More than 300 homologs were found in PanDaTox collection
for query gene Bphyt_0409 on replicon NC_010681
Organism: Burkholderia phytofirmans PsJN



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010676  Bphyt_6645  methyl-accepting chemotaxis sensory transducer  62.39 
 
 
583 aa  635    Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.983597 
 
 
-
 
NC_012856  Rpic12D_1771  methyl-accepting chemotaxis sensory transducer  72.51 
 
 
520 aa  714    Ralstonia pickettii 12D  Bacteria  normal  normal  0.841752 
 
 
-
 
NC_007511  Bcep18194_B1523  methyl-accepting chemotaxis sensory transducer  68.8 
 
 
539 aa  663    Burkholderia sp. 383  Bacteria  normal  normal  0.377846 
 
 
-
 
NC_010515  Bcenmc03_5865  methyl-accepting chemotaxis sensory transducer  68.22 
 
 
539 aa  640    Burkholderia cenocepacia MC0-3  Bacteria  normal  0.439663  normal 
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  100 
 
 
585 aa  1162    Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4332  methyl-accepting chemotaxis sensory transducer  67.75 
 
 
545 aa  661    Burkholderia ambifaria MC40-6  Bacteria  normal  0.167851  normal 
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  85.49 
 
 
587 aa  946    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_2095  methyl-accepting chemotaxis sensory transducer  72.51 
 
 
520 aa  714    Ralstonia pickettii 12J  Bacteria  normal  0.649492  normal  0.265934 
 
 
-
 
NC_007974  Rmet_5306  methyl-accepting chemotaxis sensory transducer  65 
 
 
565 aa  651    Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00488588  normal  0.0415564 
 
 
-
 
NC_008061  Bcen_3926  methyl-accepting chemotaxis sensory transducer  66.6 
 
 
539 aa  638    Burkholderia cenocepacia AU 1054  Bacteria  normal  0.279293  n/a   
 
 
-
 
NC_008543  Bcen2424_4440  methyl-accepting chemotaxis sensory transducer  66.6 
 
 
539 aa  638    Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5868  methyl-accepting chemotaxis sensory transducer  63.9 
 
 
541 aa  603  1.0000000000000001e-171  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2374  methyl-accepting chemotaxis protein  65.26 
 
 
586 aa  583  1.0000000000000001e-165  Burkholderia thailandensis E264  Bacteria  normal  0.205822  n/a   
 
 
-
 
NC_007434  BURPS1710b_2139  methyl-accepting chemotaxis protein  63.92 
 
 
616 aa  578  1e-164  Burkholderia pseudomallei 1710b  Bacteria  normal  0.942679  n/a   
 
 
-
 
NC_010086  Bmul_4184  methyl-accepting chemotaxis sensory transducer  68.93 
 
 
493 aa  575  1.0000000000000001e-163  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA1130  methyl-accepting chemotaxis protein  63.92 
 
 
580 aa  578  1.0000000000000001e-163  Burkholderia mallei ATCC 23344  Bacteria  normal  0.306094  n/a   
 
 
-
 
NC_008836  BMA10229_A0232  methyl-accepting chemotaxis protein  63.92 
 
 
580 aa  578  1.0000000000000001e-163  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1571  methyl-accepting chemotaxis protein  63.92 
 
 
580 aa  578  1.0000000000000001e-163  Burkholderia mallei SAVP1  Bacteria  normal  0.295886  n/a   
 
 
-
 
NC_009080  BMA10247_0927  methyl-accepting chemotaxis protein  63.92 
 
 
580 aa  578  1.0000000000000001e-163  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2002  methyl-accepting chemotaxis protein  63.92 
 
 
580 aa  578  1.0000000000000001e-163  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1983  methyl-accepting chemotaxis protein  63.92 
 
 
580 aa  572  1.0000000000000001e-162  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6305  methyl-accepting chemotaxis sensory transducer  57.44 
 
 
528 aa  517  1.0000000000000001e-145  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008062  Bcen_6464  methyl-accepting chemotaxis sensory transducer  57.63 
 
 
528 aa  518  1.0000000000000001e-145  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6699  methyl-accepting chemotaxis sensory transducer  57.63 
 
 
528 aa  518  1.0000000000000001e-145  Burkholderia cenocepacia HI2424  Bacteria  normal  0.971949  normal  0.6752 
 
 
-
 
NC_010002  Daci_0742  methyl-accepting chemotaxis sensory transducer  53.04 
 
 
581 aa  487  1e-136  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  52.86 
 
 
618 aa  484  1e-135  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  51.54 
 
 
520 aa  472  1e-132  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_008752  Aave_2284  methyl-accepting chemotaxis sensory transducer  50 
 
 
547 aa  471  1.0000000000000001e-131  Acidovorax citrulli AAC00-1  Bacteria  normal  0.206976  hitchhiker  0.0000952985 
 
 
-
 
NC_003295  RSc1894  methyl-accepting chemotaxis transducer transmembrane protein  52.68 
 
 
535 aa  465  9.999999999999999e-131  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0710104  normal  0.94486 
 
 
-
 
NC_007336  Reut_C6240  chemotaxis sensory transducer  49.28 
 
 
556 aa  462  1e-129  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2548  methyl-accepting chemotaxis protein  54.91 
 
 
525 aa  462  1e-129  Methylibium petroleiphilum PM1  Bacteria  decreased coverage  0.00975221  normal  0.500866 
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  49.9 
 
