| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2195 |
|---|
| Symbol | |
|---|
| ID | 6975623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 2432853 |
|---|
| End bp | 2434586 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643391724 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
|---|
| Protein accession | YP_002276568 |
|---|
| Protein GI | 209544339 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGAT TTCGGCACCG CGACCGGACG GACGCACGGG CGACGCTGGC GGCGCTCGAC
CGTTCCCTCG CGATCATCGA GTTCGACCCC ACGGGAAAGA TCCTGACGGC CAACGCGAAT
TTCTGCACGG CAATGGGCTA CCGGCTGGAC GAGATCCAGG GCCGGTCCCA CAGCATGTTC
GTCGATCCCG ACGAGGCCCG AAGCCCCGAA TACACGGCAT TCTGGGCCAG GCTGGCCCGT
GGCGAGTTCG AGGCACGGGA CTATATGCGT ATCGGCAAGG GCGGCGAGGA GATCTGGGTT
CAGGCGTCCT ACAACCCGGT GCGCAACTGG CGCGGCGCGG TGACCAGGAT CGTGAAGGTG
GCGACGGTCA TCACCGACGA AACGCTTCGG AATGCCGATT TCGCGGGCAA GATCGAAGCG
ATTTCCCGCT CCCAGGCCGT GATCGAATTC ACGCCGGACG GGCACGTCCT GACCGCCAAC
GACAATTTCC TCAACGCCCT GGACTACCGG CTGGACGAAA TCCAGGGCCG TCATCACCGC
ATGTTGGTCG AGCCGGAATT CGCACGTTCC GGTGCCTATG ACGCATTCTG GAAAAAGCTG
CGGAACGGCG AATTCGTCGC CGCCGAATTC AGGCGGATCG GCAAGCATGG CAAGGTGGTC
TGGATCCAGG CCTCGTACAA TCCGATTTTC GACCGGAAGG GACGGGTCAT CAAGGTCGTG
AAGTTCGCGA CCGACGTCAC CAGCCGCGTG AACGCCGTGG ACGGGATCGT CGGCGCGCTG
GAGGAACTGG CCTGCAACAA CCTCGCCTAC CGGCTCGAAG GCCCGATCGA TTCCGCTTAC
GAGAAGGTGC GGGACGATTT CAACGCGGCC CTGGACATGC TGGAAGAGAC GATGGTGGCC
ATTGCCGCCT CGGCCGGCGG CGTGGGCAAC GGCGCGCACG AAATCGCCTC GGCCTCGGGC
GACCTGTCGC GCCGGACTGA AACGCAGGCC GCCAGCCTGG AAGAAACCGC CGCCGCCCTG
AACGAGATCA CGGCCACGGT GACCCGTAGC GCCCAGGGCG CGCAAGAGGC GTCAACGGCC
GCCTCGGCGG CGCGCGGCGA TGCCGGGAAG TCCGGCAAGG TCGTGCGGGA AACGGTTTCC
GCCATGGGCG AAATCCGGGA TTCGTCGCGC GAGATCACGC AGATCGTCAG CGTGATCGAC
CAGATCGCCT TCCAGACCAA CCTGCTGGCG CTCAATGCCG GGGTCGAGGC CGCACGTGCC
GGGGACGCCG GCCGCGGTTT CGCCGTGGTG GCGTCCGAGG TCCGCGCCCT GGCCCAGCAA
TCGGCGCAGG CGGCGCGCGA GATCAGGGCC CTGATCGACA GGTCCGGCGC CCATGTCGAG
CGCGGCGTGA AACTGGTGGG CGAAACCGGG GACGCCCTGG CCGCGATCGT GGCCAGGGTG
GCCCAGATCG ACACGCTGGT ATCGGACATC GCGGCGTCGT CCCAGCAGCA GGCCATGGGG
CTGGCCCAGG TCAATGTCGC GGTCACCCAA CTGGACCAGA TGACCCAGCA GAACGCCGCC
ATGGTCGAGG AAACGACCGC CGCCACGGCC AGCCTGAACC AGGAATCCCG GGAACTGACG
CGGCTGATCG GCCGGTTCCA GACCCGGGGT GGAGAACCGC GCCCGCGGGC CCTGCCGCAA
TCCGCCCGGC CGCAGGCGCC CACACAGGTC GCCTATCGGC GGCTGTCCGC GTAA
|
|---|
| Protein sequence | MFGFRHRDRT DARATLAALD RSLAIIEFDP TGKILTANAN FCTAMGYRLD EIQGRSHSMF
VDPDEARSPE YTAFWARLAR GEFEARDYMR IGKGGEEIWV QASYNPVRNW RGAVTRIVKV
ATVITDETLR NADFAGKIEA ISRSQAVIEF TPDGHVLTAN DNFLNALDYR LDEIQGRHHR
MLVEPEFARS GAYDAFWKKL RNGEFVAAEF RRIGKHGKVV WIQASYNPIF DRKGRVIKVV
KFATDVTSRV NAVDGIVGAL EELACNNLAY RLEGPIDSAY EKVRDDFNAA LDMLEETMVA
IAASAGGVGN GAHEIASASG DLSRRTETQA ASLEETAAAL NEITATVTRS AQGAQEASTA
ASAARGDAGK SGKVVRETVS AMGEIRDSSR EITQIVSVID QIAFQTNLLA LNAGVEAARA
GDAGRGFAVV ASEVRALAQQ SAQAAREIRA LIDRSGAHVE RGVKLVGETG DALAAIVARV
AQIDTLVSDI AASSQQQAMG LAQVNVAVTQ LDQMTQQNAA MVEETTAATA SLNQESRELT
RLIGRFQTRG GEPRPRALPQ SARPQAPTQV AYRRLSA
|
|---|
| |