Gene SeHA_C3889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3889 
Symbol 
ID6489073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3757944 
End bp3759587 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content55% 
IMG OID642743996 
Productmethyl-accepting chemotaxis protein I 
Protein accessionYP_002047602 
Protein GI194447735 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA TCAAAGTCAT CACCGGCGTT ATCGCGACGC TGGGCATATT TAGCGCCTTA 
TTGCTGGTGA CAGGAATACT GTTTTATTCC GCCGTCAGCA GCGATCGGCT GAATTTCCAG
AATGCGAGCG CACTGAGTTA CCAACAACAG GAACTGGGCG GCAGTTTTCA GACATTGATC
GAAACCCGCG TTACCATTAA CCGCGTGGCG ATACGCATGT TAAAAAATCA GCGCGATCCC
GCCTCGCTGG ACGCCATGAA CACGCTGTTA ACCAACGCTG GCGCGTCGCT CAACGAAGCG
GAAAAACATT TCAACAACTA CGTGAACTCC GAAGCGATCG CGGGAAAAGA TCCGGCGTTG
GATGCCCAGG CCGAAGCCAG CTTTAAGCAG ATGTATGACG TTTTGCAGCA GTCTATCCAC
TATCTTAAAG CCGATAATTA CGCCGCCTAT GGCAACCTTG ACGCGCAAAA AGCGCAGGAT
GACATGGAGC AGGTATATGA CAAGTGGCTC TCTCAAAATG CGCAATTAAT AAAATTAGCC
AGCGATCAGA ATCAGAGCAG TTTTACCCAG ATGCAATGGA CGCTGGGGAT AATTCTACTT
ATCGTACTCA TCGTGCTGGC GTTTATCTGG CTGGGGCTGC AACGCGTTCT ACTCCGCCCG
CTGCAACGGA TTATGGCGCA CATTCAAACT ATCGCCGACG GCGATCTTAC CCATGAGATA
GAGGCCGAAG GACGCAGTGA AATGGGCCAA CTGGCCGCCG GTCTTAAAAC GATGCAGCAG
TCGTTAATCC GTACCGTCAG CGCGGTGCGC GATAACGCAG ACTCTATCTA TACTGGCGCA
GGCGAAATTT CCGCCGGCAG CAGCGACCTC TCTTCCCGTA CCGAACAGCA GGCCTCGGCG
CTGGAGGAGA CCGCCGCCAG CATGGAACAG TTAACCGCCA CGGTACGGCA AAACACCGAT
AACGCACGAC AGGCGACGGG TCTGGCGAAA ACCGCATCAG AAACCGCGCG TAAAGGAGGA
CGCGTGGTGG ATAACGTAGT GAGCACCATG AACGATATCG CCGAAAGCTC GGAAAAAATC
GTGGACATCA CCAGCGTGAT TGACGGTATC GCCTTCCAGA CTAATATCCT GGCGCTGAAC
GCCGCGGTAG AAGCCGCCCG CGCCGGCGAA CAGGGGCGAG GATTCGCGGT TGTGGCCGGA
GAGGTACGCA CGTTGGCCAG CCGTAGCGCG CAGGCCGCCA AAGAGATCAA AGTGCTGATT
GAAAACTCCG TGTCGCGCAT TGATACCGGC TCTACGCAGG TACGCGAAGC GGGAGAAACT
ATGAAAGAGA TCGTTAACGC CGTGACCCGC GTGACCGATA TTATGGGCGA AATCGCCTCT
GCCTCCGATG AGCAAAGCAA AGGCATTGAG CAGGTGGCGC AGGCGGTATC GGAAATGGAC
AGCGTGACGC AGCAAAACGC CTCGCTGGTA GAAGAATCCG CAGCAGCGGC GGCGGCGCTG
GAAGATCAGG CTAACGAACT TCGTCAGGCG GTCGCCGCGT TCCGCATCCA GAAACAGCCT
CGTCGGGAGG CGTCGCCGAC GCCGTTAAGC AAAGGTTTAA CGCCACAGCC CGCCGCAGAA
CAGGCGAACT GGGAAAGCTT CTAA
 
Protein sequence
MKNIKVITGV IATLGIFSAL LLVTGILFYS AVSSDRLNFQ NASALSYQQQ ELGGSFQTLI 
ETRVTINRVA IRMLKNQRDP ASLDAMNTLL TNAGASLNEA EKHFNNYVNS EAIAGKDPAL
DAQAEASFKQ MYDVLQQSIH YLKADNYAAY GNLDAQKAQD DMEQVYDKWL SQNAQLIKLA
SDQNQSSFTQ MQWTLGIILL IVLIVLAFIW LGLQRVLLRP LQRIMAHIQT IADGDLTHEI
EAEGRSEMGQ LAAGLKTMQQ SLIRTVSAVR DNADSIYTGA GEISAGSSDL SSRTEQQASA
LEETAASMEQ LTATVRQNTD NARQATGLAK TASETARKGG RVVDNVVSTM NDIAESSEKI
VDITSVIDGI AFQTNILALN AAVEAARAGE QGRGFAVVAG EVRTLASRSA QAAKEIKVLI
ENSVSRIDTG STQVREAGET MKEIVNAVTR VTDIMGEIAS ASDEQSKGIE QVAQAVSEMD
SVTQQNASLV EESAAAAAAL EDQANELRQA VAAFRIQKQP RREASPTPLS KGLTPQPAAE
QANWESF