Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0536 |
Symbol | |
ID | 6287044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 572030 |
End bp | 573859 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642624101 |
Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
Protein accession | YP_001898123 |
Protein GI | 187927636 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGTCG TAGTAGGAAA CCATACCGTG CTTGCATCCA TCCGTACTCG CATTTTGCTG ACCTGCGTTG CCATCGTGGT CGGCGCATTG ACCTTTGCCG GCGGTCTCAA CTATCTCGTG ACGCGCTCGT ACAACGACGA GTCCATCCGC CAGAACCTGC AGTCCGTCGC GCGGGGCCAC ATCGCTGGCA TCGACGACTG GGTGGCGTCC AAGACGCAGA TGATGGTGTC GCTGCAAGAC GTGGCGGTGT CTGCCGATCC GATTCCGGTC TTCAAGGCCG TGCACAAGGC TGGCGGCTTC ATTAACGTCT ATGTTGGCTA TCCCGACAAG TCGTACAAAT TCTCGAACCC CGAAGGCATT CCGCCGACGT ATGACCCGAC CGCGCGCCCC TGGTACAAGC AGGCGGTGGA GGCGGGCAAG CCTGTGGTGA CGCCGCCGTA CGTGAGCGCC AGCACCGGCC AGCTCGTGGT GACTTTCGCA GTGCCCATTC TGGAAGGCGG CGCGCTCAAG GGCGTGATTG GCGGCGACGT GGCAATGGAC AGCGTGATCG CCAACGTGAA GGCCATCCAT CCGACGCAGG CGAGCTTCGG TTTCCTCGTC AACGCTGCGG GCAAGATCGT TGCGCACCCG AATGACAAAC TCACGCTCAA ACCGGCAACT GAGCTGGCGG CAGGGTTGAA CGAAGCCACA CTGGCATCGC TGGCACAAGC CGAGAGGCCC GTGGAAGTGA CGGTGGATGG GGCGTCCAAG CTGCTCTACC GCCAGGGCGT GAAGGGCACC GACTGGGGCC TGGTGGTGGC GCTGGACAAG TCTGACGCCA CCGCGGGTAT GCGCTCGCTG GTGATGACGT CGATTGGCGC GCTGGTGGGC GTGGCCATCG TTGCAGCACT CATCGTCGGT GCAATGACGG CACGCGCGTT CCGCCGCCTG TCGATGATCC GTGATGCAAT GGACGACATC GGCTCGGGCA GCGGCGACCT CACCAAGCGT CTGCCGTCGG ACGGCGAAGA CGAAGTCGCG CAGATCGCCC GTTCGTTCAA TGCGTTTGCC GACAAGCTCA CGGCGGTGAT GCAGCAGATC CGCCTGGGCA GCGATTCGGT GCGCTCGGCC GCGCAGGAAA TTGCCGCCGG CAACGCAGAC CTGTCGCAGC GCACGGAAGA GCAGGCCAGC TCGCTGGAAG AAACCGCGTC GAGCATGGAA GAACTGACGA GTATCGTGAA GCAGAACGCC GACAACGCGC GTCAGGCCAG CCAGCTTGCC GTCACGGCGT CGGACGTGGC CACGCGCGGC GGCAACGTGG TCGGCCAGGT TGTGCAGACC ATGGGCGGCA TCAACGAGAG CAGCAAGAAG ATTGCCGACA TCATCGGCGT GATCGAAAGC ATCGCCTTCC AGACCAACAT CCTGGCGCTG AACGCGGCGG TGGAAGCCGC GCGTGCCGGC GAGCAGGGCC GCGGCTTTGC CGTGGTGGCC AGCGAAGTGC GCAGCCTGGC GCAGCGTTCG GCCGGTGCGG CCAAGGAAAT CAAGGCGCTG ATCAGCGACT CGGTGGATCG TGTGAGCAAC GGCACGGCGC TGGTGGATCA GGCCGGCGTG ACGATGGCCG AGATCGTGGA TGCAGTGAAG CGCGTGACCG ACATCATGGG CGAGATTTCA TCAGCGTCGG AAGAGCAGAG CAGCGGCATC GAGCAGGTCA ACCAGGCCGT CAACCAGATG GACCAGGTGA CGCAGCAGAA CGCCGCGCTG GTCGAGCAGG CGGCTGCCGC TGCGGAATCG CTGGAGGAAC AGGCCCACAA CCTGAACGAG GCAGTGGGGC AGTTCCGCTT GTCGCACTAA
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Protein sequence | MGVVVGNHTV LASIRTRILL TCVAIVVGAL TFAGGLNYLV TRSYNDESIR QNLQSVARGH IAGIDDWVAS KTQMMVSLQD VAVSADPIPV FKAVHKAGGF INVYVGYPDK SYKFSNPEGI PPTYDPTARP WYKQAVEAGK PVVTPPYVSA STGQLVVTFA VPILEGGALK GVIGGDVAMD SVIANVKAIH PTQASFGFLV NAAGKIVAHP NDKLTLKPAT ELAAGLNEAT LASLAQAERP VEVTVDGASK LLYRQGVKGT DWGLVVALDK SDATAGMRSL VMTSIGALVG VAIVAALIVG AMTARAFRRL SMIRDAMDDI GSGSGDLTKR LPSDGEDEVA QIARSFNAFA DKLTAVMQQI RLGSDSVRSA AQEIAAGNAD LSQRTEEQAS SLEETASSME ELTSIVKQNA DNARQASQLA VTASDVATRG GNVVGQVVQT MGGINESSKK IADIIGVIES IAFQTNILAL NAAVEAARAG EQGRGFAVVA SEVRSLAQRS AGAAKEIKAL ISDSVDRVSN GTALVDQAGV TMAEIVDAVK RVTDIMGEIS SASEEQSSGI EQVNQAVNQM DQVTQQNAAL VEQAAAAAES LEEQAHNLNE AVGQFRLSH
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