| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8025 |
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| Symbol | |
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| ID | 7365153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | + |
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| Start bp | 24955 |
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| End bp | 26739 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643641704 |
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| Product | sensory methylation accepting chemotaxis protein |
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| Protein accession | YP_002540001 |
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| Protein GI | 222080138 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACTTC TATCGATTTT TGGTAACGAT CTCGCTTATA TCATGAAGGC ATTCGATCGC
TCTCAGGCGA TCATTTCCTT TACGCCGGAT GGCAAGATCC TCGATGCCAA CGAGAATTTC
TGCAAGGCTA TCGGCTATAC CCGCGAAGAG ATCGTTGGCA AGAATCATCG CATGTTCATT
GACCCAAAAG AGGCTCAGTT GCCCGAATAC AAGGCCTTCT GGAAACGACT AGCTGACGGT
GAGTACGACC AGCGTCAGTA CAAGCGCATT GGCAAAGGTG GAAAGGAAAT CTGGATCGAG
GCGTCCTATA ACCCCGTCAT TCGCGGTGGC AAGGTGGTCA AGGTGGTCAA AATTGCAACT
GAGATAACCG CTTCAAAACA CGAAAGCCTG GAGAGTAAAG GTAAGCTTGA TGCGCTTTCG
CGCGCCCAGG CGATTATCGA GTTCATGCCC GACGGAAAAA TCCTGACAGC CAATAAGAAT
TTCCTCGAGA CACTCGGTTA CACGCTTGAG GAGATTGTTG GCAAGCATCA TGGAATATTC
TGCGAACCCG ATTTCGTGGC ATCGCGCGAA TATTCGGAAT TCTGGACGAG GCTTGCCAAA
GGCGAATACT ATAGCGATGA GTTCAAGCGC ATCCGCAAAG ATGGTAGCCC AGTCTATATA
CAGGCAACCT ATAACCCGAT CTTGGACGAG GACGGCAACG TCTTCAAGGT TGTGAAATTT
GCGACCGATG TATCCGGGCG CGTCTTGGCG CTGCAAAAGA TTGGATCGGG GCTCGAGCGC
CTCTCAGACT GCAATATACG TGTTACTATC GACGAACCCT TCGTCGAAGA ATTCGAACAT
CTACGCCACG ACTTCAACGA GTCGCTCGCC AAATTCCAGG AGACGCTGGA AGAGGTTTTG
TCACAGACCA CCATGCTCTC TTCAAAAAGT GGAGACATGA GCGAGAGCGC AAACGGCATT
GCCCAACGCT CGGAGCAGCA GGCAGCAGCA CTGGAAGAAA CCTCGGCTGC ACTGGAAGAA
ATTACTGTGA CTGTTCGTGA GTCCGTTGGG AGAACAGCCG AGGCAAGAGA CCTGGTTCGA
GACGCTCGGT CCGCCGCCTC AAAATCGGTT CAAATCGTCA ATTCTACCGT GAATGCGATG
GGGCGAATCG AGGCTGCGTC GAGGGAAATC ACAAACATTA TTGACGTGAT CGACCAGATC
TCATTTCAAA CAAATCTTCT CGCCCTGAAC GCCGGTGTTG AAGCAGCGCG CGCTGGTGAC
GCCGGCAAGG GCTTTGCGGT TGTAGCACAA GAGGTACGAG AGCTTGCTCA GCGGTCAACC
AAAGCCGCCA AAGAAATCGC CGTTCTTATC GGCAATTCTT CAAATGCGGT GAAGGACGGT
GTGCGCCTGG TAGGCGAAAC GGGCGATGCC CTTAAGAGCA TCGAAGGCTA TGTGCAGTCG
ATAGATGCAA ACATCGATGG TATCGCGTTG GCATCGTCAG AGCAGTCGAC CAGTCTCAAT
GAGATCAACT CAGCTGTGAA CTCCCTTGAC CAGATGACTC AACAAAATGC TGGCATGGTG
AGCAGCATGG GCACCATTGC CGAAGCTGTG GCATCCGGCG CTGCGGGGCT TGAAGCGCTT
GTTAAACGCT TCAAGCTCAA CCGTCGCGAG TGGATCCGCG AACCGGGTTC AGAGGCAGCA
AAGCTTGGTC CGGAAAGCAG GGGGTATGGT AAGAATACGA TTTACCAACC CGAGCGTGCT
CATCAACAGA CGAAAGGCTC TTCTAAGGTG AAGCTTGCCT CGTGA
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| Protein sequence | MRLLSIFGND LAYIMKAFDR SQAIISFTPD GKILDANENF CKAIGYTREE IVGKNHRMFI
DPKEAQLPEY KAFWKRLADG EYDQRQYKRI GKGGKEIWIE ASYNPVIRGG KVVKVVKIAT
EITASKHESL ESKGKLDALS RAQAIIEFMP DGKILTANKN FLETLGYTLE EIVGKHHGIF
CEPDFVASRE YSEFWTRLAK GEYYSDEFKR IRKDGSPVYI QATYNPILDE DGNVFKVVKF
ATDVSGRVLA LQKIGSGLER LSDCNIRVTI DEPFVEEFEH LRHDFNESLA KFQETLEEVL
SQTTMLSSKS GDMSESANGI AQRSEQQAAA LEETSAALEE ITVTVRESVG RTAEARDLVR
DARSAASKSV QIVNSTVNAM GRIEAASREI TNIIDVIDQI SFQTNLLALN AGVEAARAGD
AGKGFAVVAQ EVRELAQRST KAAKEIAVLI GNSSNAVKDG VRLVGETGDA LKSIEGYVQS
IDANIDGIAL ASSEQSTSLN EINSAVNSLD QMTQQNAGMV SSMGTIAEAV ASGAAGLEAL
VKRFKLNRRE WIREPGSEAA KLGPESRGYG KNTIYQPERA HQQTKGSSKV KLAS
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