| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2983 |
|---|
| Symbol | |
|---|
| ID | 5603728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 3280355 |
|---|
| End bp | 3282025 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640938524 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001479212 |
|---|
| Protein GI | 157371223 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.96835 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAATC GTATGAAGGT GGTCACCAGC CTGTTACTGG TGCTGGTGTT ATTTGGCGCC
TTGCAGCTGG TTTCAGGCGG GCTCTTCTTC TCCTCACTGA AGAATGATAA AGAAAACTTC
ACCGTATTGC AGACCATTCG TCAGCAACAA TCCGAGCTGA ACGAAAGCTG GGTCAACCTG
CTGCAGGCGC GCAACACGCT AAACCGTGCC GGTATCCGCC ACATGATGGA TACCAATAAT
ATTGGCAGCG GTGCTACCGT CGCCGAGCTG CTGGCGCGAG CCAAAAGCAA CCTGGTGGTG
GCGGAACAAC ACTATGCCGC CTATGACAAA ATCCCTCTCA ATGCCCGCCA GGACTTGCAG
TCAGCCGAAA AGCTCAAACA GCAATACGGC ATTCTTCACG GTGCCTTGAC CGAACTGACG
GTGTTACTGG GCGAGGGCAA AATCAACGCC TTCTTTGACC AGCCGACGCA AAGCTATCAG
GACGCCTTCG AAGATATCTA CAACACCTAT CTGGCGCAGA ACGACAAGCT TTACCAGAGC
GCAGTGGAAG ACAGTAACCA CTCCTTCAAC TTCGCTATCT GGACGCTGGC GGTGGTGCTG
TTGACGGTAC TGGCAGTGAT TGTTCTGGTG TGGAGCGGTA TTCATCACAT TCTGGTGCGT
CCGCTGAATC GCATGATCGA ACACATCAAA ATGATTGCCG CCGGCGATTT AACCCAGCCG
ATCGCAGTGA CCAGCCGCAA TGAAATGGGC GTACTGGCCG CCAGCCTCAA GCATATGCAA
AACGAACTGA TCGACACCGT TAGCGGTGTG CGTCAGGGGG CCGACGCTAT TTATAGCGGC
GCATCTGAAA TTGCCGCCGG CAACAACGAC CTCTCTTCAC GTACTGAACA GCAGGCCGCC
TCACTGGAGG AAACCGCTGC CAGCATGGAG CAACTGACCG CTACGGTGAA ACAGAACGCC
GAAAATGCTC GTCAGGCCAG CCAACTGGCG TTGAGCGCCT CCGAAACCGC GCAGAAAGGC
GGCAAGGTAG TGGCCAATGT GGTGCAAACC ATGCATGACA TCGCCGGTAG TTCGCAGAAA
ATTGCCGACA TTACCGGCGT GATCGACGGT ATTGCCTTCC AGACCAACAT CCTGGCATTG
AACGCGGCGG TAGAAGCGGC ACGCGCCGGT GAACAGGGCC GTGGTTTTGC GGTGGTAGCA
GGCGAAGTGC GCAATCTGGC ACAGCGTAGT GCCCAGGCGG CGAAGGAAAT CAAAGGATTG
ATCGAAGACT CCGTCAATCG CGTCGATATG GGCTCGGTAC TGGTAGAAAG CGCCGGTGAA
ACCATGGGCG ACATCGTCAA TGCCGTCACC CGCGTTACCG ACATTATGGG TGAGATTGCC
TCGGCGTCCG ACGAACAAAG CCGTGGTATC GATCAGGTCG GCCAGGCGGT AGCGGAAATG
GACCGCGTAA CCCAGCAGAA CGCCTCGTTG GTGGAAGAGT CCGCGTCTGC GGCGGCGGCG
CTGGAAGAGC AGGCCAGCAT GCTGACCCAG TCCGTGGCGG TATTCCGTCT GAAAGCGGCA
GGCCAGGACG AATTCAAAAT GCCCGTCAGC AGCAAGGCAA CAGTGACCCC GGTACTCAAT
CATAAAAAAA TGAACGCCAG CGATCCGCAG GATAACTGGG AAACGTTCTA A
|
|---|
| Protein sequence | MFNRMKVVTS LLLVLVLFGA LQLVSGGLFF SSLKNDKENF TVLQTIRQQQ SELNESWVNL
LQARNTLNRA GIRHMMDTNN IGSGATVAEL LARAKSNLVV AEQHYAAYDK IPLNARQDLQ
SAEKLKQQYG ILHGALTELT VLLGEGKINA FFDQPTQSYQ DAFEDIYNTY LAQNDKLYQS
AVEDSNHSFN FAIWTLAVVL LTVLAVIVLV WSGIHHILVR PLNRMIEHIK MIAAGDLTQP
IAVTSRNEMG VLAASLKHMQ NELIDTVSGV RQGADAIYSG ASEIAAGNND LSSRTEQQAA
SLEETAASME QLTATVKQNA ENARQASQLA LSASETAQKG GKVVANVVQT MHDIAGSSQK
IADITGVIDG IAFQTNILAL NAAVEAARAG EQGRGFAVVA GEVRNLAQRS AQAAKEIKGL
IEDSVNRVDM GSVLVESAGE TMGDIVNAVT RVTDIMGEIA SASDEQSRGI DQVGQAVAEM
DRVTQQNASL VEESASAAAA LEEQASMLTQ SVAVFRLKAA GQDEFKMPVS SKATVTPVLN
HKKMNASDPQ DNWETF
|
|---|
| |