More than 300 homologs were found in PanDaTox collection
for query gene RS02364 on replicon NC_003296
Organism: Ralstonia solanacearum GMI1000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003296  RS02364  putative methyl-accepting chemotaxis transducer transmembrane protein  100 
 
 
524 aa  1040    Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0291845 
 
 
-
 
NC_010552  BamMC406_3664  methyl-accepting chemotaxis sensory transducer  59.53 
 
 
562 aa  567  1e-160  Burkholderia ambifaria MC40-6  Bacteria  normal  0.248385  normal  0.243257 
 
 
-
 
NC_010515  Bcenmc03_3751  methyl-accepting chemotaxis sensory transducer  58.03 
 
 
564 aa  540  9.999999999999999e-153  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.208452  normal 
 
 
-
 
NC_008061  Bcen_4591  methyl-accepting chemotaxis sensory transducer  57.78 
 
 
565 aa  535  1e-151  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.521693  n/a   
 
 
-
 
NC_008543  Bcen2424_3772  methyl-accepting chemotaxis sensory transducer  57.78 
 
 
565 aa  535  1e-151  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.430546 
 
 
-
 
NC_007348  Reut_B3808  histidine kinase, HAMP region: chemotaxis sensory transducer  53.45 
 
 
569 aa  499  1e-140  Ralstonia eutropha JMP134  Bacteria  normal  0.880796  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  44.95 
 
 
572 aa  353  4e-96  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  58.77 
 
 
585 aa  351  2e-95  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5306  methyl-accepting chemotaxis sensory transducer  44.02 
 
 
565 aa  348  1e-94  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00488588  normal  0.0415564 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  48.64 
 
 
554 aa  338  9.999999999999999e-92  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  44.06 
 
 
553 aa  337  2.9999999999999997e-91  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  44.49 
 
 
580 aa  336  5e-91  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  56.45 
 
 
569 aa  336  7e-91  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  42.83 
 
 
587 aa  335  1e-90  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  44.36 
 
 
575 aa  333  6e-90  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_007511  Bcep18194_B1523  methyl-accepting chemotaxis sensory transducer  43.87 
 
 
539 aa  332  7.000000000000001e-90  Burkholderia sp. 383  Bacteria  normal  normal  0.377846 
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  44.87 
 
 
588 aa  330  3e-89  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  42.17 
 
 
596 aa  330  3e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008392  Bamb_6127  methyl-accepting chemotaxis sensory transducer  50.25 
 
 
519 aa  331  3e-89  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0128017 
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  46.63 
 
 
608 aa  329  8e-89  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  46.63 
 
 
608 aa  329  8e-89  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_010557  BamMC406_5887  methyl-accepting chemotaxis sensory transducer  50.13 
 
 
519 aa  329  9e-89  Burkholderia ambifaria MC40-6  Bacteria  normal  0.330697  normal 
 
 
-
 
NC_010552  BamMC406_4332  methyl-accepting chemotaxis sensory transducer  44.8 
 
 
545 aa  328  1.0000000000000001e-88  Burkholderia ambifaria MC40-6  Bacteria  normal  0.167851  normal 
 
 
-
 
NC_003296  RSp0303  methyl-accepting chemotaxis transmembrane protein  46.64 
 
 
515 aa  328  1.0000000000000001e-88  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0248188 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  47.6 
 
 
600 aa  328  1.0000000000000001e-88  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3926  methyl-accepting chemotaxis sensory transducer  44.78 
 
 
539 aa  328  1.0000000000000001e-88  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.279293  n/a   
 
 
-
 
NC_008543  Bcen2424_4440  methyl-accepting chemotaxis sensory transducer  44.78 
 
 
539 aa  328  1.0000000000000001e-88  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  53.49 
 
 
567 aa  327  2.0000000000000001e-88  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5865  methyl-accepting chemotaxis sensory transducer  44.21 
 
 
539 aa  327  4.0000000000000003e-88  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.439663  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  54.65 
 
 
585 aa  327  5e-88  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  42.64 
 
 
576 aa  326  6e-88  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_007951  Bxe_A2002  methyl-accepting chemotaxis sensory transducer  43.8 
 
