More than 300 homologs were found in PanDaTox collection
for query gene Shewmr4_2091 on replicon NC_008321
Organism: Shewanella sp. MR-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004347  SO_2123  methyl-accepting chemotaxis protein  89.02 
 
 
654 aa  1155    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  87.82 
 
 
664 aa  1149    Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  100 
 
 
656 aa  1338    Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  99.7 
 
 
656 aa  1332    Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  99.09 
 
 
657 aa  1295    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  87.67 
 
 
664 aa  1150    Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  88.58 
 
 
657 aa  1161    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  87.54 
 
 
665 aa  1151    Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  48.41 
 
 
767 aa  590  1e-167  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  48.86 
 
 
860 aa  591  1e-167  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.46 
 
 
1123 aa  572  1.0000000000000001e-162  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  48.39 
 
 
863 aa  569  1e-161  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  60.67 
 
 
679 aa  567  1e-160  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.07 
 
 
864 aa  565  1.0000000000000001e-159  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  60.16 
 
 
679 aa  555  1e-157  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0729  PAS  56.42 
 
 
945 aa  511  1e-143  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  53.64 
 
 
792 aa  491  1e-137  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  42.77 
 
 
678 aa  475  1e-132  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  47.83 
 
 
775 aa  469  1.0000000000000001e-131  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  50.29 
 
 
797 aa  453  1.0000000000000001e-126  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_007912  Sde_3112  putative methyl-accepting chemotaxis sensory transducer  51.31 
 
 
1029 aa  442  9.999999999999999e-123  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  49.58 
 
 
793 aa  439  1e-121  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_009075  BURPS668_A0206  methyl-accepting chemotaxis protein  48.73 
 
 
793 aa  404  1e-111  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0158  chemotaxis protein  50.85 
 
 
779 aa  399  9.999999999999999e-111  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.93 
 
 
701 aa  394  1e-108  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  54.89 
 
 
755 aa  395  1e-108  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  52.78 
 
 
752 aa  380  1e-104  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  52.94 
 
 
733 aa  377  1e-103  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  53.23 
 
 
753 aa  378  1e-103  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2418  methyl-accepting chemotaxis protein  60.94 
 
 
659 aa  375  1e-102  Vibrio cholerae O395  Bacteria  hitchhiker  0.00134538  n/a   
 
 
-
 
NC_007520  Tcr_0553  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.63 
 
 
888 aa  370  1e-101  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  52.15 
 
 
705 aa  369  1e-101  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  52.78 
 
 
740 aa  368  1e-100  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  51.63 
 
 
745 aa  361  2e-98  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  55.91 
 
 
706 aa  358  9.999999999999999e-98  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  43.11 
 
 
610 aa  359  9.999999999999999e-98  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  54.37 
 
 
843 aa  351  2e-95  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3301  methyl-accepting chemotaxis sensory transducer  51.26 
 
 
626 aa  342  2e-92  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  55.46 
 
 
569 aa  337  5.999999999999999e-91  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1530  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.31 
 
 
890 aa  336  7.999999999999999e-91  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.155082 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  58.96 
 
 
559 aa  333  5e-90  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_011071  Smal_3633  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.8 
 
 
845 aa  332  1e-89  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.522396 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  55.92 
 
 
572 aa  331  3e-89  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  54.62 
 
 
559 aa  330  4e-89  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  52.62 
 
 
579 aa  330  4e-89  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  55.26 
 
 
586 aa  329  1.0000000000000001e-88  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  54.79 
 
 
527 aa  327  5e-88  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  52.28 
 
 
586 aa  327  6e-88  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  56.33 
 
 
596 aa  326  7e-88  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  50 
 
 
578 aa  325  2e-87  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  53.94 
 
 
580 aa  323  5e-87  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  51.55 
 
 
583 aa  323  5e-87  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  54.8 
 
 
542 aa  323  7e-87  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  50.97 
 
 
589 aa  321  3e-86  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  51.19 
 
 
580 aa  320  3.9999999999999996e-86  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  65.75 
 
 
592 aa  320  5e-86  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  50.94 
 
 
559 aa  319  7.999999999999999e-86  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  59.4 
 
 
532 aa  318  1e-85  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  54.63 
 
 
579 aa  317  5e-85  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  57.42 
 
 
573 aa  316  7e-85  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  58.13 
 
 
653 aa  315  9.999999999999999e-85  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  60 
 
 
515 aa  315  1.9999999999999998e-84  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  59.72 
 
 
691 aa  315  1.9999999999999998e-84  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  60.75 
 
 
594 aa  315  1.9999999999999998e-84  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  58.13 
 
 
653 aa  315  1.9999999999999998e-84  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  57.63 
 
 
471 aa  313  7.999999999999999e-84  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  57.68 
 
 
532 aa  313  9e-84  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  57.82 
 
 
552 aa  313  9e-84  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  55.73 
 
 
584 aa  310  4e-83  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  56.08 
 
 
597 aa  310  4e-83  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  55.05 
 
 
537 aa  310  6.999999999999999e-83  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  59.25 
 
 
557 aa  310  6.999999999999999e-83  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  59.87 
 
 
566 aa  309  1.0000000000000001e-82  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  52.38 
 
 
554 aa  308  1.0000000000000001e-82  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  58.72 
 
 
621 aa  309  1.0000000000000001e-82  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  53.66 
 
 
551 aa  308  2.0000000000000002e-82  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  51.47 
 
 
591 aa  308  2.0000000000000002e-82  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  62.59 
 
 
577 aa  308  3e-82  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  63.67 
 
 
433 aa  308  3e-82  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  56.31 
 
 
598 aa  307  3e-82  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  57.94 
 
 
515 aa  307  4.0000000000000004e-82  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  55.24 
 
 
584 aa  307  4.0000000000000004e-82  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  55.37 
 
 
550 aa  306  5.0000000000000004e-82  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  57.19 
 
 
578 aa  307  5.0000000000000004e-82  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  61.7 
 
 
613 aa  307  5.0000000000000004e-82  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_010524  Lcho_1531  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.89 
 
 
1019 aa  306  5.0000000000000004e-82  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.301691 
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  64.06 
 
 
609 aa  305  1.0000000000000001e-81  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  51.59 
 
 
566 aa  306  1.0000000000000001e-81  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  58.28 
 
 
587 aa  305  1.0000000000000001e-81  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  65.78 
 
 
585 aa  305  1.0000000000000001e-81  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  54.85 
 
 
589 aa  305  1.0000000000000001e-81  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  57.63 
 
 
515 aa  305  1.0000000000000001e-81  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  55.89 
 
 
595 aa  305  2.0000000000000002e-81  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_008782  Ajs_3659  methyl-accepting chemotaxis sensory transducer  55.03 
 
 
550 aa  305  2.0000000000000002e-81  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  57.88 
 
 
585 aa  305  2.0000000000000002e-81  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  50.87 
 
 
567 aa  305  2.0000000000000002e-81  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  60.9 
 
 
539 aa  305  2.0000000000000002e-81  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  63.35 
 
 
617 aa  304  3.0000000000000004e-81  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  61.97 
 
 
515 aa  305  3.0000000000000004e-81  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  51.67 
 
 
557 aa  303  5.000000000000001e-81  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
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