More than 300 homologs were found in PanDaTox collection
for query gene RSp0303 on replicon NC_003296
Organism: Ralstonia solanacearum GMI1000



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003296  RSp0303  methyl-accepting chemotaxis transmembrane protein  100 
 
 
515 aa  1019    Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0248188 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  58.09 
 
 
600 aa  490  1e-137  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  57.89 
 
 
608 aa  476  1e-133  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  57.89 
 
 
608 aa  476  1e-133  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  53.01 
 
 
608 aa  456  1e-127  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  53.61 
 
 
615 aa  452  1.0000000000000001e-126  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  53.61 
 
 
615 aa  452  1.0000000000000001e-126  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1408  methyl-accepting chemotaxis sensory transducer  53.06 
 
 
513 aa  446  1.0000000000000001e-124  Ralstonia pickettii 12D  Bacteria  normal  0.0312904  normal  0.0311205 
 
 
-
 
NC_003295  RSc1460  methyl-accepting chemotaxis transducer transmembrane protein  53.7 
 
 
513 aa  444  1e-123  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.75608 
 
 
-
 
NC_007951  Bxe_A2002  methyl-accepting chemotaxis sensory transducer  53.19 
 
 
601 aa  442  1e-123  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  53.38 
 
 
588 aa  444  1e-123  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  52.8 
 
 
570 aa  435  1e-120  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_007651  BTH_I2470  methyl-accepting chemotaxis protein  53.22 
 
 
616 aa  426  1e-118  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3678  methyl-accepting chemotaxis sensory transducer  54.26 
 
 
605 aa  424  1e-117  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.12372 
 
 
-
 
NC_010508  Bcenmc03_1588  methyl-accepting chemotaxis sensory transducer  52.61 
 
 
588 aa  416  9.999999999999999e-116  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.834305  normal 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  52.33 
 
 
522 aa  417  9.999999999999999e-116  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_010622  Bphy_1232  methyl-accepting chemotaxis sensory transducer  53.49 
 
 
595 aa  415  9.999999999999999e-116  Burkholderia phymatum STM815  Bacteria  normal  0.0384777  normal  0.175298 
 
 
-
 
NC_007951  Bxe_A2023  methyl-accepting chemotaxis sensory transducer  49.13 
 
 
538 aa  417  9.999999999999999e-116  Burkholderia xenovorans LB400  Bacteria  normal  0.205381  normal 
 
 
-
 
NC_010681  Bphyt_2245  methyl-accepting chemotaxis sensory transducer  49.04 
 
 
524 aa  418  9.999999999999999e-116  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  52.33 
 
 
522 aa  417  9.999999999999999e-116  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_010551  BamMC406_1527  methyl-accepting chemotaxis sensory transducer  52.82 
 
 
587 aa  410  1e-113  Burkholderia ambifaria MC40-6  Bacteria  normal  0.512784  normal  0.576949 
 
 
-
 
NC_007434  BURPS1710b_2024  methyl-accepting chemotaxis protein I  53.02 
 
 
634 aa  410  1e-113  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1158  methyl-accepting chemotaxis sensory transducer  51.02 
 
 
519 aa  409  1e-113  Burkholderia sp. 383  Bacteria  normal  normal  0.220586 
 
 
-
 
NC_008061  Bcen_3703  methyl-accepting chemotaxis sensory transducer  50.82 
 
 
519 aa  411  1e-113  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.627885  n/a   
 
 
-
 
NC_009076  BURPS1106A_1872  methyl-accepting chemotaxis protein  53.02 
 
 
626 aa  409  1e-113  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4665  methyl-accepting chemotaxis sensory transducer  50.82 
 
 
519 aa  411  1e-113  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0344145  normal  0.449012 
 
 
-
 
NC_009074  BURPS668_1859  methyl-accepting chemotaxis protein  52.83 
 
 
621 aa  407  1.0000000000000001e-112  Burkholderia pseudomallei 668  Bacteria  normal  0.674726  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  48.26 
 
