| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0695 |
|---|
| Symbol | |
|---|
| ID | 8119738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 797748 |
|---|
| End bp | 799433 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644851083 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_003003055 |
|---|
| Protein GI | 251788334 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.305861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTAT CTGATTGGCG AATCGGGTAT CGTCTGGGGG CGGGCTTTGC CGTCCTGGCG
GTGATGCTGG TCTTTGTCGG CATGTTATCA ATAGCGAAGC TGTCGGGCTT TCATGACGAT
GCTCGTGACA TTGTGCAGAA GATTTATCCC CAAACCGTTG ATGCTAATGC GCTGATAGAA
GATGTGAATG AAGCCGTCCG AATTTCTCAG CAGTTAATGT TGGTATCGGG CGATGACCGT
ATCAAGGCGG TATCCGACCA GATTCCCCCG CTTTCAAAAG ACATTACCCG GCTGATGGAT
GCATTGGTAA AACATGCTGA TGAATCTCAG GATGCGAAGA GTCAAGCGTT GATCAGCGAT
ATACATCGTA TTCGCGTTCA GTTTCTGGCA TCGGGGCAAA AAATCGGCGA GCTGGTAAAA
AACCACGACC GGGAAGCGGC GTTGGAGGAA TTTAATCAGC ATCTGGACCC GACGCAGCGG
GAGTATCGTA ATGCGGTGCG CCGGTTGGTG GATTACCATA ACAAGGCCAT GTTAGGTACC
ATTGATACCA TGTCGTCCAC GTATCACGAC ATCCGGCTGG TGTTGCTGAT GATTCTGGGC
GGCGGCGTGT TGTTGAGTAT CTGGGTGGCA ACGGCGATCA CCCGCAGTGT TACCCAGCCG
ATTCAGCAAG CCTTGGTGAT GGCGGATCGC GTCTCGCAGG GCGACCTTTC CTCACACATT
TCCTCACACC GCAAAGATGA AGCGGGGCGG CTGTTGCAGG CGCTGGATCA CATGAACGCC
AGCCTGCGCC AAATCGTCGG GCAGGTACGC GACGGTGCCG AGGCCATCTC CTCCGCCGCT
TCACAAATCG CCGCCGGCAA TCAGGATCTC TCTTCCCGTA CTGAAGAACA GGCCAGTTCG
CTGGAACAAA CGGCGGCATC AATGGAAGAG TTGGTTTCGA CGATTAAAAA CACCGCAGAC
AACACCCGGC AGGCAACGTC GATCGCCAAT CAGGCATCGT CGGCGGCGCA TCGCAGCGGT
GAAGTGATGC TGTCCGTCAC CAGTAAAATG CGCGGCATTC GCGAATCTTC GATGCGGATG
GCGGAAATTA TCGGCGTCAT CGACGGTATT GCTTTCCAGA CTAATATTCT GGCGTTGAAC
GCCGCGGTGG AAGCCGCGCG CGCAGGCGAG CAAGGGCGTG GGTTTGCGGT GGTGGCGGGC
GAAGTCCGTT CGCTGGCGCA ACGCAGCGCC ACCGCCGCCA AAGAGATCAA AGAACTGATC
GATGATTCGG TGGATAAGAT TCAGGAAGGA ATGGACCTGG TGGATAGCGC CGAATCCACC
ATGAATAACC TGACCAACCA CGTTAATGAT GTACATGGCA TCATCAACGA GATCTCGCAG
GCCAGCCATG AGCAGAGCGA CGGCATCAGC CAGATCAACA TCGCCGTCGG GCAGATCGAC
ACCACCACCC AGCAGAATGC CGCGCTGGTG GAAGAATCGG CCTCAGCCGC GTTGTCGTTG
CAGTCTCAGG CCGCGCAACT GGCCGAAGCG GTCAGCGCGT TTCGCCTGAC GCCGCAAGGT
AACAGCAGCG CAACGTCGCC AGCCCGTCAG TCAGCGGTGC TATCTCCGGC GCTGCCGGTT
CGCCCGGCCG TGACTGAAAG ACGGGCCGCT GCCATCGGCA GCAATAGCGA CTGGACGTCG
TTCTGA
|
|---|
| Protein sequence | MRLSDWRIGY RLGAGFAVLA VMLVFVGMLS IAKLSGFHDD ARDIVQKIYP QTVDANALIE
DVNEAVRISQ QLMLVSGDDR IKAVSDQIPP LSKDITRLMD ALVKHADESQ DAKSQALISD
IHRIRVQFLA SGQKIGELVK NHDREAALEE FNQHLDPTQR EYRNAVRRLV DYHNKAMLGT
IDTMSSTYHD IRLVLLMILG GGVLLSIWVA TAITRSVTQP IQQALVMADR VSQGDLSSHI
SSHRKDEAGR LLQALDHMNA SLRQIVGQVR DGAEAISSAA SQIAAGNQDL SSRTEEQASS
LEQTAASMEE LVSTIKNTAD NTRQATSIAN QASSAAHRSG EVMLSVTSKM RGIRESSMRM
AEIIGVIDGI AFQTNILALN AAVEAARAGE QGRGFAVVAG EVRSLAQRSA TAAKEIKELI
DDSVDKIQEG MDLVDSAEST MNNLTNHVND VHGIINEISQ ASHEQSDGIS QINIAVGQID
TTTQQNAALV EESASAALSL QSQAAQLAEA VSAFRLTPQG NSSATSPARQ SAVLSPALPV
RPAVTERRAA AIGSNSDWTS F
|
|---|
| |