Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0400 |
Symbol | |
ID | 4692277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 451046 |
End bp | 452854 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639848181 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_995206 |
Protein GI | 121607399 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0817302 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACAC GCTTTCGAAT GGCCCACAAA CTGTGGCTGG CGGTGGTTTC GACCGTGGTC TTGCTGCTGA TCGTGCTGGG TTTTTCCGGC TATCGCCTGG ACCGGGCGCA GGCCCGGGCC GACGCCATGG CCAGTGACAT GGCCAGCCGT GTGCAGGCGG CGATGCGCTG GGCCGGCCTG GTCGAAGTCA ATGCCGCACG GACACAGATC CTGAGCGTCA TCTCCGATCC GCAGGCCGAG GCGCAATTCA AGGATGTGAT GCTCGCCACT TCGGCGCAGA TCGGCGCGGT GCAAAAGTCG CTGGAGGCCA TGGCGCTGAC CGATGCCGAC AAGGCGCAGA TGGCCCAACT GGCGCAACTG CGCCAGACGG CGGTCGATCT GCGCGACCAG GCCCTGCAAC TCAAAAGTGC GGACCAGCAA GAGCCGGCGC GGGCCGTGCT CCAAAAGTCC TACAACCCCG CCGTGGCCAT TTATCTGCAG GGGTTGCAGG ATTTCGTGCG GCAGCAGCAA CGAAACGCGC AACAGAGCCA GCAGGAGATG GACGATGCGC ACGCGCTGAT CATGCAGATC AGCGCCGTCA CGGCGGGCCT GCTGATCCTG CTCATCATCG TCGGCGCCCA TTACCTGATC GGCAGCATGC AGCGCCCGCT GGCGCAGGCC AACGCGCTGG TCGAACGCAT GGCGGGCGGC GACCTGAGCA TGCAAGAGCC GGTGACGCGC GGCGATGAGT TCGGCGACCT GCTGCGCTCG CTCTACACGA TGGGCAACGC CTTGGGGCGC ATGGTGCACC AGGTGCGGCT GAGCACCGAC AGCATTGCGC TGGCCAGCGC CGAGATCGCC ACCGGCAACC AGGACCTGTC GGCCCGCACC GAGCAGACCT CCAGCAACCT GCAGCAGACG GCGGCTGCGA TGGAGCAATT TACCAGCACC ATCGCGCAAA GCGCAGGCAG CGCCCAGCAG GCCAGCAGCC TGGCCGCCGG GGCCACGGGC GTTGCGCGCA AGGGCGGCGA GGTGGTCACG CAGGTGGTGT CCACGATGGA GGACATCAAC CACAGCAGCA AGAAGATTGC CGACATCATC GGCGTGATCG ACGGCATTGC GTTCCAGACC AACATCCTGG CGCTCAATGC AGCCGTGGAA GCAGCCCGCG CCGGCGAGCA GGGCCGTGGA TTTGCCGTGG TGGCGTCTGA AGTGCGCAAC CTGGCGCAGC GCAGCGCCGA GGCCGCCAAA GAGATCAAGC AACTGATCAT CGCCTCGGTG GAAAAGGTCG AGGCCGGTTC CCGGCTGGTA TCGAACGCCG GGAGCACGAT GGCCGACATC GTGCAGTCGG TGCAGCATGT GACCGACATG ATCGGCGCAA TCACGGCCGC GTCTTCCGAG CAAAGCGTGG GCGTGTCCCA AGTCAACAAG GCCATCAGCA ACCTCGACCA GATGACACAG CAAAATGCAG CGCTGGTGGA ACAAAGCGCC GCCGCAGCGC AAAGCCTGCG CGAGCAGGCC GACCACCTTG CGCGGGAGGT GTCGATATTC AAGGTGAATG CCGCAGACTA CGCCAGCCAT GGCCCCGCGC AAGCCGCAAT GGCGCAAGCC GCGATGACGA CAGCACGCAC GAGTGCGGGC GCGGCCATGC CAGCCGCCTC TGCCCGGCCC GCCAAACCCG CAGCAGGCGC GCGCACCCAG GCGGCCCCCC GCCTGGGTGC TGGCGCAGCA CCCACCCCGG CGGGCGCACC GGCCCTGCCG GGCAAGGCCG GCGGCAAAAA ACCGGCCATG GCCAAGCAAG ACCCCGAAGA GGAGTGGGAG TCGTTCTGA
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Protein sequence | MPTRFRMAHK LWLAVVSTVV LLLIVLGFSG YRLDRAQARA DAMASDMASR VQAAMRWAGL VEVNAARTQI LSVISDPQAE AQFKDVMLAT SAQIGAVQKS LEAMALTDAD KAQMAQLAQL RQTAVDLRDQ ALQLKSADQQ EPARAVLQKS YNPAVAIYLQ GLQDFVRQQQ RNAQQSQQEM DDAHALIMQI SAVTAGLLIL LIIVGAHYLI GSMQRPLAQA NALVERMAGG DLSMQEPVTR GDEFGDLLRS LYTMGNALGR MVHQVRLSTD SIALASAEIA TGNQDLSART EQTSSNLQQT AAAMEQFTST IAQSAGSAQQ ASSLAAGATG VARKGGEVVT QVVSTMEDIN HSSKKIADII GVIDGIAFQT NILALNAAVE AARAGEQGRG FAVVASEVRN LAQRSAEAAK EIKQLIIASV EKVEAGSRLV SNAGSTMADI VQSVQHVTDM IGAITAASSE QSVGVSQVNK AISNLDQMTQ QNAALVEQSA AAAQSLREQA DHLAREVSIF KVNAADYASH GPAQAAMAQA AMTTARTSAG AAMPAASARP AKPAAGARTQ AAPRLGAGAA PTPAGAPALP GKAGGKKPAM AKQDPEEEWE SF
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