 
596 aa  407  1.0000000000000001e-112  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5635  methyl-accepting chemotaxis sensory transducer  50.61 
 
 
519 aa  408  1.0000000000000001e-112  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.264146  normal  0.57201 
 
 
-
 
NC_010552  BamMC406_4511  methyl-accepting chemotaxis sensory transducer  50.82 
 
 
519 aa  404  1e-111  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2494  methyl-accepting chemotaxis sensory transducer  49.51 
 
 
514 aa  403  1e-111  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A1358  methyl-accepting chemotaxis protein  50.49 
 
 
518 aa  398  1e-109  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0345  methyl-accepting chemotaxis sensory transducer  48.46 
 
 
547 aa  397  1e-109  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  48.55 
 
 
572 aa  396  1e-109  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007435  BURPS1710b_A2534  methyl-accepting chemotaxis protein  50.49 
 
 
518 aa  398  1e-109  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A4750  methyl-accepting chemotaxis sensory transducer  52.13 
 
 
612 aa  396  1e-109  Burkholderia sp. 383  Bacteria  normal  normal  0.445402 
 
 
-
 
NC_007650  BTH_II1464  methyl-accepting chemotaxis protein  50.98 
 
 
518 aa  398  1e-109  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1280  methyl-accepting chemotaxis protein  50.49 
 
 
518 aa  398  1e-109  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1131  methyl-accepting chemotaxis sensory transducer  51.85 
 
 
588 aa  396  1e-109  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1611  methyl-accepting chemotaxis sensory transducer  51.85 
 
 
588 aa  396  1e-109  Burkholderia cenocepacia HI2424  Bacteria  normal  0.542582  n/a   
 
 
-
 
NC_010676  Bphyt_5735  methyl-accepting chemotaxis sensory transducer  51.84 
 
 
510 aa  394  1e-108  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0480332  normal 
 
 
-
 
NC_003296  RS03153  putative methyl-accepting chemotaxis transducer transmembrane protein  52.72 
 
 
524 aa  394  1e-108  Ralstonia solanacearum GMI1000  Bacteria  normal  0.471775  normal  0.0817308 
 
 
-
 
NC_008391  Bamb_4055  methyl-accepting chemotaxis sensory transducer  50.82 
 
 
519 aa  394  1e-108  Burkholderia ambifaria AMMD  Bacteria  normal  0.242338  normal  0.634618 
 
 
-
 
NC_010681  Bphyt_0620  methyl-accepting chemotaxis sensory transducer  47.52 
 
 
549 aa  392  1e-108  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0437284 
 
 
-
 
NC_007952  Bxe_B2520  methyl-accepting chemotaxis sensory transducer  43.75 
 
 
542 aa  389  1e-107  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.128174 
 
 
-
 
NC_008390  Bamb_1508  methyl-accepting chemotaxis sensory transducer  53.11 
 
 
587 aa  391  1e-107  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  47.02 
 
 
535 aa  386  1e-106  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  49.33 
 
 
617 aa  385  1e-105  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008784  BMASAVP1_0277  methyl-accepting chemotaxis protein  48.42 
 
 
530 aa  379  1e-104  Burkholderia mallei SAVP1  Bacteria  normal  0.121986  n/a   
 
 
-
 
NC_006349  BMAA1298  methyl-accepting chemotaxis protein  48.42 
 
 
530 aa  379  1e-104  Burkholderia mallei ATCC 23344  Bacteria  normal  0.09541  n/a   
 
 
-
 
NC_008835  BMA10229_0548  methyl-accepting chemotaxis protein  48.42 
 
 
530 aa  379  1e-104  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  48.66 
 
 
618 aa  381  1e-104  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_010086  Bmul_4025  methyl-accepting chemotaxis sensory transducer  48.73 
 
 
519 aa  380  1e-104  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.987625  normal 
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  57.21 
 
 
513 aa  382  1e-104  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4080  methyl-accepting chemotaxis sensory transducer  46.53 
 
 
549 aa  376  1e-103  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0167  methyl-accepting chemotaxis sensory transducer  50 
 
