More than 300 homologs were found in PanDaTox collection
for query gene VC0395_A2418 on replicon NC_009457
Organism: Vibrio cholerae O395



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009457  VC0395_A2418  methyl-accepting chemotaxis protein  100 
 
 
659 aa  1357    Vibrio cholerae O395  Bacteria  hitchhiker  0.00134538  n/a   
 
 
-
 
NC_009654  Mmwyl1_3301  methyl-accepting chemotaxis sensory transducer  50.17 
 
 
626 aa  502  1e-141  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2145  methyl-accepting chemotaxis protein  46.23 
 
 
781 aa  476  1e-133  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.297887  normal 
 
 
-
 
NC_011071  Smal_2405  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  46.51 
 
 
608 aa  470  1.0000000000000001e-131  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.152873  normal  0.816188 
 
 
-
 
NC_010581  Bind_0110  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.58 
 
 
588 aa  420  1e-116  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.885184  normal  0.0508963 
 
 
-
 
NC_011369  Rleg2_3632  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.95 
 
 
592 aa  421  1e-116  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.377399 
 
 
-
 
NC_012850  Rleg_3921  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.86 
 
 
586 aa  416  9.999999999999999e-116  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2893  methyl-accepting chemotaxis sensory transducer  42.31 
 
 
589 aa  414  1e-114  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4091  methyl-accepting chemotaxis protein  41.45 
 
 
592 aa  409  1e-113  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5255  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.53 
 
 
585 aa  400  9.999999999999999e-111  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.700683  normal 
 
 
-
 
NC_009484  Acry_1288  methyl-accepting chemotaxis sensory transducer  39.46 
 
 
591 aa  385  1e-105  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_1141  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.23 
 
 
501 aa  385  1e-105  Caulobacter sp. K31  Bacteria  normal  0.489477  hitchhiker  0.000166409 
 
 
-
 
NC_009484  Acry_1697  methyl-accepting chemotaxis sensory transducer  39.42 
 
 
591 aa  380  1e-104  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  58.93 
 
 
664 aa  380  1e-104  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_011989  Avi_2791  methyl-accepting chemotaxis protein  41.91 
 
 
622 aa  380  1e-104  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5535  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.12 
 
 
591 aa  377  1e-103  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.435889 
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  58.85 
 
 
664 aa  376  1e-103  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  60.94 
 
 
656 aa  377  1e-103  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  60.94 
 
 
656 aa  377  1e-103  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  62.25 
 
 
657 aa  378  1e-103  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  58.96 
 
 
665 aa  377  1e-103  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  49.59 
 
 
654 aa  374  1e-102  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  57.7 
 
 
657 aa  374  1e-102  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_2195  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.68 
 
 
577 aa  368  1e-100  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_2775  methyl-accepting chemotaxis protein  38.83 
 
 
558 aa  369  1e-100  Agrobacterium vitis S4  Bacteria  normal  0.536477  n/a   
 
 
-
 
NC_007520  Tcr_2004  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.74 
 
 
591 aa  365  1e-99  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  0.0000000000169064  n/a   
 
 
-
 
NC_011989  Avi_2952  sensory methylation accepting chemotaxis protein  38.1 
 
 
575 aa  350  5e-95  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011982  Avi_8025  sensory methylation accepting chemotaxis protein  36.19 
 
 
594 aa  347  3e-94  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  50.47 
 
 
679 aa  344  2.9999999999999997e-93  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  53.35 
 
 
755 aa  343  4e-93  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  53.63 
 
 
745 aa  338  9.999999999999999e-92  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  52.25 
 
 
752 aa  336  7e-91  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  55.89 
 
 
775 aa  334  3e-90  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  53.3 
 
 
679 aa  334  4e-90  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  53.52 
 
 
740 aa  332  2e-89  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  53.37 
 
 
733 aa  326  9e-88  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  59.18 
 
 
843 aa  325  1e-87  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  51.93 
 
 
580 aa  325  1e-87  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  49.72 
 
 
678 aa  325  2e-87  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  52.19 
 
 
586 aa  322  9.999999999999999e-87  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  55.84 
 
