More than 300 homologs were found in PanDaTox collection
for query gene Daci_1600 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  100 
 
 
535 aa  1055    Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  60.62 
 
 
589 aa  556  1e-157  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  53.65 
 
 
596 aa  510  1e-143  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  53.01 
 
 
532 aa  485  1e-135  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  53.79 
 
 
579 aa  475  1e-132  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  48.32 
 
 
572 aa  437  1e-121  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  51.01 
 
 
578 aa  418  9.999999999999999e-116  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  51.02 
 
 
580 aa  415  1e-114  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  47.53 
 
 
542 aa  411  1e-113  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  47.79 
 
 
537 aa  396  1e-109  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  48.13 
 
 
608 aa  393  1e-108  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  58.84 
 
 
552 aa  392  1e-108  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  50.38 
 
 
598 aa  392  1e-108  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  55.71 
 
 
583 aa  391  1e-107  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  47.34 
 
 
511 aa  390  1e-107  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  65.88 
 
 
527 aa  392  1e-107  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  49.52 
 
 
592 aa  390  1e-107  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  45.58 
 
 
579 aa  385  1e-106  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  68.04 
 
 
589 aa  382  1e-105  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  66.26 
 
 
586 aa  381  1e-104  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  48.35 
 
 
615 aa  381  1e-104  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  70.59 
 
 
471 aa  380  1e-104  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  48.35 
 
 
615 aa  381  1e-104  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  69.4 
 
 
537 aa  380  1e-104  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  44.38 
 
 
554 aa  372  1e-102  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  46.53 
 
 
573 aa  371  1e-101  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  61.81 
 
 
532 aa  369  1e-101  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  45.31 
 
 
557 aa  370  1e-101  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  45.74 
 
 
584 aa  365  1e-100  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  62.69 
 
 
578 aa  363  3e-99  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  44.91 
 
 
522 aa  363  4e-99  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  44.91 
 
 
522 aa  363  4e-99  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  44.06 
 
 
553 aa  361  2e-98  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  66.34 
 
 
659 aa  358  9.999999999999999e-98  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  44.15 
 
 
570 aa  357  1.9999999999999998e-97  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_003296  RSp0303  methyl-accepting chemotaxis transmembrane protein  46.64 
 
 
515 aa  356  5e-97  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0248188 
 
 
-
 
NC_012856  Rpic12D_1408  methyl-accepting chemotaxis sensory transducer  45.3 
 
 
513 aa  355  1e-96  Ralstonia pickettii 12D  Bacteria  normal  0.0312904  normal  0.0311205 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  45.01 
 
 
569 aa  355  1e-96  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4877  methyl-accepting chemotaxis sensory transducer  67.19 
 
 
614 aa  354  2.9999999999999997e-96  Delftia acidovorans SPH-1  Bacteria  normal  0.296639  normal 
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  45.75 
 
 
588 aa  353  4e-96  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  46.32 
 
 
559 aa  349  6e-95  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  65.26 
 
 
642 aa  349  8e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  55.73 
 
 
589 aa  348  2e-94  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_007951  Bxe_A2002  methyl-accepting chemotaxis sensory transducer  45.53 
 
 
601 aa  347  4e-94  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  62.39 
 
 
650 aa  343  5.999999999999999e-93  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_003295  RSc1460  methyl-accepting chemotaxis transducer transmembrane protein  44.68 
 
 
513 aa  342  1e-92  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.75608 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  44.6 
 
 
600 aa  341  2e-92  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2537  methyl-accepting chemotaxis sensory transducer  43.17 
 
 
508 aa  341  2e-92  Pectobacterium wasabiae WPP163  Bacteria  normal  0.616273  n/a   
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  61.95 
 
 
653 aa  340  2.9999999999999998e-92  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  45.78 
 
 
608 aa  341  2.9999999999999998e-92  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_007974  Rmet_3678  methyl-accepting chemotaxis sensory transducer  44.17 
 
 
605 aa  340  2.9999999999999998e-92  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.12372 
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  45.78 
 
 
608 aa  341  2.9999999999999998e-92  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  64.29 
 
 
515 aa  340  4e-92  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  61.95 
 
 
653 aa  340  4e-92  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  40.89 
 
 
567 aa  339  8e-92  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  59.81 
 
 
559 aa  339  9e-92  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  59.82 
 
 
536 aa  337  1.9999999999999998e-91  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_007951  Bxe_A2023  methyl-accepting chemotaxis sensory transducer  40.88 
 
 
538 aa  337  3.9999999999999995e-91  Burkholderia xenovorans LB400  Bacteria  normal  0.205381  normal 
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  61.61 
 
 
622 aa  337  3.9999999999999995e-91  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  58.91 
 
