| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1611 |
|---|
| Symbol | |
|---|
| ID | 4448666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1772534 |
|---|
| End bp | 1774300 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639693656 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_835256 |
|---|
| Protein GI | 116689633 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.542582 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTTCA GGAACCTGAC GATTCGTGCG CGCATCGGTT TGACGATGGC GTTTCTGGCG
GTACTGCTGG GTGTCACCGG CGTGCTCGGT CTGTACGGGA TGACGCGTGC GAACGATTCG
ACGCGCGAGA TTTTCACGAA CCAGATGCCG AGCGCGGTCA ACGTGGCGAT GGCGGAAATG
TTCGCCGCGC GCGAGCGCCT CGCACTCGAC CGTGCGGCGC TGCTGGCCGG CACGCCGGAC
TCGGCGGCGG CCATCGAGCG CAGCCGCGCG ATGCGGGCAC AATCGGACGC TTGGTGGCAG
AAATACCTTG CGCTGCCGCG CGACGCCGAC GAGGACCGGC TCGCACAGGA CATCGCCGCC
CGGCGCAAGG TGCTGCAGGA CAGTTGCGAC GCGTTCGCGA GTGCGGTCGG GGCGGGCGAT
CACGACCGGA TCGGCGGCGG AGCGAAGCAG CTTCAGGCGC GCTATACCGA ACTCGCCACG
GCCGGTGAAG CGCTGCGCAG CTTCCAGTTC ACCAATGCGC AGGCGCGCTT CGATCAGGCG
GAATCGGTAT TCGAGACGAT GCGCGTGCTG TCGATCGTGG TGCTGCTGGC CGGCATCGGC
GCCGCGGTGC TGTCGTGGCT GACGCTGAGC CGCGCGATCG GCCGCCCGAT CGCCGACGCG
CTGTCGCATT TCGACGCGAT CGCCGCAGGC GACTTGCGCC GGCCGATCGT CGTCGACCGG
CGCGACGAGA TGGGCCAGAT GCTGGAAGGC CTCGCGAGGA TGCAGCGCGG GCTCGTCGAC
ACGGTGCGCA CCGTGCGCGG CGGTAGCGAG TCGATCGCGA CCGCAGCCCG CCAGATCGCG
GCCGGCAACA CCGACCTGTC GTCGCGCACC GAGGAACAGG CCGCTGCGCT GCAGGAAACC
GCGTCGAGCA TGGAGCAACT GACGGGCACG GTGAAGCAGA ATGCCGACAA TGCGCGCCAG
GCAAGCTCGC TGGCCGCGAA TGCGTCCGAC ATTGCAAACA AGGGCAATAC GGTGGTCGGC
CAGGTGGTCG GCACGATGGG CGAAATCAAC GACAGCTCGG CCAAAATCGC CGACATCATC
GCGATCATCG AGGGAATCGC GTTCCAGACC AACATTCTTG CGCTGAATGC GGCCGTCGAA
GCCGCGCGGG CGGGCGAGGA AGGCCGCGGC TTCGCGGTGG TCGCCGGCGA AGTGCGCAGC
CTCGCGCAGC GTTCGTCGAG CGCGGCGAAG GAAATCAAGG CGCTGATCGA CGCGTCGGTG
GAGCGTATCC GGACGGGCTC GACGCTGGTC GACGAAGCCG GGCGCACGAT GAGCGACGTG
ATCGGCGCGG TCCAGCGCGT GACGGACATC ATGGGCGAGA TCGCGGCGGC CTCCGAGGAG
CAGAGCAGCG GAATCGACCA GGTGGCGCGC GCGGTCGCGC AGATGGACGA GGTCACGCAG
CAGAATGCCG CGCTCGTCGA GGAAGCGGCG GCCGCCGCGC AGTCGCTCGA GGAACAGGCG
GCCCGCCTGC GCGAAACGGC GGCGGTATTC CAGCTCGACG ACGAAGCAGC ACGCGCGGGC
ACCGTCGTTG CGGTGGCGCG TCAAGCGCCG CGTGCACTTT CCGCGCCGGC TGCGGCGCCC
GCAGCACCGG CTGCGGCGCG CGTCGAACGC GACGCCGCGC CGAAACGCGC ACCCGCCGCG
ACGCCGGCGC GCAAGCCCGC CGCCGCATCC GCCGCTCCCG CGCCGGCAGT CGCGACCGCC
GGCGGCGACG ACTGGGAGAC GTTCTGA
|
|---|
| Protein sequence | MVFRNLTIRA RIGLTMAFLA VLLGVTGVLG LYGMTRANDS TREIFTNQMP SAVNVAMAEM
FAARERLALD RAALLAGTPD SAAAIERSRA MRAQSDAWWQ KYLALPRDAD EDRLAQDIAA
RRKVLQDSCD AFASAVGAGD HDRIGGGAKQ LQARYTELAT AGEALRSFQF TNAQARFDQA
ESVFETMRVL SIVVLLAGIG AAVLSWLTLS RAIGRPIADA LSHFDAIAAG DLRRPIVVDR
RDEMGQMLEG LARMQRGLVD TVRTVRGGSE SIATAARQIA AGNTDLSSRT EEQAAALQET
ASSMEQLTGT VKQNADNARQ ASSLAANASD IANKGNTVVG QVVGTMGEIN DSSAKIADII
AIIEGIAFQT NILALNAAVE AARAGEEGRG FAVVAGEVRS LAQRSSSAAK EIKALIDASV
ERIRTGSTLV DEAGRTMSDV IGAVQRVTDI MGEIAAASEE QSSGIDQVAR AVAQMDEVTQ
QNAALVEEAA AAAQSLEEQA ARLRETAAVF QLDDEAARAG TVVAVARQAP RALSAPAAAP
AAPAAARVER DAAPKRAPAA TPARKPAAAS AAPAPAVATA GGDDWETF
|
|---|
| |