More than 300 homologs were found in PanDaTox collection
for query gene Smal_3896 on replicon NC_011071
Organism: Stenotrophomonas maltophilia R551-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  100 
 
 
706 aa  1390    Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  63.32 
 
 
755 aa  620  1e-176  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  67.01 
 
 
740 aa  617  1e-175  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  64.69 
 
 
733 aa  607  9.999999999999999e-173  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  63.25 
 
 
752 aa  608  9.999999999999999e-173  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  64.59 
 
 
753 aa  599  1e-170  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  61 
 
 
843 aa  591  1e-167  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  60.42 
 
 
705 aa  577  1.0000000000000001e-163  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  53.19 
 
 
745 aa  559  1e-158  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_011071  Smal_3007  methyl-accepting chemotaxis sensory transducer  53.97 
 
 
707 aa  478  1e-133  Stenotrophomonas maltophilia R551-3  Bacteria  normal  decreased coverage  0.00177393 
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  71.55 
 
 
793 aa  446  1.0000000000000001e-124  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  43.1 
 
 
797 aa  440  9.999999999999999e-123  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  52.75 
 
 
691 aa  441  9.999999999999999e-123  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  70.96 
 
 
775 aa  431  1e-119  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  45.8 
 
 
792 aa  359  9e-98  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_007298  Daro_0729  PAS  40.38 
 
 
945 aa  352  1e-95  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  60.74 
 
 
701 aa  350  7e-95  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  57.99 
 
 
665 aa  345  2e-93  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  57.99 
 
 
664 aa  345  2e-93  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  57.99 
 
 
664 aa  345  2e-93  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  57.69 
 
 
657 aa  343  5.999999999999999e-93  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  56.25 
 
 
656 aa  341  2.9999999999999998e-92  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  56.25 
 
 
656 aa  341  2.9999999999999998e-92  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  59.71 
 
 
679 aa  340  4e-92  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  55.87 
 
 
657 aa  341  4e-92  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  60.32 
 
 
679 aa  337  5.999999999999999e-91  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  56.4 
 
 
654 aa  332  2e-89  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  51.78 
 
 
678 aa  330  5.0000000000000004e-89  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3633  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.71 
 
 
845 aa  330  6e-89  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.522396 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  63.28 
 
 
586 aa  325  2e-87  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  53.78 
 
 
767 aa  325  2e-87  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5250  methyl-accepting chemotaxis protein, sensory transducer  64.46 
 
 
677 aa  324  4e-87  Cupriavidus metallidurans CH34  Bacteria  normal  0.0837898  normal  0.0130353 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  67.97 
 
 
592 aa  323  7e-87  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  62.24 
 
 
583 aa  322  1.9999999999999998e-86  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007650  BTH_II0158  chemotaxis protein  55.99 
 
 
779 aa  318  3e-85  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  66.92 
 
 
596 aa  318  3e-85  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0206  methyl-accepting chemotaxis protein  56.16 
 
 
793 aa  317  4e-85  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  67.97 
 
 
552 aa  317  5e-85  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  72.16 
 
 
572 aa  317  6e-85  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.49 
 
 
864 aa  317  6e-85  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  68.34 
 
 
598 aa  317  7e-85  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  59.49 
 
 
566 aa  315  1.9999999999999998e-84  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  65.19 
 
 
559 aa  315  1.9999999999999998e-84  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  60.61 
 
 
579 aa  315  1.9999999999999998e-84  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.61 
 
 
1123 aa  315  1.9999999999999998e-84  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  61.37 
 
 
559 aa  315  1.9999999999999998e-84  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  66.8 
 
 
597 aa  313  5.999999999999999e-84  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  60.74 
 
 
589 aa  313  6.999999999999999e-84  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  67.84 
 
 
542 aa  312  2e-83  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  57.23 
 
 
562 aa  312  2e-83  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  61.84 
 
 
573 aa  311  2e-83  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  67.19 
 
 
584 aa  310  5e-83  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  66.93 
 
 
578 aa  310  8e-83  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  65.5 
 
 
541 aa  309  9e-83  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  64.77 
 
 
617 aa  308  2.0000000000000002e-82  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  56.51 
 
 
578 aa  308  2.0000000000000002e-82  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  47.44 
 