 
584 aa  335  9e-91  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  45.04 
 
 
586 aa  335  1e-90  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  44.7 
 
 
513 aa  335  1e-90  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3723  methyl-accepting chemotaxis sensory transducer  44.39 
 
 
539 aa  335  2e-90  Dickeya zeae Ech1591  Bacteria  normal  0.359916  n/a   
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  60.37 
 
 
680 aa  333  4e-90  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_012917  PC1_3464  methyl-accepting chemotaxis sensory transducer  43.04 
 
 
551 aa  332  1e-89  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  49.78 
 
 
577 aa  332  1e-89  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_010622  Bphy_1232  methyl-accepting chemotaxis sensory transducer  45.47 
 
 
595 aa  330  4e-89  Burkholderia phymatum STM815  Bacteria  normal  0.0384777  normal  0.175298 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  58.01 
 
 
584 aa  329  7e-89  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_012917  PC1_2223  methyl-accepting chemotaxis sensory transducer  42.59 
 
 
508 aa  329  8e-89  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0620  methyl-accepting chemotaxis sensory transducer  43.87 
 
 
549 aa  328  1.0000000000000001e-88  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0437284 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  56.76 
 
 
587 aa  328  1.0000000000000001e-88  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_007951  Bxe_A4080  methyl-accepting chemotaxis sensory transducer  44.66 
 
 
549 aa  328  1.0000000000000001e-88  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  43.05 
 
 
549 aa  328  1.0000000000000001e-88  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  42.16 
 
 
543 aa  328  2.0000000000000001e-88  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  41.86 
 
 
554 aa  327  2.0000000000000001e-88  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_013421  Pecwa_4354  methyl-accepting chemotaxis sensory transducer  40.87 
 
 
555 aa  328  2.0000000000000001e-88  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS03153  putative methyl-accepting chemotaxis transducer transmembrane protein  45.95 
 
 
524 aa  327  3e-88  Ralstonia solanacearum GMI1000  Bacteria  normal  0.471775  normal  0.0817308 
 
 
-
 
NC_010002  Daci_3084  methyl-accepting chemotaxis sensory transducer  53.15 
 
 
719 aa  327  3e-88  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  46.39 
 
 
548 aa  327  3e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_4071  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
553 aa  327  4.0000000000000003e-88  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0772  methyl-accepting chemotaxis sensory transducer  61.99 
 
 
612 aa  327  4.0000000000000003e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  0.343543  normal  0.663369 
 
 
-
 
NC_010002  Daci_0742  methyl-accepting chemotaxis sensory transducer  45.09 
 
 
581 aa  327  4.0000000000000003e-88  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  60.06 
 
 
539 aa  326  6e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  57.55 
 
 
618 aa  326  7e-88  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_010681  Bphyt_2245  methyl-accepting chemotaxis sensory transducer  41.17 
 
 
524 aa  325  9e-88  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  42.94 
 
 
573 aa  325  1e-87  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  49.75 
 
 
566 aa  325  1e-87  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_010002  Daci_0172  methyl-accepting chemotaxis sensory transducer  55.75 
 
 
550 aa  324  2e-87  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  58.1 
 
 
585 aa  325  2e-87  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_008752  Aave_3444  methyl-accepting chemotaxis sensory transducer  44.3 
 
 
517 aa  325  2e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  0.679068  normal  0.0634638 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  43.09 
 
 
575 aa  325  2e-87  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_013421  Pecwa_3618  methyl-accepting chemotaxis sensory transducer  43.04 
 
 
551 aa  324  3e-87  Pectobacterium wasabiae WPP163  Bacteria  normal  0.453306  n/a   
 
 
-
 
NC_012880  Dd703_1569  methyl-accepting chemotaxis sensory transducer  39.46 
 
 
554 aa  324  3e-87  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0335  methyl-accepting chemotaxis protein I  52.49 
 
 
394 aa  323  4e-87  Methylibium petroleiphilum PM1  Bacteria  normal  0.809135  normal  0.684623 
 
 
-
 
NC_010682  Rpic_2095  methyl-accepting chemotaxis sensory transducer  57.67 
 
 
520 aa  323  5e-87  Ralstonia pickettii 12J  Bacteria  normal  0.649492  normal  0.265934 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  56.83 
 
 
589 aa  323  5e-87  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_008786  Veis_0400  methyl-accepting chemotaxis sensory transducer  53.33 
 
 
602 aa  323  5e-87  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_007434  BURPS1710b_0074  methyl-accepting chemotaxis protein I  41.81 
 
 
673 aa  323  6e-87  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  59.01 
 
 
585 aa  323  6e-87  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_009074  BURPS668_3853  methyl-accepting chemotaxis protein II  41.81 
 
 
671 aa  322  9.000000000000001e-87  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
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