 
659 aa  377  1e-103  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.677561 
 
 
-
 
NC_007510  Bcep18194_A3360  methyl-accepting chemotaxis sensory transducer  49.34 
 
 
655 aa  374  1e-102  Burkholderia sp. 383  Bacteria  normal  0.139099  normal 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  47.89 
 
 
579 aa  374  1e-102  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010551  BamMC406_0184  methyl-accepting chemotaxis sensory transducer  49.34 
 
 
648 aa  372  1e-102  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0171  methyl-accepting chemotaxis sensory transducer  49.15 
 
 
648 aa  375  1e-102  Burkholderia ambifaria AMMD  Bacteria  normal  0.451768  n/a   
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  68.04 
 
 
513 aa  371  1e-101  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  66.98 
 
 
551 aa  370  1e-101  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  45.44 
 
 
552 aa  369  1e-101  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  65.91 
 
 
598 aa  369  1e-101  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  47.7 
 
 
562 aa  368  1e-100  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  65.01 
 
 
515 aa  368  1e-100  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  46.3 
 
 
562 aa  368  1e-100  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  47.1 
 
 
566 aa  368  1e-100  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  43.36 
 
 
553 aa  366  1e-100  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0240  methyl-accepting chemotaxis sensory transducer  48.68 
 
 
657 aa  367  1e-100  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0244017  normal 
 
 
-
 
NC_007953  Bxe_C0847  methyl-accepting chemotaxis sensory transducer  46.05 
 
 
516 aa  365  1e-100  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.024141 
 
 
-
 
NC_008060  Bcen_2849  methyl-accepting chemotaxis sensory transducer  48.5 
 
 
659 aa  365  1e-100  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  65.01 
 
 
515 aa  367  1e-100  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_008542  Bcen2424_0258  methyl-accepting chemotaxis sensory transducer  48.5 
 
 
659 aa  365  1e-100  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.00414638  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  64.83 
 
 
585 aa  365  1e-99  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  44.34 
 
 
554 aa  364  2e-99  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  70.38 
 
 
520 aa  363  4e-99  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  43.19 
 
 
532 aa  363  5.0000000000000005e-99  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  62.32 
 
 
515 aa  363  6e-99  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_010625  Bphy_6386  methyl-accepting chemotaxis sensory transducer  47.05 
 
 
542 aa  361  1e-98  Burkholderia phymatum STM815  Bacteria  normal  normal  0.864566 
 
 
-
 
NC_010622  Bphy_2972  methyl-accepting chemotaxis sensory transducer  48.78 
 
 
597 aa  361  2e-98  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00113075 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  67.25 
 
 
585 aa  360  3e-98  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  50.21 
 
 
556 aa  360  5e-98  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  73.14 
 
 
513 aa  359  6e-98  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  60.37 
 
 
583 aa  359  8e-98  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  47.63 
 
 
576 aa  359  8e-98  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  61.11 
 
 
578 aa  358  9e-98  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  46.83 
 
 
575 aa  358  9.999999999999999e-98  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  46.29 
 
 
547 aa  357  1.9999999999999998e-97  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  60.83 
 
 
559 aa  358  1.9999999999999998e-97  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  46.29 
 
 
547 aa  358  1.9999999999999998e-97  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  59.88 
 
 
527 aa  357  1.9999999999999998e-97  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  61.3 
 
 
580 aa  357  1.9999999999999998e-97  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  52.47 
 
 
553 aa  358  1.9999999999999998e-97  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  52.24 
 
 
553 aa  357  2.9999999999999997e-97  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_007347  Reut_A2020  histidine kinase, HAMP region: chemotaxis sensory transducer  47.25 
 
 
521 aa  357  3.9999999999999996e-97  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  63.08 
 
 
569 aa  356  5e-97  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  46.29 
 
 
547 aa  356  5e-97  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  44.66 
 
 
589 aa  355  7.999999999999999e-97  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  52.24 
 
 
553 aa  355  1e-96  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>