More than 300 homologs were found in PanDaTox collection
for query gene Daro_0728 on replicon NC_007298
Organism: Dechloromonas aromatica RCB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  100 
 
 
792 aa  1609    Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_007298  Daro_0729  PAS  59.1 
 
 
945 aa  675    Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  54.53 
 
 
679 aa  544  1e-153  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  54.06 
 
 
793 aa  524  1e-147  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  50 
 
 
767 aa  519  1e-146  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  56.33 
 
 
679 aa  519  1e-146  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  46.19 
 
 
797 aa  510  1e-143  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  53.17 
 
 
664 aa  503  1e-141  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  53.85 
 
 
657 aa  503  1e-141  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  53.3 
 
 
664 aa  504  1e-141  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  52.59 
 
 
657 aa  501  1e-140  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  53.64 
 
 
656 aa  499  1e-140  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  53.64 
 
 
656 aa  502  1e-140  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.66 
 
 
1123 aa  500  1e-140  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  53.1 
 
 
665 aa  501  1e-140  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  51.04 
 
 
860 aa  498  1e-139  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  55.34 
 
 
863 aa  494  9.999999999999999e-139  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  54.05 
 
 
654 aa  494  9.999999999999999e-139  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  40 
 
 
775 aa  483  1e-135  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  54.7 
 
 
864 aa  479  1e-134  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  39.11 
 
 
733 aa  461  9.999999999999999e-129  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  39.21 
 
 
740 aa  456  1e-127  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  40.05 
 
 
753 aa  455  1.0000000000000001e-126  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3112  putative methyl-accepting chemotaxis sensory transducer  42.68 
 
 
1029 aa  453  1.0000000000000001e-126  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  39.01 
 
 
752 aa  452  1e-125  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_007650  BTH_II0158  chemotaxis protein  44.01 
 
 
779 aa  424  1e-117  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  43.19 
 
 
678 aa  423  1e-117  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.88 
 
 
701 aa  417  9.999999999999999e-116  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  41.24 
 
 
705 aa  413  1e-114  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_009075  BURPS668_A0206  methyl-accepting chemotaxis protein  38.76 
 
 
793 aa  414  1e-114  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  56.14 
 
 
755 aa  403  1e-111  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  40.43 
 
 
610 aa  391  1e-107  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  38.44 
 
 
691 aa  388  1e-106  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_011071  Smal_3633  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.12 
 
 
845 aa  383  1e-105  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.522396 
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  39.31 
 
 
745 aa  379  1e-104  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_010524  Lcho_1530  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.11 
 
 
890 aa  380  1e-104  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.155082 
 
 
-
 
NC_007520  Tcr_0553  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.07 
 
 
888 aa  381  1e-104  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  43.69 
 
 
843 aa  376  1e-103  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  59.71 
 
 
706 aa  376  1e-102  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  62.09 
 
 
572 aa  367  1e-100  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  63.43 
 
 
559 aa  360  5e-98  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  55.35 
 
 
592 aa  357  3.9999999999999996e-97  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  60.89 
 
 
559 aa  354  2.9999999999999997e-96  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  58.45 
 
 
569 aa  353  8.999999999999999e-96  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  54.99 
 
 
583 aa  351  3e-95  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  59.33 
 
 
542 aa  350  6e-95  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  61.49 
 
 
579 aa  349  1e-94  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  55.52 
 
 
579 aa  348  3e-94  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  59 
 
 
559 aa  348  3e-94  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  63.35 
 
 
680 aa  347  6e-94  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  55.34 
 
 
586 aa  344  4e-93  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  63.8 
 
 
586 aa  343  5.999999999999999e-93  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  55.49 
 
 
578 aa  343  1e-92  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  54.77 
 
 
598 aa  342  2e-92  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  60.37 
 
 
578 aa  341  2.9999999999999998e-92  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  58.08 
 
 
585 aa  341  2.9999999999999998e-92  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  59.94 
 
 
584 aa  341  2.9999999999999998e-92  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  51.53 
 
 
589 aa  340  8e-92  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  56.85 
 
 
562 aa  339  9.999999999999999e-92  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  65.27 
 
 
566 aa  338  2.9999999999999997e-91  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_007908  Rfer_3286  methyl-accepting chemotaxis sensory transducer  55.85 
 
 
499 aa  337  5e-91  Rhodoferax ferrireducens T118  Bacteria  normal  0.729026  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  63.12 
 
 
577 aa  337  5.999999999999999e-91  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  53.53 
 
 
598 aa  337  5.999999999999999e-91  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  61.95 
 
 
580 aa  337  7e-91  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  56.78 
 
 
579 aa  335  1e-90  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  49.5 
 
 
589 aa  336  1e-90  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  57.45 
 
 
527 aa  334  3e-90  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  57.63 
 
 
549 aa  333  5e-90  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  65.14 
 
 
596 aa  332  2e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  53.59 
 
 
661 aa  332  2e-89  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  61.49 
 
 
552 aa  331  3e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  67.96 
 
 
433 aa  331  3e-89  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  66.44 
 
 
609 aa  330  5.0000000000000004e-89  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  59.87 
 
 
543 aa  330  7e-89  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0335  methyl-accepting chemotaxis protein I  62.29 
 
 
394 aa  330  7e-89  Methylibium petroleiphilum PM1  Bacteria  normal  0.809135  normal  0.684623 
 
 
-
 
NC_010681  Bphyt_0231  methyl-accepting chemotaxis sensory transducer  58.81 
 
 
324 aa  330  7e-89  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  66.78 
 
 
617 aa  330  9e-89  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_007947  Mfla_1934  methyl-accepting chemotaxis sensory transducer  68.07 
 
 
560 aa  329  1.0000000000000001e-88  Methylobacillus flagellatus KT  Bacteria  normal  0.718562  normal 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  51.63 
 
 
567 aa  328  2.0000000000000001e-88  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  54.26 
 
 
557 aa  328  3e-88  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  54.26 
 
 
557 aa  328  3e-88  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  59.03 
 
 
566 aa  328  3e-88  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  65.77 
 
 
608 aa  327  4.0000000000000003e-88  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2145  methyl-accepting chemotaxis protein  57.18 
 
 
781 aa  327  5e-88  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.297887  normal 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  57.7 
 
 
587 aa  327  5e-88  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  62.11 
 
 
557 aa  327  5e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  66.55 
 
 
615 aa  327  6e-88  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  63.03 
 
 
471 aa  327  6e-88  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  66.55 
 
 
615 aa  327  6e-88  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  52.88 
 
 
557 aa  327  6e-88  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  65.76 
 
 
532 aa  326  9e-88  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  65.89 
 
 
653 aa  325  2e-87  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  65.89 
 
 
653 aa  325  2e-87  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  53.65 
 
 
651 aa  325  2e-87  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  62.42 
 
 
584 aa  325  2e-87  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  57.32 
 
 
557 aa  325  3e-87  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  53.91 
 
 
580 aa  325  3e-87  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3007  methyl-accepting chemotaxis sensory transducer  35.17 
 
 
707 aa  324  3e-87  Stenotrophomonas maltophilia R551-3  Bacteria  normal  decreased coverage  0.00177393 
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  60.54 
 
 
597 aa  324  4e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  63.09 
 
 
601 aa  324  5e-87  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
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