Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0111 |
Symbol | |
ID | 8131011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 135598 |
End bp | 137268 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644863381 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_003015709 |
Protein GI | 253686519 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTCA TCAAAAATAG CAGCCTGGGT AAAATGCTAG GGACAGGCTT TACTCTGGTC ATTGCTATCG GTTTTCTGGT GGCGGTATTT GGCCGTATCC AGTTAGATAA ACTCGGGGAA AATATCCAGC TGCTGTCGCA GGTTCGCATT ACCAACCTCA TCATGATGCA GGAGTTTAAA GACAACATAA ACACCAATGC CATCGCCATC AGAAACTTGA CGATGCAGGA AGACAGTCGG CAGATGCAGC AAGAGAAAGT GCGTATCGAG GAGATGGTCT CCCGCAATAA CGCGTTACTC ACCAAAATAC ACGACAGCGC CACCGAGAAA CATGCTCAGG AATTGGTCGC GGAACTGGAG CGCGTGCGCC CGGCTTACAG CAGTAGCTAT ACCAACGCCA TCACATTAGC CATGACGAAT AAAAACAGCG AAGCGCAACA TCTGTTATTA ACAGACGTGC GGGCAAAACA GGAAGCCGTC TTCAAAGCGC TGAATGACAT GGTCAACTGG CAAGAGAAGC TCACGGTCGA CATCGCCGAC CAGTCTTTAA AAAATGCCAC TCACGCGGGC ACGCTGATGG TCATCATCGC CCTGCTTTCT GTCGTGCTGG GCGCAATGAT TTCATGGTGG ATTACCCGCA CCATTAAACG TCAGCTCGGG GGGGAGCCAG CCTACACGCT GGAAGTGACC CGTCAGGTTG CACAGGGGAA TCTGGCCGTT GCGATTGAAC TGCGCGATGG AGATACCACC AGCGTACTGG CTGCGATGGA GGATATGCGC CAAAACCTGA GTAATCTGGT CGGTCAGGTG CATCAGAGCA GCGAATCGAT CGCCACCGGC GCGACGCAGA TTGCGATGGG CAACACCGAT CTGAGCCAGC GCACGGAAGA ACAGGCTGCA AATCTTCAGG AAACCGCGGC CTCGATGGAA CAAATGAATA CCACGGTGAA GCAGAATGCG GCGACCGTGC GCACCGCAAC AGAGTTAGCC CATTCCGCCA GCACCACAGC GCAAAAAGGC GGCGATGCGG TCAATAACGT TGTGCGTACG ATGGAAGATA TCACCGCCAG TTCGCGTAAG ATCGGCGACA TTATCGGCGT TATCGACAGT ATTGCTTTCC AGACCAACAT TCTGGCGCTC AACGCCGCCG TTGAAGCCGC CAGAGCCGGT GAACAAGGCC GTGGCTTCGC TGTGGTCGCG GGTGAAGTCC GTTCTCTGGC ACAGCGTTCC GCCTCCGCCG CCCGTGAAAT CAAAGACCTG ATTAACGCCA GCGTGGCTAA CGTGGAAATG GGCGAGAAGA TGGTGAACGA CGCGGGCATC ACCATCAAAG ACATTGTCGA AAAATCGCAG CATGTTGCCA ACCTGCTTAG CGAAATCGGC CTGACAACAC ACGAGCAGGA ACAGGGCGTT GCCCAGGTGA ATGATGCAGT GAATCAGCTC GATCAGGTGA CCCAGCAGAA CGCCGCATTG GTTGAAGAAT CGGCCTCCGC CGCCGACAGC CTGAGCCAAC AGGCAAGAAC GCTGCTGGAA TTAATGGGCG TGTTCAAAAT CAGCGGCGTT CAAGCCCAAG CGCCACGCCT GAGCGCACAG GTGAAGCAAC CGACAGCGCC GAGACTGGCT CTGGCAAGCC AATCGGGCAG CACAAGCAGC GATAACTGGG AAACGTTTTA A
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Protein sequence | MNLIKNSSLG KMLGTGFTLV IAIGFLVAVF GRIQLDKLGE NIQLLSQVRI TNLIMMQEFK DNINTNAIAI RNLTMQEDSR QMQQEKVRIE EMVSRNNALL TKIHDSATEK HAQELVAELE RVRPAYSSSY TNAITLAMTN KNSEAQHLLL TDVRAKQEAV FKALNDMVNW QEKLTVDIAD QSLKNATHAG TLMVIIALLS VVLGAMISWW ITRTIKRQLG GEPAYTLEVT RQVAQGNLAV AIELRDGDTT SVLAAMEDMR QNLSNLVGQV HQSSESIATG ATQIAMGNTD LSQRTEEQAA NLQETAASME QMNTTVKQNA ATVRTATELA HSASTTAQKG GDAVNNVVRT MEDITASSRK IGDIIGVIDS IAFQTNILAL NAAVEAARAG EQGRGFAVVA GEVRSLAQRS ASAAREIKDL INASVANVEM GEKMVNDAGI TIKDIVEKSQ HVANLLSEIG LTTHEQEQGV AQVNDAVNQL DQVTQQNAAL VEESASAADS LSQQARTLLE LMGVFKISGV QAQAPRLSAQ VKQPTAPRLA LASQSGSTSS DNWETF
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