 
610 aa  308  2.0000000000000002e-82  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  58.53 
 
 
628 aa  308  2.0000000000000002e-82  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  66.28 
 
 
580 aa  308  2.0000000000000002e-82  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  65.38 
 
 
532 aa  308  3e-82  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  67.94 
 
 
577 aa  308  3e-82  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  63.73 
 
 
566 aa  307  5.0000000000000004e-82  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  69.53 
 
 
559 aa  306  8.000000000000001e-82  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  58.78 
 
 
630 aa  306  1.0000000000000001e-81  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  70.7 
 
 
579 aa  305  1.0000000000000001e-81  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  50.15 
 
 
863 aa  306  1.0000000000000001e-81  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1208  methyl-accepting chemotaxis sensory transducer  57.95 
 
 
555 aa  305  2.0000000000000002e-81  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000392698  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  60 
 
 
557 aa  305  2.0000000000000002e-81  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  60 
 
 
557 aa  305  2.0000000000000002e-81  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  49.86 
 
 
860 aa  305  2.0000000000000002e-81  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  64.21 
 
 
601 aa  305  3.0000000000000004e-81  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  62.41 
 
 
586 aa  304  3.0000000000000004e-81  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  68.36 
 
 
585 aa  304  4.0000000000000003e-81  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  62.36 
 
 
579 aa  304  4.0000000000000003e-81  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  66.27 
 
 
567 aa  304  5.000000000000001e-81  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3123  methyl-accepting chemotaxis sensory transducer  57.62 
 
 
555 aa  303  7.000000000000001e-81  Pectobacterium wasabiae WPP163  Bacteria  decreased coverage  0.000142041  n/a   
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  57.19 
 
 
618 aa  303  7.000000000000001e-81  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  58.59 
 
 
557 aa  303  8.000000000000001e-81  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  65.12 
 
 
515 aa  303  9e-81  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  67.19 
 
 
569 aa  303  9e-81  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2548  methyl-accepting chemotaxis protein  61.26 
 
 
525 aa  302  1e-80  Methylibium petroleiphilum PM1  Bacteria  decreased coverage  0.00975221  normal  0.500866 
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  63.14 
 
 
680 aa  302  1e-80  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  63.76 
 
 
609 aa  302  1e-80  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  63.76 
 
 
608 aa  301  2e-80  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  59.6 
 
 
552 aa  301  3e-80  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  62.24 
 
 
557 aa  301  3e-80  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  64.59 
 
 
537 aa  301  4e-80  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  52.96 
 
 
589 aa  301  4e-80  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_010557  BamMC406_5887  methyl-accepting chemotaxis sensory transducer  66.8 
 
 
519 aa  300  9e-80  Burkholderia ambifaria MC40-6  Bacteria  normal  0.330697  normal 
 
 
-
 
NC_008752  Aave_2284  methyl-accepting chemotaxis sensory transducer  67.19 
 
 
547 aa  300  9e-80  Acidovorax citrulli AAC00-1  Bacteria  normal  0.206976  hitchhiker  0.0000952985 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  59.2 
 
 
598 aa  299  1e-79  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6127  methyl-accepting chemotaxis sensory transducer  66.67 
 
 
519 aa  299  1e-79  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0128017 
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  65.49 
 
 
573 aa  299  1e-79  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_007511  Bcep18194_B0267  methyl-accepting chemotaxis sensory transducer  59.79 
 
 
514 aa  298  2e-79  Burkholderia sp. 383  Bacteria  normal  normal  0.715012 
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  64.44 
 
 
613 aa  298  2e-79  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  57.98 
 
 
659 aa  298  3e-79  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  65.1 
 
 
558 aa  297  5e-79  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4414  methyl-accepting chemotaxis sensory transducer  64.06 
 
 
518 aa  297  5e-79  Delftia acidovorans SPH-1  Bacteria  normal  0.684904  normal 
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  57.89 
 
 
555 aa  296  6e-79  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_012912  Dd1591_0055  methyl-accepting chemotaxis sensory transducer  63.46 
 
 
628 aa  296  7e-79  Dickeya zeae Ech1591  Bacteria  normal  0.608397  n/a   
 
 
-
 
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