| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1950 |
|---|
| Symbol | |
|---|
| ID | 1220790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 2126240 |
|---|
| End bp | 2127229 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637238344 |
|---|
| Product | methyl-accepting chemotaxis transducer transmembrane protein |
|---|
| Protein accession | NP_520071 |
|---|
| Protein GI | 17546669 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.265012 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.886741 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTCGGA GCAGGCCCGC GATCGACCGC GTGGAAGCCC GCTACGGCCC CGTGGCCACC
GGGATCGTGC AACTGGCGCT GGACGGCAAG CGCGACGAGG CCATCCAGAA GATGGACGAC
GAATGCCGTC CGCTGCTGGT CGAGCTGATC CAGGCCACCA CCGCCTACGC CCGCTATACG
CGCGAACGCC AGGAGCAGCT CGTCGCGGCT GACGAAGCGC AGTATGGGCA GCAGCGCAGC
CTGCTGATCG CGCTGTCGAT CGCGGCGGTG CTCGTGGCGA TCGGGGCGGG CGTGCTGATC
ACGCGCTCGA TCACGCGCCC CATCGGCAAG GCCGTGAACG TGGCGGAGAC GGTGGCCCGC
GGCGACCTCG GCAGCCGCAT CGACGCCGAA GGCACCGACG AGACCAGCCA CCGGCTCGCC
GCGCTCGCCG ACATGAACAC CCGCCTGACG CAGATCGTCG ACAAGGTGCG CGACAGCAGC
GGCAGCATCG CCGGCGCGGC CAGGCCGATC GCGGCGGGCA ACGCCGACCT GAGCCAGCGC
ACCGAAGCGC AGGCCTCCTC GCTGCAGGAA ACCGCCGCCG GCATGGAAGA GCTGACCTCC
ACCGTAAAGC AGAACGCCGA CAATGCCCAG CACGCCACCG AACTGGCCGC GACGGCGTCG
GAGGTGGCGC AGAAGGGCAA CGCCGTGGTG AGCCAGGTGG TCTCGACCAT GCAGGCCATC
AGCGACCGCT CCGGCAAGAT CGCGGAGATC ACCAGCATCA TCGAGGGGAT TGCCTTCCAG
ACCAACATCC TGGCCCTGAA CGCCGCGGTG GAAGCCGCCC GCGCGGGCGA TCAGGGACGG
GGCTTCGCGG TGGTCGCCAA CGAGGTGCGC AGCCTCGCGC AGCGCTCTGC CAAGGCGGCC
AAGGAGATCA AGAGGCTGAT CGCCTCGTCG GTCGAGCGCA TCCACGACAG CTCGACGCTG
GCGACGCGCT ACAGCGGATC GCGCAGATAG
|
|---|
| Protein sequence | MCRSRPAIDR VEARYGPVAT GIVQLALDGK RDEAIQKMDD ECRPLLVELI QATTAYARYT
RERQEQLVAA DEAQYGQQRS LLIALSIAAV LVAIGAGVLI TRSITRPIGK AVNVAETVAR
GDLGSRIDAE GTDETSHRLA ALADMNTRLT QIVDKVRDSS GSIAGAARPI AAGNADLSQR
TEAQASSLQE TAAGMEELTS TVKQNADNAQ HATELAATAS EVAQKGNAVV SQVVSTMQAI
SDRSGKIAEI TSIIEGIAFQ TNILALNAAV EAARAGDQGR GFAVVANEVR SLAQRSAKAA
KEIKRLIASS VERIHDSSTL ATRYSGSRR
|
|---|
| |