 
539 aa  437  1e-121  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_003295  RSc1950  methyl-accepting chemotaxis transducer transmembrane protein  71.02 
 
 
329 aa  417  9.999999999999999e-116  Ralstonia solanacearum GMI1000  Bacteria  normal  0.265012  normal  0.886741 
 
 
-
 
NC_008826  Mpe_B0133  methyl-accepting chemotaxis protein  51.35 
 
 
526 aa  417  9.999999999999999e-116  Methylibium petroleiphilum PM1  Bacteria  normal  0.845076  hitchhiker  0.000223015 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  54.44 
 
 
559 aa  390  1e-107  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007650  BTH_II1955  methyl-accepting chemotaxis protein  75.57 
 
 
685 aa  390  1e-107  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  43.49 
 
 
578 aa  387  1e-106  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0627  methyl-accepting chemotaxis protein  73.94 
 
 
616 aa  382  1e-105  Burkholderia pseudomallei 1106a  Bacteria  normal  0.202062  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2013  methyl-accepting chemotaxis protein  73.94 
 
 
634 aa  383  1e-105  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  47.69 
 
 
513 aa  383  1e-105  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A0719  methyl-accepting chemotaxis protein  73.94 
 
 
616 aa  382  1e-104  Burkholderia pseudomallei 668  Bacteria  normal  0.152122  n/a   
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  62.5 
 
 
575 aa  379  1e-104  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  44.55 
 
 
580 aa  379  1e-103  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  48.33 
 
 
586 aa  379  1e-103  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  43.33 
 
 
537 aa  374  1e-102  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  54.05 
 
 
513 aa  369  1e-101  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  59.57 
 
 
566 aa  365  1e-99  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  55.53 
 
 
583 aa  364  2e-99  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  45.9 
 
 
559 aa  364  2e-99  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  57.65 
 
 
572 aa  364  3e-99  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  47.66 
 
 
588 aa  362  9e-99  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_012912  Dd1591_0695  methyl-accepting chemotaxis sensory transducer  41.12 
 
 
561 aa  362  1e-98  Dickeya zeae Ech1591  Bacteria  normal  0.305861  n/a   
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  51.85 
 
 
595 aa  359  6e-98  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  55.56 
 
 
587 aa  358  9.999999999999999e-98  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  51.6 
 
 
552 aa  357  1.9999999999999998e-97  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  51.98 
 
 
569 aa  358  1.9999999999999998e-97  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  43.73 
 
 
592 aa  358  1.9999999999999998e-97  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  42.64 
 
 
586 aa  357  2.9999999999999997e-97  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  50.84 
 
 
562 aa  357  3.9999999999999996e-97  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  41.48 
 
 
543 aa  355  1e-96  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2002  methyl-accepting chemotaxis sensory transducer  48.5 
 
 
601 aa  354  2.9999999999999997e-96  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  56.6 
 
 
617 aa  353  4e-96  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  47.05 
 
 
567 aa  353  7e-96  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  43.68 
 
 
552 aa  352  8.999999999999999e-96  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  42.81 
 
 
570 aa  352  1e-95  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  57.07 
 
 
618 aa  352  1e-95  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  52.36 
 
 
589 aa  351  2e-95  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  48.94 
 
 
580 aa  351  2e-95  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  42.54 
 
 
549 aa  350  4e-95  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  42.3 
 
 
511 aa  350  5e-95  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  41.81 
 
 
554 aa  349  7e-95  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  60.92 
 
 
551 aa  349  1e-94  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  63.72 
 
 
584 aa  349  1e-94  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_012917  PC1_4071  methyl-accepting chemotaxis sensory transducer  41.03 
 
 
553 aa  348  2e-94  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  56.01 
 
 
752 aa  346  5e-94  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  60.45 
 
 
622 aa  346  8e-94  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  60.4 
 
 
733 aa  345  8.999999999999999e-94  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  55.56 
 
 
661 aa  345  1e-93  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  52.14 
 
 
579 aa  345  1e-93  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  54.73 
 
 
527 aa  345  1e-93  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_013421  Pecwa_4354  methyl-accepting chemotaxis sensory transducer  42.78 
 
 
555 aa  344  2e-93  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  60.18 
 
 
585 aa  344  2e-93  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  53.58 
 
 
542 aa  345  2e-93  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  64.5 
 
 
615 aa  344  2e-93  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  64.5 
 
 
615 aa  344  2e-93  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  63.86 
 
 
584 aa  345  2e-93  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  43.44 
 
 
585 aa  344  2.9999999999999997e-93  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  59.12 
 
 
576 aa  344  2.9999999999999997e-93  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_010625  Bphy_5592  methyl-accepting chemotaxis sensory transducer  48.12 
 
 
567 aa  344  2.9999999999999997e-93  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  57.36 
 
 
573 aa  343  5e-93  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  62.54 
 
 
598 aa  343  5e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  59.62 
 
 
653 aa  343  7e-93  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  40.98 
 
 
553 aa  343  7e-93  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  44.04 
 
 
584 aa  342  9e-93  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  57.93 
 
 
558 aa  342  9e-93  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  59.62 
 
 
653 aa  342  9e-93  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS02364  putative methyl-accepting chemotaxis transducer transmembrane protein  58.77 
 
 
524 aa  342  1e-92  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0291845 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  61.23 
 
 
650 aa  342  1e-92  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  41.38 
 
 
559 aa  341  2e-92  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  57.77 
 
 
600 aa  341  2.9999999999999998e-92  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
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