Gene Rpic_2095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2095 
Symbol 
ID6287942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2207007 
End bp2208569 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content65% 
IMG OID642625666 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001899661 
Protein GI187929174 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.649492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.265934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA AAGCCAAGCT GACCACGGGT TTTGGCGTGC TGGCAGCCAT TGTTGTCGTC 
GTGTCGGGCA TGTCGCTGCG GGCGCTGTCC GAATCGACCG AAGGATTCTC GAACTACGTG
CACGGCATCA GCGCCCGCGC AGACGTCGCG AACGACGTGC GCACGGCGGT GGATCGCCGC
GCCATTGCCG CACGCAACCT GGTACTCGTG GTCACCCAAA AAGACCTGGA TCTGGAGAAG
GCTGACGTCT TCCGTGCGCA CGACGATGTG AAGAACAAGC TCAAGCAGCT CAACGACATG
ATTGCGGGCG CCAAGGACGT AACCGACCGC GCCCGTACGC TGGTGGAAGA CATCAACCGC
GTGGAAGCAC AGTACGGCCC TGTGGCGACC GACATCGTCG GGCTGGCACT GGCCGGCAAA
CGCGACGAAG CCGTCCAGAA GATGGACAAC GAGTGCCGCC CGCTGCTGGC AGCGCTCATC
AAGACCACCG ACGCGTACGC CACCTACACG CACGAGCGCC AGGAACAGCT CGTGCAGGCA
TATGAGGCGC AGTACGTCAT GCAGCGCAAC CTGCTGGCCG GCCTGTCGAT CGGCGCGGTG
CTGCTGGCAG TGATCGCCGG CATGGTCATC ACGCGCTCGA TCACGCAGCC GATCCGCACC
GCCGTGAACG TCGCCCAGAC GGTGGCACGC GGCGATCTGA GCAGCCGCAT CGAGGTGCGC
GGCAAGGATG AGACGAGCCG CCTGCTCTCC GCCCTGCGTG ACATGAATGA CCGCCTGACC
GAGATCGTGG ACAAGGTGCG CGACAGCAGC AGCAGCGTTG CCGGTGCAGC CAAGCAGATT
GCCGCCGGCA ATGCCGACCT GAGCCAGCGC ACGGAAGCCC AGGCGTCGTC GCTGCAGGAA
ACAGCCGCCA GCATGGAAGA GCTGACGTCC ACCGTGAAGC AGAACGCCGA GAACGCCCAG
CACGCCACCG CGCTCGCCTC CACCGCGTCG GAGGTGGCGC TCAAGGGCAG CACGGTCGTC
AGCCAGGTCG TGTCCACCAT GCAGGACATC AGCGACCGTT CGAGCAAGAT CGCCGACATC
ACGGGCATCA TCGAAGGCAT TGCGTTTCAG ACCAACATCC TCGCGTTGAA CGCCGCCGTG
GAAGCCGCAC GTGCAGGCGA GCAGGGCCGC GGCTTTGCGG TGGTCGCCAG CGAAGTGCGC
AGCCTGGCGC AGCGTTCGTC AACGGCCGCC AAGGAGATCA AGGAACTGAT CGCCTCGTCG
GTGGAGCGCA TTCACGACGG CTCCACGCTG GCCGGAGAAG CCGGCGAGAC GATGACGGAG
GTCACGCAAG CCGTGGCCCG CGTCACGCAC ATCATGGAAG AGATTGCCGC TGCATCGGTC
GAGCAGAAGC GCGGCATCGA ACAGGTCAAT CAGGCGATCT CGCAAATGGA TGAAGTCACG
CAGCGCAATG CAGCGCTGGT GGAAGAGGCC GCCGCCGCAT CGCAATCGCT GCAGGACCAG
GGGCAGGAGC TGAACGCCAC GATGTCGTTC TTCCGAGTCG ATCCGCACGC CGTACACGCC
TGA
 
Protein sequence
MTIKAKLTTG FGVLAAIVVV VSGMSLRALS ESTEGFSNYV HGISARADVA NDVRTAVDRR 
AIAARNLVLV VTQKDLDLEK ADVFRAHDDV KNKLKQLNDM IAGAKDVTDR ARTLVEDINR
VEAQYGPVAT DIVGLALAGK RDEAVQKMDN ECRPLLAALI KTTDAYATYT HERQEQLVQA
YEAQYVMQRN LLAGLSIGAV LLAVIAGMVI TRSITQPIRT AVNVAQTVAR GDLSSRIEVR
GKDETSRLLS ALRDMNDRLT EIVDKVRDSS SSVAGAAKQI AAGNADLSQR TEAQASSLQE
TAASMEELTS TVKQNAENAQ HATALASTAS EVALKGSTVV SQVVSTMQDI SDRSSKIADI
TGIIEGIAFQ TNILALNAAV EAARAGEQGR GFAVVASEVR SLAQRSSTAA KEIKELIASS
VERIHDGSTL AGEAGETMTE VTQAVARVTH IMEEIAAASV EQKRGIEQVN QAISQMDEVT
QRNAALVEEA AAASQSLQDQ GQELNATMSF FRVDPHAVHA