| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0164 |
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| Symbol | |
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| ID | 6114387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 200554 |
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| End bp | 203925 |
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| Gene Length | 3372 bp |
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| Protein Length | 1123 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641631645 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_001758560 |
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| Protein GI | 170724534 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCAA ACTACGCCAA CATATCAAAC ACTAGAGCCT TGCCGATAGC AGGTTTGCTG
GTCAGTGCTA TTGCCTTAGC CTTATCCTTA ACAGGACAAG CAACAAGTTG GATAGCAACG
GCTCAGGTCC TCGCTATCTT ATTGATTGCT GCTGGCCTAC TTAAGCTAAC TCAATGGCAA
AAGCACACAG ATCAAGCGCT TAATGAAGTT AGCAACGCTT TACTCAATAA TGAACCTCCG
CACTTTTCCG ACATAGATCT GCCTAGCTGG GGGCTCCTGA CCAACAGGAT TGAGGAGTTG
CATCATAAGC GACAACAAGA TGAAACCACC ATCAAGGCAC TGGATGTTTG TCAGGCCAAT
GTCATGATGG CTGATGCCGA CTTTAACATT TCCTATATGA ATGATTCAGT TACCGAAATG
CTTAGCCAAA ATGAAAAAGC CCTTCAAAGC AGTCTTTCTA ATTTCGATAC TAAGAATCTC
ATCGGCAAAA GTATTGATAT GTTTCACAGT AACCCAGCCC ATCAAAGAAG AGTCCTTGAA
AGCCTTAATG GTAGCCACGA AGCAAACATT GAAGTAGCAG GATTAAAGTT TAATCTCATC
GCCAGTCCAA TTTTTGTAAA CGGAAAACGA ACAGGTACTG TGGTTGAATG GATAGATATG
ACAGAGAAAC TTGCCAAAGA GGCTGAAGAG AAAAGAACTT CAGCAGAAAC TGGCCGCGTA
AAACAAGCGC TGGATGTGTG TAAGGCCAAT GTCATGATGG CTGATGCAGA TTACAATATT
GTCTACTTCA ACGAATCACT TAAAGAGATG CTATCTGAAA ATGAACGCAC TCTGCAGGAG
AGCCTAAGTA AATTCGATAT GTCTACACTA ATGGGCTCCA ATATCGATAT CTTCCATAAA
AACCCAGCCC ATCAACGAGG TATGTTAGAC AGACTTACCA GTACCTATGA GACTGATATT
AAAGTATCAG GCCTCACCTT CAGTCTGATC GCAACGCCAG TCTTCGATAA TGGAGAACGA
ACAGGTACCG TCGTCGAATG GCAAGATATT ACCGCAAAAC TCGCTAAAGA AGCCGAAGAA
CAACAGCAAG CTGCAGAAAC AGGCCGTGTT AAACAAGCAC TGGATGTGTG TAAAGCCAAC
GTGATGATGG CTGATGCAGA TTACAATATT GTCTACTTTA ACGACTCCCT CAAAGAGATG
TTGAGTGAAA ATGAGCGTAC CTTGCAAGAG AGCCTTAATC AATTCGACAT GTCCACCTTA
ATGGGTTCCA ATATCGATAT TTTCCACAAA AACCCAGCTC ATCAACGAGG TATGTTAGAT
AGACTTACCA GCACCTATGA GACTGATATT AAAGTATCAG GCCTCACCTT CAGTCTCATT
GCAACGCCAG TCTTCGATAA TGGAGAACGA ACAGGTACCG TCGTCGAATG GCAAGATATT
ACCGCAAAAC TCGCTAAAGA AGCGGAAGAT AAACAGGCCG CAGCTGAGAC AGGACGCGTT
AAACAAGCAT TGGATGTATG CCAAGCAAAC GTGATGATGG CAAATGCAGA TTATGAGATC
ATCTACTTTA ATGATTCTCT TAAAGCTATG CTCTCTGAGA ATGAACGTAA GTTACAAGAA
ACTCTCACCC GATTCGATAT GACAACCTTA ATGGGCGCCA ATATCGATAT ATTCCATCAA
AAACCAAGCC ACCAGCGCAA TCTTCTAGAC AAACTAACCA GTACTTATGA AACCAGTATC
AAAGTATCAG GCTTAACCTT TAACTTAATC GCGACACCAG TATTTAATAA TGGCGAGCGC
ACTGGAACCG TAGTGGAGTG GTTAGATGTG ACTGCTAAGC TGGCTAAAGA AGCCGAAGAG
CAGAAACTGG CAGCTGAAAA TGCACGAATT AAACAAGCTC TCGATAACGT ATCAGCCAAT
ACCATGGTGG CTGACGCAGA TCTAAATATT ATCTATATGA ACAATGCAGT GTCCAATATG
