Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0151 |
Symbol | |
ID | 5134873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 175767 |
End bp | 177803 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640530474 |
Product | methyl-accepting chemotaxis protein |
Protein accession | YP_001214992 |
Protein GI | 147672062 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTTT GGAATCGTAA ACAACAGGTT GTGCCCCAGT TTGTTGAGCC AGCCAAGGAG AGCGCCACGA GCGAATTTGA CGAGTCGGAG ACCCAAAGCG GTTTATCTAA CTATCAATTG CTTTCCGCAC TCAATGCGGC ACAAACAGCA CTGATGATGA TAGATCGCGA CTTTCGGATC ACCTACTTCA ATAATCAAAC GCTCAAGCTG CTAAAACAAC ACGAAACGTT GTTTCGTAGC GTCTGGCCTG ATTTTCGTGC CGAGGCCGAT TTTTTACATG GCTACTGCAT TGACCATTTT CATCTTAACC CTCGCCATCA GCGCACCATG CTCGCGGATC CGAGCCATTT ACCCTACACC ACCGTCATCA ACATCAAAGG AGTAAAAATC GAGCTGATTG TAGGCGCGAT TATTGATGAT CGTGGTTCTT ACATTGGCAA TACCTTGGAA TGGCGTGATG TGACCGAAGA GCTCTTGCGT GATCAGCAAA TAGGTCGTTT AGCTTCGGCG GTCGAAGGCA TGACGACGAA TTTGATGATG GCGGATAAAG AGGGGATTAT TCAATATCTT AACCCCGCAC TGTTACAACT GTTGACCCAC CGTGAACCAG AACTCGCGCA GGCCTTTCCC GGCTTTAAAG CCGCGGAGTT GGTGGGGAAA AATATCGACA TTTTCCATAA AAATCCTGCA CATCAGCGTT CGATCATTAG TAACCCAGAA CGCTTGCCTT TCACCTCCAT GATCAAAGTG GGCTCTTTAG AGTTTAATCT GACTTGTATT GCGATGCGCG ATACAAAAGG CGAATACATA GGTCCTGCGT TGCAATGGGT AGATATCACC GAGCAGCGTG ATGGCCAGCG CCAAGTGGAG TCTTTGATCC AAAAAGCGAT TAAAGGTGAC CTGCATGACC GGATCAATAC CAGTGGCTAC AACGGTTTTA TGCGTGAGTT GGGAGATGGC ATCAATAACT TGCTTAACAC GCTGGTGGAA CCATTGGGCC AGTGTATTAC GGTGATGAGC CGAGTGGCTG AAGGCGATCT CAATACCAGC ATGTCTGAAG AGTACCAAGG CGAATTTGGT CGATTAGCCA GTGCGGTCAA CGCTTCGATT GTGAACCTAC GCAATATGGT CGACAAAATT ACCGTTTCTT CTGCTCGAGT TGCGACCGCT TCTACAGAGA TAGCGGATGG CAATAACGAT CTCAGCCAGC GTGTGGAAGC TCAGGCTTCT AACTTGGAAG AAACTGCCGC CAGTATGGAA GAGATAACAG CAACCGTGCG TCAAAATGCG GATAACGCGA AAGATGCCAA TCTACTTGCG ACCGATGCGG CGAAAAAAGC TGCCCGAGGC GGAGAAGTGG TTGGTGAAGC CATCAGCGCG ATGGGGGCAA TCAATACCGC CAGTAAGAAA ATTGCGGACA TCATTAGCGT GATTGATGAA ATCGCTTTCC AAACCAACTT GTTGGCTCTG AATGCTGCGG TAGAAGCGGC GCGGGCCGGT GAACAAGGGC GTGGCTTTGC CGTGGTTGCC GGAGAAGTGC GTAATCTCGC GCAGCGTAGT GCCGGAGCGG CGAAAGAGAT TAAAGGTTTG ATTAACGATA GTGTCGATAA GGTGAATGAA GGCTCACGCT TAGTCAATGA ATCGGGATCG ACACTTAAAG AAATTGTTGA AGCGGTAGTG AGAGTCTCGG ATCTGATTGC ACAGATCGCC GCTTCCAGTG TGGAGCAATC CACGGGCATT GATGAAATCA ACCGAGCGAT TGCTGCTATG GATGAAATGA CCCAGCAGAA CGCTTCACTG GTGGAAGAAA CATCAGCGGC GAGTCAGTCA CTCAAAGATG AAGGAAAAGA GCTGCTTAAT TTGATGAATT TCTTTGTCAC CGAAAATAAT GTCACCACTT TTGAGCGCAA ACCTCGCCAA TCAACGCCAC CCAAAACCAA GCCTGTGGTT AGCATGCATA AAGCACCGAT AAATCAGGCC GTACATAAAA TGCCAGCTCG GGCGGCAGAA GAAGGTGACG AATGGGAAGA ATTCTAA
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Protein sequence | MAFWNRKQQV VPQFVEPAKE SATSEFDESE TQSGLSNYQL LSALNAAQTA LMMIDRDFRI TYFNNQTLKL LKQHETLFRS VWPDFRAEAD FLHGYCIDHF HLNPRHQRTM LADPSHLPYT TVINIKGVKI ELIVGAIIDD RGSYIGNTLE WRDVTEELLR DQQIGRLASA VEGMTTNLMM ADKEGIIQYL NPALLQLLTH REPELAQAFP GFKAAELVGK NIDIFHKNPA HQRSIISNPE RLPFTSMIKV GSLEFNLTCI AMRDTKGEYI GPALQWVDIT EQRDGQRQVE SLIQKAIKGD LHDRINTSGY NGFMRELGDG INNLLNTLVE PLGQCITVMS RVAEGDLNTS MSEEYQGEFG RLASAVNASI VNLRNMVDKI TVSSARVATA STEIADGNND LSQRVEAQAS NLEETAASME EITATVRQNA DNAKDANLLA TDAAKKAARG GEVVGEAISA MGAINTASKK IADIISVIDE IAFQTNLLAL NAAVEAARAG EQGRGFAVVA GEVRNLAQRS AGAAKEIKGL INDSVDKVNE GSRLVNESGS TLKEIVEAVV RVSDLIAQIA ASSVEQSTGI DEINRAIAAM DEMTQQNASL VEETSAASQS LKDEGKELLN LMNFFVTENN VTTFERKPRQ STPPKTKPVV SMHKAPINQA VHKMPARAAE EGDEWEEF
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