More than 300 homologs were found in PanDaTox collection
for query gene Rfer_2507 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  100 
 
 
589 aa  1170    Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  56.88 
 
 
591 aa  558  1e-158  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_008786  Veis_0400  methyl-accepting chemotaxis sensory transducer  53.04 
 
 
602 aa  552  1e-156  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  57.98 
 
 
591 aa  549  1e-155  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_010002  Daci_5082  methyl-accepting chemotaxis sensory transducer  60.94 
 
 
589 aa  539  9.999999999999999e-153  Delftia acidovorans SPH-1  Bacteria  normal  0.678642  normal  0.0204532 
 
 
-
 
NC_008752  Aave_1344  methyl-accepting chemotaxis sensory transducer  56.75 
 
 
536 aa  502  1e-141  Acidovorax citrulli AAC00-1  Bacteria  normal  0.129873  normal  0.199885 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  50 
 
 
584 aa  424  1e-117  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  48.24 
 
 
559 aa  413  1e-114  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  45.75 
 
 
569 aa  403  1e-111  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  44.54 
 
 
578 aa  399  9.999999999999999e-111  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  44.3 
 
 
583 aa  401  9.999999999999999e-111  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  65.84 
 
 
554 aa  396  1e-109  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_008782  Ajs_3430  methyl-accepting chemotaxis sensory transducer  46.28 
 
 
584 aa  396  1e-109  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  46.62 
 
 
580 aa  389  1e-107  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  46.63 
 
 
513 aa  388  1e-106  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  49.62 
 
 
559 aa  386  1e-106  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_011992  Dtpsy_2762  methyl-accepting chemotaxis sensory transducer  45.78 
 
 
584 aa  387  1e-106  Acidovorax ebreus TPSY  Bacteria  normal  0.636912  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  44.36 
 
 
542 aa  387  1e-106  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  52.29 
 
 
594 aa  387  1e-106  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  45.24 
 
 
552 aa  385  1e-105  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  45.22 
 
 
513 aa  383  1e-105  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  46.92 
 
 
577 aa  378  1e-103  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_010002  Daci_0036  methyl-accepting chemotaxis sensory transducer  59.48 
 
 
567 aa  370  1e-101  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  45.54 
 
 
586 aa  372  1e-101  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  53.79 
 
 
550 aa  370  1e-101  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  46.08 
 
 
592 aa  369  1e-101  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  63.23 
 
 
622 aa  368  1e-100  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  45.99 
 
 
581 aa  365  1e-99  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_010002  Daci_5410  methyl-accepting chemotaxis sensory transducer  46.36 
 
 
635 aa  365  2e-99  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3659  methyl-accepting chemotaxis sensory transducer  55.83 
 
 
550 aa  364  2e-99  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  46.37 
 
 
579 aa  364  2e-99  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  45.85 
 
 
520 aa  364  3e-99  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  44.15 
 
 
537 aa  363  4e-99  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  54.96 
 
 
572 aa  363  6e-99  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  48.66 
 
 
516 aa  362  9e-99  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_008782  Ajs_4123  methyl-accepting chemotaxis sensory transducer  62.78 
 
 
674 aa  361  2e-98  Acidovorax sp. JS42  Bacteria  normal  0.162807  normal  0.87643 
 
 
-
 
NC_011992  Dtpsy_3481  methyl-accepting chemotaxis sensory transducer  62.78 
 
 
674 aa  361  2e-98  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  46.68 
 
 
508 aa  360  4e-98  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  47.52 
 
 
595 aa  358  9.999999999999999e-98  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_008752  Aave_0831  methyl-accepting chemotaxis sensory transducer  43.26 
 
 
561 aa  358  1.9999999999999998e-97  Acidovorax citrulli AAC00-1  Bacteria  normal  0.236088  normal  0.180731 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  41.01 
 
 
554 aa  357  3.9999999999999996e-97  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_011992  Dtpsy_1752  methyl-accepting chemotaxis sensory transducer  43.74 
 
 
523 aa  355  1e-96  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0227  methyl-accepting chemotaxis sensory transducer  47 
 
 
592 aa  355  1e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3119  methyl-accepting chemotaxis sensory transducer  61.56 
 
 
554 aa  352  8e-96  Rhodoferax ferrireducens T118  Bacteria  normal  0.813886  n/a   
 
 
-
 
NC_010002  Daci_3475  methyl-accepting chemotaxis sensory transducer  46.64 
 
 
520 aa  351  3e-95  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  53.15 
 
 
598 aa  349  8e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  44.36 
 
 
553 aa  348  1e-94  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  44.1 
 
 
525 aa  348  1e-94  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  65.38 
 
 
597 aa  348  1e-94  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  57.88 
 
 
585 aa  346  6e-94  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  52.18 
 
 
579 aa  345  1e-93  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008752  Aave_1343  methyl-accepting chemotaxis sensory transducer  44.85 
 