 
797 aa  322  9.999999999999999e-87  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  54.87 
 
 
572 aa  321  3e-86  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_011981  Avi_7643  sensory methylation accepting chemotaxis protein  40.82 
 
 
575 aa  320  5e-86  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  51.82 
 
 
583 aa  318  2e-85  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  52.27 
 
 
767 aa  318  2e-85  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  57.43 
 
 
705 aa  317  3e-85  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  57.14 
 
 
793 aa  317  6e-85  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  51.8 
 
 
527 aa  315  1.9999999999999998e-84  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  49.04 
 
 
589 aa  314  2.9999999999999996e-84  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  53.91 
 
 
569 aa  314  2.9999999999999996e-84  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  56.57 
 
 
559 aa  313  5.999999999999999e-84  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  54.6 
 
 
542 aa  313  9e-84  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  54.73 
 
 
580 aa  312  1e-83  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  50.28 
 
 
578 aa  312  1e-83  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  50.14 
 
 
586 aa  311  2e-83  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.61 
 
 
598 aa  311  2e-83  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  57.24 
 
 
753 aa  311  2.9999999999999997e-83  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  45.83 
 
 
579 aa  310  4e-83  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_007298  Daro_0729  PAS  53.5 
 
 
945 aa  310  5.9999999999999995e-83  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  57.33 
 
 
551 aa  309  1.0000000000000001e-82  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  49.62 
 
 
559 aa  309  1.0000000000000001e-82  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  49.6 
 
 
589 aa  309  1.0000000000000001e-82  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  58.3 
 
 
592 aa  309  1.0000000000000001e-82  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  55.67 
 
 
532 aa  308  2.0000000000000002e-82  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  50.86 
 
 
567 aa  308  3e-82  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  41.41 
 
 
792 aa  307  4.0000000000000004e-82  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  57.09 
 
 
706 aa  307  5.0000000000000004e-82  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  57 
 
 
471 aa  306  6e-82  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  49.35 
 
 
594 aa  306  7e-82  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  51.45 
 
 
585 aa  306  9.000000000000001e-82  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  55.08 
 
 
552 aa  306  9.000000000000001e-82  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  52.55 
 
 
591 aa  306  9.000000000000001e-82  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  53.94 
 
 
594 aa  306  1.0000000000000001e-81  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  61.19 
 
 
601 aa  305  2.0000000000000002e-81  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  54.83 
 
 
537 aa  305  2.0000000000000002e-81  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  56.21 
 
 
515 aa  304  4.0000000000000003e-81  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  55.16 
 
 
642 aa  303  4.0000000000000003e-81  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_012912  Dd1591_3580  methyl-accepting chemotaxis sensory transducer  45.99 
 
 
572 aa  303  5.000000000000001e-81  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  58.8 
 
 
557 aa  303  5.000000000000001e-81  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  47.57 
 
 
579 aa  303  9e-81  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  52.17 
 
 
653 aa  303  9e-81  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  52.17 
 
 
653 aa  302  1e-80  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  55.94 
 
 
573 aa  302  1e-80  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  50.47 
 
 
860 aa  301  2e-80  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  52.31 
 
 
536 aa  301  2e-80  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  58.57 
 
 
691 aa  301  2e-80  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.11 
 
 
609 aa  300  4e-80  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1934  methyl-accepting chemotaxis sensory transducer  60.07 
 
 
560 aa  300  4e-80  Methylobacillus flagellatus KT  Bacteria  normal  0.718562  normal 
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  55.67 
 
 
525 aa  301  4e-80  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  61.09 
 
 
532 aa  300  5e-80  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.78 
 
 
1123 aa  300  5e-80  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  52.2 
 
 
549 aa  300  5e-80  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  49.34 
 
 
587 aa  300  6e-80  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  57.53 
 
 
558 aa  300  7e-80  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  61.62 
 
 
617 aa  299  1e-79  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  52.88 
 
 
557 aa  299  1e-79  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.7 
 
 
864 aa  298  1e-79  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  55.22 
 
 
596 aa  299  1e-79  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  57.53 
 
 
573 aa  299  1e-79  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  56.54 
 
 
598 aa  299  1e-79  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
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