Gene Bamb_0171 details

Gene Information

• Locus tag: Bamb_0171
• ID: 4308575
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 203222
• End bp: 205168
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 638147950
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_772066
• Protein GI: 115350227
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.451768
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGCATA ACTGGTCGAT CCGCACGACG CTCACGGCGG TCGGACTCAT CCTCGTGGGC 
CTGGCCGCCG CGGTCGGCGG CCTCGGCCTT TACGCGCTCG ATCACGCGAG CCGCTCGCTC 
GACGAGATCG CGCACGTCGA TCTGCCGGCG ATCCATACGC TCGACGACAC GTCGTCGTAC 
CTGCTGCGCG CACGCGTGTC GCTCGACCGC TTCCGCTCGC TGACCGAGGC CGGTAACACG 
GCCGACGCGA GCAAGGTGCT CGAGCGCGCG CAGGAGCTGT ATACGAAGTC GAACCAGAAC 
TGGCAGGCGT TCCAGGCGAC GCCGAAGTTC GGCATCGAGC AGGCGCTCGT CGACGATCTC 
GCCGCGCGCT ACGCGACGAT CGTGAAGGAA GGCGTCGAGC CGGAATTCGC GGCCGCGCGC 
GCGGGCGACA TGGCCGCCTA TCACGCGGTC GCCGACACCA AGATCAGCCC GATGTTCGTC 
GCGTACGACC AGGCGGCCGC GGCCGTGGTC GCGGCGCTGC AGAAGCGCGC GGAAGACCGC 
CAGGCCGCGA CGCAGTCGCG GATCTCGATG ATGATCGGCC TGATCGCGGC CGGCGTCGCG 
ATCGCGTTCG TCGTCGTGAT CGCGATCCGC TTCGCGATGC GCGGGCTGAT CATCAATCCG 
CTGGAAGACG CGATCGCGCA CTTCGAGCGC ATCGCCGGCG GCGACCTCAC GCAGCCGGTG 
AACGTGTCCA GCACCAACGA GATCGGCCGG CTGTTCGGCG GCATCAAGCG GATGCAGGAC 
GCGGTGACGA CGATGGTGCA GGCCGTGCAT CGCGGCACCG AGTCGATCGA CGTCGGCGCG 
CGCGAAATCT CGACCGGCAA CACCGACCTG TCGCAGCGCA CCGAGGAGCA GGCCGCGTCG 
CTGCAGGAAA CCGCGTCGAG CATGGAGCAG CTCACGGGCA CCGTGCGCCA GAACGCGGAG 
AACGCGCGGC AGGCGAGCCA ACTCGCGGTG AACGCGTCCG ACATCGCGAC GCACGGCGGC 
GAAGTCGTCG GCCAGGTCGT GTCGACGATG CAGGACATCG CGGCGAGCTC GGGCAAGGTC 
GTCGACATCA TCGGCACGAT CGAAGGCATC GCGTTCCAGA CCAACATCCT CGCGCTGAAC 
GCGGCGGTCG AGGCCGCGCG CGCCGGCGAG CAGGGCCGCG GCTTCGCGGT GGTCGCGGGC 
GAAGTGCGCT CGCTGGCGCA GCGCAGCGCG AGCGCCGCGA AGGAAATCAA GCAGCTGATC 
GGCGATTCGG CCGAGAGGGT CGAAAGCGGG TCGGCGCTCG TCGCGCGGGC CGGTTCGACG 
ATGGACGAGA TCGTGCAGGC CGTGCGCCGA GTGACCGACA TCATGGGCGA GATCAGCGCC 
GCGTCGGACG AGCAGTCGAC CGGCATCGAG CAGGTCAATC GCGCGGTCGG CCAGATGGAC 
TCGGTCACGC AGCAGAACGC GGCGCTCGTC GAAGAGGCCG CGGCCGCGGC CGCGTCGCTC 
GAGGAGCAGA CGCGCCAGAT GAAGGCGATC GTGTCGAGCT GGCGCGTCAC GGGCGGCATC 
GCGATGGCGC CGGTGCGCGG CGCGGCGCGC CCGGCCGCAC AAACCCAGGC CCCGGCGTCG 
CCGTCGGAGA GCCGTCACGA AGCCGCGCCG GTGGCGCACG CACCGCAGGC AGCGCAACCG 
GCCGCCCAGC CGGCCCGCCG CGCGGCGCCC GCGCCGCATG CCGCGGCACC GGCGACGCGC 
AATGCAGCGA AGCCCGCGAC GGATTCCGCC GCACGCGCGT CGAAGGACGC GCCGGCCGCC 
GGCGGCTACG GCCCGCGTCT CGCGAAGGGC GCCGCAGCTT CGCCCAAGCC GGCCGACAAG 
CCCGCGCTGG TGCGTCCGGC GCTGAACGGC GAGAAGCCGG CGCTGGCCGC GGCCGGTGCG 
TCCGACGACG ACTGGGAGAC CTTCTAA 

 

Protein sequence

MLHNWSIRTT LTAVGLILVG LAAAVGGLGL YALDHASRSL DEIAHVDLPA IHTLDDTSSY 
LLRARVSLDR FRSLTEAGNT ADASKVLERA QELYTKSNQN WQAFQATPKF GIEQALVDDL 
AARYATIVKE GVEPEFAAAR AGDMAAYHAV ADTKISPMFV AYDQAAAAVV AALQKRAEDR 
QAATQSRISM MIGLIAAGVA IAFVVVIAIR FAMRGLIINP LEDAIAHFER IAGGDLTQPV 
NVSSTNEIGR LFGGIKRMQD AVTTMVQAVH RGTESIDVGA REISTGNTDL SQRTEEQAAS 
LQETASSMEQ LTGTVRQNAE NARQASQLAV NASDIATHGG EVVGQVVSTM QDIAASSGKV 
VDIIGTIEGI AFQTNILALN AAVEAARAGE QGRGFAVVAG EVRSLAQRSA SAAKEIKQLI 
GDSAERVESG SALVARAGST MDEIVQAVRR VTDIMGEISA ASDEQSTGIE QVNRAVGQMD 
SVTQQNAALV EEAAAAAASL EEQTRQMKAI VSSWRVTGGI AMAPVRGAAR PAAQTQAPAS 
PSESRHEAAP VAHAPQAAQP AAQPARRAAP APHAAAPATR NAAKPATDSA ARASKDAPAA 
GGYGPRLAKG AAASPKPADK PALVRPALNG EKPALAAAGA SDDDWETF