| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0772 |
|---|
| Symbol | |
|---|
| ID | 4669365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 829793 |
|---|
| End bp | 831631 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639821971 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_969144 |
|---|
| Protein GI | 120609466 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.343543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.663369 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGGGC AAGCAACAGG CCGCTGGACG ATGGCGCGGC GCTTGATGGC GATCAACACG
CTCATCTTCG TGCTGCTGGC GGTCTCGGCC GTCTCGATCT GGACCATGAT GGAGCGGCTC
AGCCGCGATG CCGAGATCGT GCGCGCCTAC AACGTTCCCC AGCTGCAGCG CATCGCCGAG
CTGGAACTGA ACGTCACGCG GGTCTCGCTG CAACTGCGGC ACGCCATCCT TTCGCGCACG
CCCGAAGAGC TCAACGCCAC CCTGGCGGAC ATCGCGGAAA AGCGCGCCCT GCTGCAGAAG
ACGCTGAAGG ACTTCGGAGA CAACATGATC TCCGACGACG GCCGCCAGGC CTATGCCCCG
ATCCCGGCGC TCATGGACGA GTTCTGGGCC ACCGGCACCG ACAACATCCG GCTCATCCAG
GCCGGCCGCA GGGATGAAGC GTTCGCCATG CTCGTGGACC GCACCATTCC CGCGCGCAAC
CGCCTGCTGG CGCCGCTCGG GAAGGAAAAG CAGCGCCAGG GCGACCGCCT GTCCGAGCGC
ATCAACGACG TGCAGGAACT CGCCGACACC GACCGCGACC TCGCCACGAT CGCGGTGCTG
GTCGTGGTGG CCTGCCTCGC CGGGCTGAGC TGGTACCTGC GCTCGGTCGT GCGCGAACTG
GGCGCGGACC CGCCCGATCT CAAGCGCGTG GCGCTGGCCG TGGCGGGGGG CGACCTGGCC
GTGGACGTGC CGGTGCGCGC GCGGGACGGC GCCAGCGTCA TGGCCGGCCT GGGCTCGATG
CGCGACCGGC TCGCGGCCGT GGTGACCACC GTGCGGTCCA GTTCGGAGAG CGTCTCTTCC
GCCAGCCGCG AGATCGCGGC GGGCAACCAC GACCTGTCCG CACGCACCGA GCGGCAGGCC
TCCGCGCTGC AGCAGACCGC CGCGTCCATG GAAGAACTCG GCTCGACCGT GCGCCGCAAC
GCCGACAGCG CGCGCCGCGC CAACGAACTG GCCCAGGCCG CCTCCAGCGT GGCGGCCGAT
GGCGGCACCG TCGTCGCGCA GGTGGTGGAC ACCATGAAGG AGATCCAGGA CAGCAGCCGG
CAGATCGGCG ACATCATCGG CGTGATCGAC GGCATCGCCT TCCAGACCAA CATCCTCGCG
CTGAACGCGG CGGTGGAGGC CGCACGCGCC GGCGAGCAGG GCCGCGGATT CGCCGTGGTG
GCGGCCGAGG TGCGCACCCT CGCGCAGCGC AGCGCCACGG CGGCCAGGGA GATCAAGGAG
CTCATCACCG GCAGCGTCGA GCGCGTGGGC CGCGGCAGCG GGCTCGTGGA CCGGGCGGGA
GCCACCATGA CGGAGGTCGT CGCCTCGATC CGCCGCGCCA CCGACCTGAT GGGCGAGATC
AGCGCCTCCA GCGCCGAGCA GAGCCAGGGC GTGGACCAGA TCGCCGAAGC CATCACCCAC
GTGGACCAGG CCACGCAGCA GAACGCCGCC CTGGTGGAGC AGATGGCCGC GGCGGCCAGC
AGCCTGAGCA CCCAGGCCGC CGAGCTGGTG CGCGCCGTGG AGGTGTTCCA GCTGGGGCGC
CCGCCAGCCG CCGCTGCGGT CCATGCACCG CACGCCGCAC CGCACGCCGC AGCGCCGGCA
GCTTCCGCCC ATGCCGCGCC GGCCGAGCCC CGCCGTCCGG CAGCGGTGCC GGCGCCGTCC
GCCGCGCGGG CCGCGCATCC GCCACGGCCC GTGCCGTCCC TGCCCGGCCG GAAGGGGGGA
ACGCCGCCGG CCGCCTCCAC CCCTGCGGCG CCCGCCGCCC GTTCCGCACC GGCCGCCTCT
CCCGCCGCGG CAGGGGCGGA CGACTGGGAA ATGTTCTGA
|
|---|
| Protein sequence | MEGQATGRWT MARRLMAINT LIFVLLAVSA VSIWTMMERL SRDAEIVRAY NVPQLQRIAE
LELNVTRVSL QLRHAILSRT PEELNATLAD IAEKRALLQK TLKDFGDNMI SDDGRQAYAP
IPALMDEFWA TGTDNIRLIQ AGRRDEAFAM LVDRTIPARN RLLAPLGKEK QRQGDRLSER
INDVQELADT DRDLATIAVL VVVACLAGLS WYLRSVVREL GADPPDLKRV ALAVAGGDLA
VDVPVRARDG ASVMAGLGSM RDRLAAVVTT VRSSSESVSS ASREIAAGNH DLSARTERQA
SALQQTAASM EELGSTVRRN ADSARRANEL AQAASSVAAD GGTVVAQVVD TMKEIQDSSR
QIGDIIGVID GIAFQTNILA LNAAVEAARA GEQGRGFAVV AAEVRTLAQR SATAAREIKE
LITGSVERVG RGSGLVDRAG ATMTEVVASI RRATDLMGEI SASSAEQSQG VDQIAEAITH
VDQATQQNAA LVEQMAAAAS SLSTQAAELV RAVEVFQLGR PPAAAAVHAP HAAPHAAAPA
ASAHAAPAEP RRPAAVPAPS AARAAHPPRP VPSLPGRKGG TPPAASTPAA PAARSAPAAS
PAAAGADDWE MF
|
|---|
| |