TTTAGAGCAG CACAATCAGA CATTGTCAAA GATCTGCCTA ACTTCGACGC TAATAATCTC
ATCGGGGTTA ATATAGACGG CTTCCATAAA AACCCAAGCC ATCAACGTAA CCTCTTGGGT
AATCTAAACA GCACCTATTC AAGCCAGCTC CACGTTGGTG GTCGAACCTT CAAAGTTGTT
GCTAATCCAA TAAAAGACAC CAACGGTGAC AAGATAGGGA CAGTCGTTGA GTGGACCGAC
CGTACAGCAG AGGTGGCAAT AGAACATGAG ATAGACACAA TAATTTCAGC GGCTGCGGCT
GGTGACTTAA GCCACAGAGT ATCTACCGAT GGGAAAGAGG GCTTCTTCCT CAATCTGTCC
AATGGACTAA ACCGTTTAGT TGGTATTGCA GATAGCGTTA TCTCCGATGT GGTCAATATG
TTTGACGGGC TTGCTAAAGG CGATTTAACC CGCCAAATAA ATGGAGATTA CGATGGTCAG
TTCCGCAAAT TACAAACTGA TGCAAACGCG ACAGCATCGA GGCTAACAGA AGTAATTGGG
GGCATTAACG AGTCAGCCAA TACGGTGACA TCTGGTGCAG AAGAGATAGC TCAAGGTAAC
TCAGACCTTA GTCAACGAAC CGAAGAGCAA GCAGCCTCTC TCGAAGAGAC AGCATCAAGT
ATGGAAGAGA TGACAGCCAC TGTAACTCAA AGTGCCCAAA ATGCGACACT GGCGAATGAG
TTAGCTCAGG AAGCAAATAC TAAAGCCGAT CATGGCGGTA AGGTGGTAGA GCAAGCCGTC
ACAGCCATGG AAGCCATCAA TGATTCCAGT AAGCGTATCT CTGATATCAT TGGTGTTATT
GACGAAATCG CATTCCAAAC TAACTTATTA GCACTAAACG CAGCAGTTGA GGCCGCAAGA
GCAGGTGAGC AGGGACGAGG TTTTGCCGTC GTTGCCGGAG AGGTTCGAAA CCTAGCACAA
CGAAGTGCAG GAGCCGCGAA GGAGATTAAA GAGCTGATAC GCGACAGCGT AGGTAAGGTA
ACAGATGGTA CTCAGCTGGT GAATCAATCA GGAGAAACAC TACAAGACAT AGTGCAAGCC
GTCACAAAAG TGGCTGATAT GATAAGCCAA ATTAGTATTG CATCAGACCA GCAGTCCTCA
GGGATCCAGG AAGTTAATAA AGCGATCTCT CAGATGGATG AGATGACTCA ACAAAATGCA
GCATTGGTTG AAGAGGTCTC TGCTGCAGGG GACGCCATGG CAGAGCAGGC TCGTAATATG
AAGAATCAGC TCAGCTTCTT TCAAGCTAAA GAGCAAACTA GCTCAGGTCT CACTTCAGCA
CCACTGGCAT TAGTTTCCGG CGACTCCCAT GGAAATCTCA ATATTAGTGA TGAAGAGTGG
AATGAATTTT AG
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| Protein sequence | MEANYANISN TRALPIAGLL VSAIALALSL TGQATSWIAT AQVLAILLIA AGLLKLTQWQ
KHTDQALNEV SNALLNNEPP HFSDIDLPSW GLLTNRIEEL HHKRQQDETT IKALDVCQAN
VMMADADFNI SYMNDSVTEM LSQNEKALQS SLSNFDTKNL IGKSIDMFHS NPAHQRRVLE
SLNGSHEANI EVAGLKFNLI ASPIFVNGKR TGTVVEWIDM TEKLAKEAEE KRTSAETGRV
KQALDVCKAN VMMADADYNI VYFNESLKEM LSENERTLQE SLSKFDMSTL MGSNIDIFHK
NPAHQRGMLD RLTSTYETDI KVSGLTFSLI ATPVFDNGER TGTVVEWQDI TAKLAKEAEE
QQQAAETGRV KQALDVCKAN VMMADADYNI VYFNDSLKEM LSENERTLQE SLNQFDMSTL
MGSNIDIFHK NPAHQRGMLD RLTSTYETDI KVSGLTFSLI ATPVFDNGER TGTVVEWQDI
TAKLAKEAED KQAAAETGRV KQALDVCQAN VMMANADYEI IYFNDSLKAM LSENERKLQE
TLTRFDMTTL MGANIDIFHQ KPSHQRNLLD KLTSTYETSI KVSGLTFNLI ATPVFNNGER
TGTVVEWLDV TAKLAKEAEE QKLAAENARI KQALDNVSAN TMVADADLNI IYMNNAVSNM
FRAAQSDIVK DLPNFDANNL IGVNIDGFHK NPSHQRNLLG NLNSTYSSQL HVGGRTFKVV
ANPIKDTNGD KIGTVVEWTD RTAEVAIEHE IDTIISAAAA GDLSHRVSTD GKEGFFLNLS
NGLNRLVGIA DSVISDVVNM FDGLAKGDLT RQINGDYDGQ FRKLQTDANA TASRLTEVIG
GINESANTVT SGAEEIAQGN SDLSQRTEEQ AASLEETASS MEEMTATVTQ SAQNATLANE
LAQEANTKAD HGGKVVEQAV TAMEAINDSS KRISDIIGVI DEIAFQTNLL ALNAAVEAAR
AGEQGRGFAV VAGEVRNLAQ RSAGAAKEIK ELIRDSVGKV TDGTQLVNQS GETLQDIVQA
VTKVADMISQ ISIASDQQSS GIQEVNKAIS QMDEMTQQNA ALVEEVSAAG DAMAEQARNM
KNQLSFFQAK EQTSSGLTSA PLALVSGDSH GNLNISDEEW NEF
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