Gene Dd1591_1879 details

Gene Information

• Locus tag: Dd1591_1879
• ID: 8119356
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: -
• Start bp: 2146796
• End bp: 2148781
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 644852270
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_003004208
• Protein GI: 251789487
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATACTA TTCTGCATAC CTATAACAAT CTGAAGGTTG GTAGTAAATT GGCGATAGGG 
TTCGGACTGA TTTTAATCAT GTCCGCCTTT ATCATGCTCT CGGGTGTTAA TGGTTTTCGT 
AATGTTGATG CTTATGTCGA TAAATCGATT ATCAGCAACG ACATTAATAG CAATTTGAAC 
GATGCCCGAC GTGCCCGCCT TACTTTTCAA TATACTCACG ACTACAACGC CATTAATACC 
GTCGGCGACC TGATGAAAAA GGTAGGTCAG TCGTTAAATC AGGCCGGCCA GCTTACCTGG 
AGCCCCGAGG CACAGAAATT ACTGGATCAG CTCAATGACG CCTATAAAAC CTATCTTCCC 
GGGCGGGACG CATTGATCAA AGCCGGCCAG CAGCGTGATG CCGTGGCGCA AAAATTCAAT 
CAGGATACCA GCGCCGGCGT CGTTACCACG TTGCGTACCC AGTTCGGCAA CAGTTCGTCG 
ACGCCGGAAT TAAAACTGGA ATTTGCCGGG CTGCTTGAAC AACTGTCTGA CATCCGTGAT 
CTGACGCATC AGTTGTTGCT GCAACCCTCC GAACAAATCG AATCCACCCT GCGCAAAGCC 
ATTGGCAACG CTCAGGTCGC GTTTAATCAA GCGCTGCCTA AATTCAGCGC GGAACAACAA 
GGGTGGTTGA ATCAAACCTG GCGTTTCTTC TCCGCTTATA ACGGCTACCT TACCGATTAC 
ATGACGGCTT TCCGGGATGA AAACACCGCG ACCAAAACCA TGACCGGTGC GGCAATCATT 
CTGGATAACG CTTCCAATGA TTTATACAAC AGCCAGTTGG CGCTGGTCAG TTCCACGACA 
ACCCGCTCAC AGTGGCAATT ACTGATTACC GGTCTGGTGA TCATCGCGAT CGGCATACTG 
ATGGCGTGGT GTATTACGTT GCTGATTACT CGCCCTTTGC ATCAGAGCCT GTCGCTGGCG 
GAGCAAATTG CTCAGGGTGA CCTGACCTCT TCCATCGACG TCAACCGCCG CGATGAGCTG 
GGTCAGTTGA TGGTGGCGAT GAATCAGATG AACAGTAAAC TGCGTGAGAC GATCGGCACC 
ATTCGTGAGG GCGTCAGCAA TGTCGCGCTA GCCGCATCGG AAATCGCCGC CGGCAATACC 
GATCTCTCCT CCCGCACCGA GCAGCAATCG GCCGCCGTCG TGGAAACCGC TGCCAGTATG 
GAACAGTTAA CCTCCACGGT GAAACAGAAC GCCGACAACG CCCATCACGC CTCGCAACTG 
GCTGCCGATG CCTCGGCTAA CGCCACCCGC GGCGGTGAGA TTGTCACCAA TGTCGTCAGT 
ACCATGAACG AGATCGCCGT CAGTTCCCGA CGCATCTCTG AAATCACTTC CGTCATCAAT 
GGCATCGCGT TCCAGACCAA CATTCTGGCG CTGAACGCGG CGGTAGAAGC AGCACGCGCC 
GGTGAGCAGG GCCGCGGCTT TGCGGTGGTG GCAGGCGAAG TCCGTAATTT GGCCCAGCGC 
AGCGCCCAGG CCGCCAAAGA GATTGAAACG TTGATCGGTG AGTCCGTCAC CCGCGTGAAC 
ACCGGTTCTA CACTGGTGGA AGATGCCGGT AAAACGATGG ATGAAATCAT CCGTTCTATC 
TCTCATGTGC ATGACATCAT GGATGAAATC GCCTCCGCTT CCGATGAGCA GAGCCGCGGT 
ATCAACCAGA TTTCCACCGC CGTCACCGAA ATGGACGCCA CCACCCAGCA AAACGCCGCG 
CTGGTGGAAG AATCGTCTGC CGCCGCTAAC TCGCTGGAAG AGCAGGCTCA AATGCTGGAA 
CAAGCGGTAT CGGTGTTCCG TCTGGGTAAT GACAGCATAG CGCCGCAGGT AAAACCACGC 
GCCGCCATCG GCACGAAAAA GCCGTTGATG CTGAATAAAT CTACGCTCAG GGTATCTTCT 
GCCGCCGCGA AAAAAGCGCC GACCGGTAAT ACCAAAAATG CCAAGGATGA CTGGGAGTCG 
TTCTGA 

 

Protein sequence

MNTILHTYNN LKVGSKLAIG FGLILIMSAF IMLSGVNGFR NVDAYVDKSI ISNDINSNLN 
DARRARLTFQ YTHDYNAINT VGDLMKKVGQ SLNQAGQLTW SPEAQKLLDQ LNDAYKTYLP 
GRDALIKAGQ QRDAVAQKFN QDTSAGVVTT LRTQFGNSSS TPELKLEFAG LLEQLSDIRD 
LTHQLLLQPS EQIESTLRKA IGNAQVAFNQ ALPKFSAEQQ GWLNQTWRFF SAYNGYLTDY 
MTAFRDENTA TKTMTGAAII LDNASNDLYN SQLALVSSTT TRSQWQLLIT GLVIIAIGIL 
MAWCITLLIT RPLHQSLSLA EQIAQGDLTS SIDVNRRDEL GQLMVAMNQM NSKLRETIGT 
IREGVSNVAL AASEIAAGNT DLSSRTEQQS AAVVETAASM EQLTSTVKQN ADNAHHASQL 
AADASANATR GGEIVTNVVS TMNEIAVSSR RISEITSVIN GIAFQTNILA LNAAVEAARA 
GEQGRGFAVV AGEVRNLAQR SAQAAKEIET LIGESVTRVN TGSTLVEDAG KTMDEIIRSI 
SHVHDIMDEI ASASDEQSRG INQISTAVTE MDATTQQNAA LVEESSAAAN SLEEQAQMLE 
QAVSVFRLGN DSIAPQVKPR AAIGTKKPLM LNKSTLRVSS AAAKKAPTGN TKNAKDDWES 
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