAARAAAPKL ASAPRPAAPA AEDGQWESF
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