Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2537 |
Symbol | |
ID | 8530938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 2764342 |
End bp | 2765868 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_003259904 |
Protein GI | 261821798 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.616273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCATCA AACTTAAATT AATTTCGGTT ATGTTGTTAA TGGCATTATT GCTTTTGGCT GTCTCTGCTA CCGGCTTGTT TGGCATGAAT AATACCAATC AATCTATGAA AACGCTGTAT CAGGATCGAC TGATCGCGCT GGGCTATTTG GATAATATCA CCAGGCAGGT GAACAACGTG ATGTTTGAAA TTGCCAGCGT TGATCTCTCG CAGCCAAACA ACGTCAGAGT AGGACTGGCG CACATCGCAG AAGCACAAAA AATTTATGAT GCGCAATGGG ACTTATACAG CAAAACCTAT TTAACCGGCG AAGAAAAAAC CTTAGAAGAA CAGTTTGCCG TTTTATATAA AAAATACAAT GAAAAAGCCG TTATTCCTGC AATTAATGCA ATACAGAAAA ATGACACTGA CGCATTAGAA TATATTATCA ATCACACATT AAAAAGCGAA TATGAACCCC TGCAAAAAAT TGCCGACCAA CTGATTAAAT TACAATCTGA TGTTGGCCAA GAACTCTATT CCGAATCACA AAGCAGTTTC AATAATATAT TATCTTCCGT AGTGATTATC CTTCTGGCGG GAATCGTTAT CGTTGCGTTA TCAGGTTGGC GCTTGATTAT GTCGATTGCC GTGCCGATAA AAAATGCCGT GGAGTTAGCA AGAAAAGTAG CCAGCGGCGA TCTGACACAC CGCATCGCCA TTACCTCGCG CGATGAAATG GGGCAGTTAC AAACTGCACT GCGAGAAATG GTGCTAAATC TGACCGATAT CGTAGAGCGT GTACACAGTA ACGCCGATAT CATTGCGACC GCATCCAGCC AGATTAGCAG CGGCAATATC GATCTCTCCT CCCGAACCGA GCAGCAGGCC AGCTCACTGG AAGAAACCGC AGCATCAATG GAACAGATGA CATCCTCCGT CAAACAGAAT GCCACCCACG CAGCCCACGC CAGCCAACTG GCGACGACGG CTTCACAGCT CGCTGTCGAC GGGGGAAAGA TGATGGGCGA TGTTACATCG GCGATGCAAA ACATGGTCTC ATCCGCAGAG AAAATCACCA ATATTATCAG CGTGATCGAC GGCATTGCGT TTCAGACCAA TATCCTCGCG TTAAACGCCG CCGTGGAAGC GGCTCGCGCG GGGGAACAGG GACGAGGCTT TGCGGTCGTC GCAGGTGAAG TCCGCACGCT GGCGCAACGC AGTGCAAACG CGGCCAAAGA GATTAAAAAC CTGATCGGGA CGTCCGTCGA ACAGGCGAGC CTTGGCCACA CTATCGTCAT CGACGCGGGC AGTACGATTC AGAGCGTGGT GGAAGACATA AAACGCGTGG CATCACTCGT GACTGAAATT TCCACGGCCA GCAATGAACA AAGTCTGGGC ATTGGGCAGA TTAATACCGC CATTTCACAG ATGGAAACGG TCACGCAGCA AAACGCCGCG CTGGTTAACG AAGCCGCCGC TGCCGCAGGT TCACTGTCAG AGCGGGCGGG TGAACTTAGT CATGCCGTTG CCGCGTTCCG TATCTAA
|
Protein sequence | MSIKLKLISV MLLMALLLLA VSATGLFGMN NTNQSMKTLY QDRLIALGYL DNITRQVNNV MFEIASVDLS QPNNVRVGLA HIAEAQKIYD AQWDLYSKTY LTGEEKTLEE QFAVLYKKYN EKAVIPAINA IQKNDTDALE YIINHTLKSE YEPLQKIADQ LIKLQSDVGQ ELYSESQSSF NNILSSVVII LLAGIVIVAL SGWRLIMSIA VPIKNAVELA RKVASGDLTH RIAITSRDEM GQLQTALREM VLNLTDIVER VHSNADIIAT ASSQISSGNI DLSSRTEQQA SSLEETAASM EQMTSSVKQN ATHAAHASQL ATTASQLAVD GGKMMGDVTS AMQNMVSSAE KITNIISVID GIAFQTNILA LNAAVEAARA GEQGRGFAVV AGEVRTLAQR SANAAKEIKN LIGTSVEQAS LGHTIVIDAG STIQSVVEDI KRVASLVTEI STASNEQSLG IGQINTAISQ METVTQQNAA LVNEAAAAAG SLSERAGELS HAVAAFRI
|
| |