 
620 aa  344  2e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  0.244601  normal  0.213177 
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  49.88 
 
 
651 aa  345  2e-93  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  49.17 
 
 
596 aa  343  4e-93  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  49.25 
 
 
661 aa  343  4e-93  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  52.6 
 
 
548 aa  343  5e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4495  methyl-accepting chemotaxis sensory transducer  41.8 
 
 
605 aa  343  5.999999999999999e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0928828 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  56.39 
 
 
653 aa  342  8e-93  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  52.83 
 
 
527 aa  342  9e-93  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  56.39 
 
 
653 aa  342  1e-92  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2831  methyl-accepting chemotaxis sensory transducer  43.63 
 
 
554 aa  340  2.9999999999999998e-92  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  52.06 
 
 
579 aa  340  4e-92  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_012912  Dd1591_0695  methyl-accepting chemotaxis sensory transducer  47.17 
 
 
561 aa  340  4e-92  Dickeya zeae Ech1591  Bacteria  normal  0.305861  n/a   
 
 
-
 
NC_008752  Aave_0035  methyl-accepting chemotaxis sensory transducer  57.86 
 
 
558 aa  340  4e-92  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  45.21 
 
 
586 aa  339  8e-92  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  41.52 
 
 
543 aa  338  9.999999999999999e-92  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  56.72 
 
 
532 aa  339  9.999999999999999e-92  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  63.7 
 
 
615 aa  338  9.999999999999999e-92  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  63.7 
 
 
615 aa  338  9.999999999999999e-92  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_008752  Aave_4446  methyl-accepting chemotaxis sensory transducer  41.58 
 
 
605 aa  338  9.999999999999999e-92  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0260008  normal  0.622584 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  51.01 
 
 
650 aa  338  1.9999999999999998e-91  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  39.08 
 
 
567 aa  337  2.9999999999999997e-91  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  45.55 
 
 
579 aa  337  2.9999999999999997e-91  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  50.48 
 
 
536 aa  337  3.9999999999999995e-91  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  45.47 
 
 
580 aa  337  5e-91  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  52.17 
 
 
570 aa  336  5.999999999999999e-91  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  57.82 
 
 
618 aa  336  7e-91  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_008782  Ajs_3664  methyl-accepting chemotaxis sensory transducer  52.78 
 
 
598 aa  336  7e-91  Acidovorax sp. JS42  Bacteria  normal  0.197645  normal 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  56.99 
 
 
584 aa  335  1e-90  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_010524  Lcho_4044  methyl-accepting chemotaxis sensory transducer  55.49 
 
 
644 aa  335  1e-90  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0000000893288 
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  50.24 
 
 
587 aa  335  1e-90  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2526  methyl-accepting chemotaxis sensory transducer  47.32 
 
 
554 aa  335  1e-90  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  52.36 
 
 
585 aa  334  2e-90  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  54.95 
 
 
559 aa  335  2e-90  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  58.91 
 
 
433 aa  335  2e-90  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2081  methyl-accepting chemotaxis sensory transducer  49.88 
 
 
668 aa  334  2e-90  Dickeya dadantii Ech703  Bacteria  normal  0.622232  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  59.06 
 
 
578 aa  335  2e-90  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  64.38 
 
 
680 aa  335  2e-90  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  59.4 
 
 
617 aa  334  2e-90  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6240  chemotaxis sensory transducer  48.69 
 
 
556 aa  334  3e-90  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  54.48 
 
 
584 aa  334  3e-90  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0020  methyl-accepting chemotaxis sensory transducer  60.26 
 
 
550 aa  333  6e-90  Acidovorax sp. JS42  Bacteria  normal  normal  0.857372 
 
 
-
 
NC_012880  Dd703_0071  methyl-accepting chemotaxis sensory transducer  51.6 
 
 
630 aa  333  7.000000000000001e-90  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2764  methyl-accepting chemotaxis protein  42.27 
 
 
562 aa  333  7.000000000000001e-90  Burkholderia pseudomallei 668  Bacteria  normal  0.627836  n/a   
 
 
-
 
NC_012912  Dd1591_2086  methyl-accepting chemotaxis sensory transducer  48.01 
 
 
653 aa  332  8e-90  Dickeya zeae Ech1591  Bacteria  normal  0.0240769  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  54.05 
 
 
598 aa  332  8e-90  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0038  methyl-accepting chemotaxis sensory transducer  60.26 
 
 
550 aa  332  8e-90  Acidovorax ebreus TPSY  Bacteria  normal  0.398829  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  55.22 
 
 
573 aa  332  9e-90  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_008825  Mpe_A2548  methyl-accepting chemotaxis protein  51.88 
 
 
525 aa  332  1e-89  Methylibium petroleiphilum PM1  Bacteria  decreased coverage  0.00975221  normal  0.500866 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  55.43 
 
 
551 aa  332  1e-89  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
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