 
601 aa  325  9e-88  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  55.79 
 
 
652 aa  325  1e-87  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6305  methyl-accepting chemotaxis sensory transducer  46.49 
 
 
528 aa  325  1e-87  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  55.19 
 
 
562 aa  325  1e-87  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  55.19 
 
 
566 aa  324  2e-87  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_007348  Reut_B5868  methyl-accepting chemotaxis sensory transducer  58.47 
 
 
541 aa  323  4e-87  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0160  methyl-accepting chemotaxis sensory transducer  45.15 
 
 
513 aa  323  4e-87  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  54.43 
 
 
661 aa  323  5e-87  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  44.71 
 
 
608 aa  323  5e-87  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  58.57 
 
 
513 aa  322  8e-87  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  44.42 
 
 
650 aa  322  9.000000000000001e-87  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  41.86 
 
 
535 aa  322  9.000000000000001e-87  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  47.76 
 
 
584 aa  322  9.999999999999999e-87  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  53.73 
 
 
589 aa  322  9.999999999999999e-87  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_010551  BamMC406_1527  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
587 aa  322  9.999999999999999e-87  Burkholderia ambifaria MC40-6  Bacteria  normal  0.512784  normal  0.576949 
 
 
-
 
NC_007510  Bcep18194_A4750  methyl-accepting chemotaxis sensory transducer  46.86 
 
 
612 aa  321  1.9999999999999998e-86  Burkholderia sp. 383  Bacteria  normal  normal  0.445402 
 
 
-
 
NC_008062  Bcen_6464  methyl-accepting chemotaxis sensory transducer  45.26 
 
 
528 aa  321  1.9999999999999998e-86  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6699  methyl-accepting chemotaxis sensory transducer  45.26 
 
 
528 aa  321  1.9999999999999998e-86  Burkholderia cenocepacia HI2424  Bacteria  normal  0.971949  normal  0.6752 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  54.52 
 
 
543 aa  320  3e-86  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  55.96 
 
 
549 aa  320  3e-86  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_012880  Dd703_3489  methyl-accepting chemotaxis sensory transducer  40.39 
 
 
530 aa  320  3.9999999999999996e-86  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  44.05 
 
 
615 aa  320  5e-86  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  44.05 
 
 
615 aa  320  5e-86  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_1588  methyl-accepting chemotaxis sensory transducer  45.44 
 
 
588 aa  320  5e-86  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.834305  normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  59.76 
 
 
559 aa  320  5e-86  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  44.56 
 
 
579 aa  318  2e-85  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  42.14 
 
 
532 aa  318  2e-85  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  43.31 
 
 
592 aa  317  3e-85  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_007953  Bxe_C0847  methyl-accepting chemotaxis sensory transducer  53.01 
 
 
516 aa  317  3e-85  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.024141 
 
 
-
 
NC_010086  Bmul_4184  methyl-accepting chemotaxis sensory transducer  57.7 
 
 
493 aa  317  4e-85  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  57.23 
 
 
586 aa  316  6e-85  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  42.17 
 
 
583 aa  316  8e-85  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_010676  Bphyt_6645  methyl-accepting chemotaxis sensory transducer  45.22 
 
 
583 aa  315  9e-85  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.983597 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  58.02 
 
 
595 aa  315  9e-85  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_003295  RSc1460  methyl-accepting chemotaxis transducer transmembrane protein  59.28 
 
 
513 aa  315  9.999999999999999e-85  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.75608 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  56.88 
 
 
559 aa  314  1.9999999999999998e-84  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_010681  Bphyt_0620  methyl-accepting chemotaxis sensory transducer  46.62 
 
 
549 aa  315  1.9999999999999998e-84  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0437284 
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  43.83 
 
 
618 aa  314  1.9999999999999998e-84  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_010622  Bphy_1232  methyl-accepting chemotaxis sensory transducer  45.84 
 
 
595 aa  314  1.9999999999999998e-84  Burkholderia phymatum STM815  Bacteria  normal  0.0384777  normal  0.175298 
 
