Gene Veis_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0400 
Symbol 
ID4692277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp451046 
End bp452854 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content67% 
IMG OID639848181 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_995206 
Protein GI121607399 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0817302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACAC GCTTTCGAAT GGCCCACAAA CTGTGGCTGG CGGTGGTTTC GACCGTGGTC 
TTGCTGCTGA TCGTGCTGGG TTTTTCCGGC TATCGCCTGG ACCGGGCGCA GGCCCGGGCC
GACGCCATGG CCAGTGACAT GGCCAGCCGT GTGCAGGCGG CGATGCGCTG GGCCGGCCTG
GTCGAAGTCA ATGCCGCACG GACACAGATC CTGAGCGTCA TCTCCGATCC GCAGGCCGAG
GCGCAATTCA AGGATGTGAT GCTCGCCACT TCGGCGCAGA TCGGCGCGGT GCAAAAGTCG
CTGGAGGCCA TGGCGCTGAC CGATGCCGAC AAGGCGCAGA TGGCCCAACT GGCGCAACTG
CGCCAGACGG CGGTCGATCT GCGCGACCAG GCCCTGCAAC TCAAAAGTGC GGACCAGCAA
GAGCCGGCGC GGGCCGTGCT CCAAAAGTCC TACAACCCCG CCGTGGCCAT TTATCTGCAG
GGGTTGCAGG ATTTCGTGCG GCAGCAGCAA CGAAACGCGC AACAGAGCCA GCAGGAGATG
GACGATGCGC ACGCGCTGAT CATGCAGATC AGCGCCGTCA CGGCGGGCCT GCTGATCCTG
CTCATCATCG TCGGCGCCCA TTACCTGATC GGCAGCATGC AGCGCCCGCT GGCGCAGGCC
AACGCGCTGG TCGAACGCAT GGCGGGCGGC GACCTGAGCA TGCAAGAGCC GGTGACGCGC
GGCGATGAGT TCGGCGACCT GCTGCGCTCG CTCTACACGA TGGGCAACGC CTTGGGGCGC
ATGGTGCACC AGGTGCGGCT GAGCACCGAC AGCATTGCGC TGGCCAGCGC CGAGATCGCC
ACCGGCAACC AGGACCTGTC GGCCCGCACC GAGCAGACCT CCAGCAACCT GCAGCAGACG
GCGGCTGCGA TGGAGCAATT TACCAGCACC ATCGCGCAAA GCGCAGGCAG CGCCCAGCAG
GCCAGCAGCC TGGCCGCCGG GGCCACGGGC GTTGCGCGCA AGGGCGGCGA GGTGGTCACG
CAGGTGGTGT CCACGATGGA GGACATCAAC CACAGCAGCA AGAAGATTGC CGACATCATC
GGCGTGATCG ACGGCATTGC GTTCCAGACC AACATCCTGG CGCTCAATGC AGCCGTGGAA
GCAGCCCGCG CCGGCGAGCA GGGCCGTGGA TTTGCCGTGG TGGCGTCTGA AGTGCGCAAC
CTGGCGCAGC GCAGCGCCGA GGCCGCCAAA GAGATCAAGC AACTGATCAT CGCCTCGGTG
GAAAAGGTCG AGGCCGGTTC CCGGCTGGTA TCGAACGCCG GGAGCACGAT GGCCGACATC
GTGCAGTCGG TGCAGCATGT GACCGACATG ATCGGCGCAA TCACGGCCGC GTCTTCCGAG
CAAAGCGTGG GCGTGTCCCA AGTCAACAAG GCCATCAGCA ACCTCGACCA GATGACACAG
CAAAATGCAG CGCTGGTGGA ACAAAGCGCC GCCGCAGCGC AAAGCCTGCG CGAGCAGGCC
GACCACCTTG CGCGGGAGGT GTCGATATTC AAGGTGAATG CCGCAGACTA CGCCAGCCAT
GGCCCCGCGC AAGCCGCAAT GGCGCAAGCC GCGATGACGA CAGCACGCAC GAGTGCGGGC
GCGGCCATGC CAGCCGCCTC TGCCCGGCCC GCCAAACCCG CAGCAGGCGC GCGCACCCAG
GCGGCCCCCC GCCTGGGTGC TGGCGCAGCA CCCACCCCGG CGGGCGCACC GGCCCTGCCG
GGCAAGGCCG GCGGCAAAAA ACCGGCCATG GCCAAGCAAG ACCCCGAAGA GGAGTGGGAG
TCGTTCTGA
 
Protein sequence
MPTRFRMAHK LWLAVVSTVV LLLIVLGFSG YRLDRAQARA DAMASDMASR VQAAMRWAGL 
VEVNAARTQI LSVISDPQAE AQFKDVMLAT SAQIGAVQKS LEAMALTDAD KAQMAQLAQL
RQTAVDLRDQ ALQLKSADQQ EPARAVLQKS YNPAVAIYLQ GLQDFVRQQQ RNAQQSQQEM
DDAHALIMQI SAVTAGLLIL LIIVGAHYLI GSMQRPLAQA NALVERMAGG DLSMQEPVTR
GDEFGDLLRS LYTMGNALGR MVHQVRLSTD SIALASAEIA TGNQDLSART EQTSSNLQQT
AAAMEQFTST IAQSAGSAQQ ASSLAAGATG VARKGGEVVT QVVSTMEDIN HSSKKIADII
GVIDGIAFQT NILALNAAVE AARAGEQGRG FAVVASEVRN LAQRSAEAAK EIKQLIIASV
EKVEAGSRLV SNAGSTMADI VQSVQHVTDM IGAITAASSE QSVGVSQVNK AISNLDQMTQ
QNAALVEQSA AAAQSLREQA DHLAREVSIF KVNAADYASH GPAQAAMAQA AMTTARTSAG
AAMPAASARP AKPAAGARTQ AAPRLGAGAA PTPAGAPALP GKAGGKKPAM AKQDPEEEWE
SF