Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3084 |
Symbol | |
ID | 5748668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3400521 |
End bp | 3402680 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641298187 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001564107 |
Protein GI | 160898525 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACATCG GTCAACGTTT CTGGCGCCGC CAAGGATTGG GCGCAAAGCT GTCACTCACC AATTTTGTCT GGGTCGCCGC CATCCTGGCG CTGCTGGTGC TGGGCATTGC CTGGGATGTG AGCAAGTCCC TGCAGAAAAA AATGCACAAC GAGATGCAGC AGGGCGTCCA GATGCTGCAC AACTTCGTCG AGTCCACCGA CAAGGAGCTG CGCCAGCGCA CCCAGTTCCT GGCCGACAGC CTGGCGCGCA GCCTGCAGGG AACGCTCAGC CTGGACACCA GCGGCCATGA ACCCGTGCTG AGCCTGGACG GCCAGCCGCT CAACGGCAAC GATGCGCACC TGCAGGCCTT CACGCGCAGC ACCGGCGCCG TGGCCACCGT GTTTGCGGCC CAGGGGCAGG GCGACTTCGT GCGTATTGCC ACCACGCTCA AAAACGAGAA AGGCGACCAG AGCGTGGCCG TGCTGGGCAG CCGGCTGGAC CGCGCCCATC CCGCCTACGC CGCCATCCAG GCCGGCCAAA GCTACATGGG CCTGGCCCAC CTGTTCGGCC GCCAGTACAT GACGCAGTAC CGCCCGCTCA AGGACGCTTC CGGCGCCACC GTGGGCATCG CCTTCGTGGG CCAGGACTTC TCGCAACTGC TGGAGCACTT CAAGGACTCC ATCCGCGCGC TCAAGGTGGG CCAGACCGGC TACTACTACG TGCTCAATGC CGAAGACGGC CCCCAGCGCG GCCAACTGGT CGTGCATCCC GCCCTGGAAG GCCAGAACAT GAGCGATTCC AAGGACGGCG ATGGCCGCTT CTTCATCCGC GACATGCTGG ACCGCAAGCA GGGCAGCATG GCCTATCCCT GGACCAATCC GGGCGAAACC CAGGCACGCG ACAAGCTGGT CGTCTTCAGC CAATACGCAC CCTGGAACTG GGTCATTGCC ACCAGCGCCT ACGTGGACGA AGCCGTGTCC GAGACCCGCA GCCTGATCCT GCAGTTCGCC CTCATGGGCC TGGGCGCCGT GCTGCTGCTG TCGGCGGCAT GGTTCTGGCT CATCCGCCGC ATGATCGTGC GCCCCCTGAA GCAGGCCAGC CACATGGCCT ACGCCATTGC CGATGGCGAC CTGACCGTGC GCATCGCCAG CGACCGCCAG GATGAAATCG GCCACTTGCT GGAAGCCATG AACACCACCA GCACGGGCCT GACGCGCGTG GTCGGCAGCG TGAACGAACA GGCCCACAGC GTGGCCCTGG CCAGCGCGGA AATCGCCCAG GGCAACCAGG ACCTGGCCGC CCGCACCGAA AGCGAAGCCA GCGCGCTGGA GCAGACCGCC GCCGCCATGG AAGAGCTGGG CTCCACCGTG GCCCACAACG CAGACCACGC GCAATCGGCC GACCGCATCA CGCGCGAGGC CCAGCGCGTC GTCACCGAAG GCGGGCAGGC CGTGCGCAAG GTCGTGCAGA CCATGCAGGG CATAGACGCC AGCAGCAAGA AGATCGCCGA CATCATCGGC GTCATCGACT CCATTGCCTT CCAGACCAAT ATCCTGGCCC TCAACGCCGC CGTGGAAGCG GCCCGCGCGG GCGAGCATGG CCGGGGCTTT GCCGTGGTCG CCGAGGAAGT GCGCGCCCTT GCAGGCCGCA GCGCCGAGGC CGCCAAGGAA ATCAAGCAGC TCATCAGCCA CAGCGTGGCC GAAATCCACA CCGGCAACCA GGAGGCCGCG TTTGCCGGGG AAACCATGGA ACAGGCCATG GAGGAAATCC GCAAGGTCAC CCAGCTCATC TCGGACATCA GCCACGCCAG CGCTGAGCAG AACAGCGGCG TCGCCCAGGT GGCCGAGGCC ATCACCCACA TCGACCAGAC CACGCAGAAG AACGCCGCCC TGGTCGAGGA AATGGCAGGC GCCGCCGCCG GCCTGCGCCA CCAGTCCGAT CAACTGGTGC GCGTGGTCTC GGTCTTCAGG CTGCCGGGTG GCAGCGGTGC GCCGCTGCAG ACTGCGGCCC GCGCAGCGAG CGCCACGCCA ACCACCGGCG CCGCAATCCC CCGTGCCCCG GCACTGGCGC CCGGCGCTGC CGCGGCCAAG CCCGCAGCCC CTGCAGCCCC GGCAAAAACG GCCGCCGCCA AGCCCGTCGC CATGGCCTGC ACGGCCGATG ACGACTGGGA CAGTTTCTGA
|
Protein sequence | MHIGQRFWRR QGLGAKLSLT NFVWVAAILA LLVLGIAWDV SKSLQKKMHN EMQQGVQMLH NFVESTDKEL RQRTQFLADS LARSLQGTLS LDTSGHEPVL SLDGQPLNGN DAHLQAFTRS TGAVATVFAA QGQGDFVRIA TTLKNEKGDQ SVAVLGSRLD RAHPAYAAIQ AGQSYMGLAH LFGRQYMTQY RPLKDASGAT VGIAFVGQDF SQLLEHFKDS IRALKVGQTG YYYVLNAEDG PQRGQLVVHP ALEGQNMSDS KDGDGRFFIR DMLDRKQGSM AYPWTNPGET QARDKLVVFS QYAPWNWVIA TSAYVDEAVS ETRSLILQFA LMGLGAVLLL SAAWFWLIRR MIVRPLKQAS HMAYAIADGD LTVRIASDRQ DEIGHLLEAM NTTSTGLTRV VGSVNEQAHS VALASAEIAQ GNQDLAARTE SEASALEQTA AAMEELGSTV AHNADHAQSA DRITREAQRV VTEGGQAVRK VVQTMQGIDA SSKKIADIIG VIDSIAFQTN ILALNAAVEA ARAGEHGRGF AVVAEEVRAL AGRSAEAAKE IKQLISHSVA EIHTGNQEAA FAGETMEQAM EEIRKVTQLI SDISHASAEQ NSGVAQVAEA ITHIDQTTQK NAALVEEMAG AAAGLRHQSD QLVRVVSVFR LPGGSGAPLQ TAARAASATP TTGAAIPRAP ALAPGAAAAK PAAPAAPAKT AAAKPVAMAC TADDDWDSF
|
| |