 
-
 
NC_007651  BTH_I2470  methyl-accepting chemotaxis protein  57.75 
 
 
616 aa  314  2.9999999999999996e-84  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2095  methyl-accepting chemotaxis sensory transducer  49.53 
 
 
520 aa  313  5.999999999999999e-84  Ralstonia pickettii 12J  Bacteria  normal  0.649492  normal  0.265934 
 
 
-
 
NC_012856  Rpic12D_1408  methyl-accepting chemotaxis sensory transducer  44.94 
 
 
513 aa  313  5.999999999999999e-84  Ralstonia pickettii 12D  Bacteria  normal  0.0312904  normal  0.0311205 
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  57 
 
 
630 aa  313  6.999999999999999e-84  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  57.1 
 
 
562 aa  312  7.999999999999999e-84  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_012880  Dd703_2108  methyl-accepting chemotaxis sensory transducer  56.17 
 
 
556 aa  311  1e-83  Dickeya dadantii Ech703  Bacteria  normal  0.0190315  n/a   
 
 
-
 
NC_013421  Pecwa_2831  methyl-accepting chemotaxis sensory transducer  47.13 
 
 
554 aa  311  1e-83  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1771  methyl-accepting chemotaxis sensory transducer  49.53 
 
 
520 aa  312  1e-83  Ralstonia pickettii 12D  Bacteria  normal  normal  0.841752 
 
 
-
 
NC_012912  Dd1591_3723  methyl-accepting chemotaxis sensory transducer  41.96 
 
 
539 aa  312  1e-83  Dickeya zeae Ech1591  Bacteria  normal  0.359916  n/a   
 
 
-
 
NC_007952  Bxe_B2520  methyl-accepting chemotaxis sensory transducer  41.17 
 
 
542 aa  312  1e-83  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.128174 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  43.27 
 
 
589 aa  311  1e-83  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_007974  Rmet_5250  methyl-accepting chemotaxis protein, sensory transducer  57.89 
 
 
677 aa  312  1e-83  Cupriavidus metallidurans CH34  Bacteria  normal  0.0837898  normal  0.0130353 
 
 
-
 
NC_008060  Bcen_1131  methyl-accepting chemotaxis sensory transducer  46.07 
 
 
588 aa  312  1e-83  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1611  methyl-accepting chemotaxis sensory transducer  46.07 
 
 
588 aa  312  1e-83  Burkholderia cenocepacia HI2424  Bacteria  normal  0.542582  n/a   
 
 
-
 
NC_009832  Spro_0080  methyl-accepting chemotaxis sensory transducer  55.18 
 
 
642 aa  311  2e-83  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  51.07 
 
 
613 aa  311  2e-83  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  56.35 
 
 
628 aa  311  2e-83  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  41.78 
 
 
584 aa  310  2.9999999999999997e-83  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  50.12 
 
 
579 aa  310  2.9999999999999997e-83  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  44.05 
 
 
513 aa  310  4e-83  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  46.41 
 
 
552 aa  310  4e-83  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_007510  Bcep18194_A4084  methyl-accepting chemotaxis sensory transducer  57.93 
 
 
511 aa  310  5e-83  Burkholderia sp. 383  Bacteria  normal  0.51282  normal  0.262349 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  41.98 
 
 
570 aa  310  5.9999999999999995e-83  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  42.5 
 
 
580 aa  309  6.999999999999999e-83  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0129  methyl-accepting chemotaxis sensory transducer  46.14 
 
 
511 aa  309  6.999999999999999e-83  Burkholderia xenovorans LB400  Bacteria  normal  0.469561  normal 
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  42.4 
 
 
617 aa  309  6.999999999999999e-83  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  42.5 
 
 
578 aa  309  6.999999999999999e-83  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  50 
 
 
527 aa  309  8e-83  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008390  Bamb_1508  methyl-accepting chemotaxis sensory transducer  48.98 
 
 
587 aa  308  1.0000000000000001e-82  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  56.23 
 
 
585 aa  309  1.0000000000000001e-82  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
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