Gene VC0395_0151 details

Gene Information

• Locus tag: VC0395_0151
• ID: 5134873
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009456
• Strand: +
• Start bp: 175767
• End bp: 177803
• Gene Length: 2037 bp
• Protein Length: 678 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640530474
• Product: methyl-accepting chemotaxis protein
• Protein accession: YP_001214992
• Protein GI: 147672062
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 59
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTTT GGAATCGTAA ACAACAGGTT GTGCCCCAGT TTGTTGAGCC AGCCAAGGAG 
AGCGCCACGA GCGAATTTGA CGAGTCGGAG ACCCAAAGCG GTTTATCTAA CTATCAATTG 
CTTTCCGCAC TCAATGCGGC ACAAACAGCA CTGATGATGA TAGATCGCGA CTTTCGGATC 
ACCTACTTCA ATAATCAAAC GCTCAAGCTG CTAAAACAAC ACGAAACGTT GTTTCGTAGC 
GTCTGGCCTG ATTTTCGTGC CGAGGCCGAT TTTTTACATG GCTACTGCAT TGACCATTTT 
CATCTTAACC CTCGCCATCA GCGCACCATG CTCGCGGATC CGAGCCATTT ACCCTACACC 
ACCGTCATCA ACATCAAAGG AGTAAAAATC GAGCTGATTG TAGGCGCGAT TATTGATGAT 
CGTGGTTCTT ACATTGGCAA TACCTTGGAA TGGCGTGATG TGACCGAAGA GCTCTTGCGT 
GATCAGCAAA TAGGTCGTTT AGCTTCGGCG GTCGAAGGCA TGACGACGAA TTTGATGATG 
GCGGATAAAG AGGGGATTAT TCAATATCTT AACCCCGCAC TGTTACAACT GTTGACCCAC 
CGTGAACCAG AACTCGCGCA GGCCTTTCCC GGCTTTAAAG CCGCGGAGTT GGTGGGGAAA 
AATATCGACA TTTTCCATAA AAATCCTGCA CATCAGCGTT CGATCATTAG TAACCCAGAA 
CGCTTGCCTT TCACCTCCAT GATCAAAGTG GGCTCTTTAG AGTTTAATCT GACTTGTATT 
GCGATGCGCG ATACAAAAGG CGAATACATA GGTCCTGCGT TGCAATGGGT AGATATCACC 
GAGCAGCGTG ATGGCCAGCG CCAAGTGGAG TCTTTGATCC AAAAAGCGAT TAAAGGTGAC 
CTGCATGACC GGATCAATAC CAGTGGCTAC AACGGTTTTA TGCGTGAGTT GGGAGATGGC 
ATCAATAACT TGCTTAACAC GCTGGTGGAA CCATTGGGCC AGTGTATTAC GGTGATGAGC 
CGAGTGGCTG AAGGCGATCT CAATACCAGC ATGTCTGAAG AGTACCAAGG CGAATTTGGT 
CGATTAGCCA GTGCGGTCAA CGCTTCGATT GTGAACCTAC GCAATATGGT CGACAAAATT 
ACCGTTTCTT CTGCTCGAGT TGCGACCGCT TCTACAGAGA TAGCGGATGG CAATAACGAT 
CTCAGCCAGC GTGTGGAAGC TCAGGCTTCT AACTTGGAAG AAACTGCCGC CAGTATGGAA 
GAGATAACAG CAACCGTGCG TCAAAATGCG GATAACGCGA AAGATGCCAA TCTACTTGCG 
ACCGATGCGG CGAAAAAAGC TGCCCGAGGC GGAGAAGTGG TTGGTGAAGC CATCAGCGCG 
ATGGGGGCAA TCAATACCGC CAGTAAGAAA ATTGCGGACA TCATTAGCGT GATTGATGAA 
ATCGCTTTCC AAACCAACTT GTTGGCTCTG AATGCTGCGG TAGAAGCGGC GCGGGCCGGT 
GAACAAGGGC GTGGCTTTGC CGTGGTTGCC GGAGAAGTGC GTAATCTCGC GCAGCGTAGT 
GCCGGAGCGG CGAAAGAGAT TAAAGGTTTG ATTAACGATA GTGTCGATAA GGTGAATGAA 
GGCTCACGCT TAGTCAATGA ATCGGGATCG ACACTTAAAG AAATTGTTGA AGCGGTAGTG 
AGAGTCTCGG ATCTGATTGC ACAGATCGCC GCTTCCAGTG TGGAGCAATC CACGGGCATT 
GATGAAATCA ACCGAGCGAT TGCTGCTATG GATGAAATGA CCCAGCAGAA CGCTTCACTG 
GTGGAAGAAA CATCAGCGGC GAGTCAGTCA CTCAAAGATG AAGGAAAAGA GCTGCTTAAT 
TTGATGAATT TCTTTGTCAC CGAAAATAAT GTCACCACTT TTGAGCGCAA ACCTCGCCAA 
TCAACGCCAC CCAAAACCAA GCCTGTGGTT AGCATGCATA AAGCACCGAT AAATCAGGCC 
GTACATAAAA TGCCAGCTCG GGCGGCAGAA GAAGGTGACG AATGGGAAGA ATTCTAA 

 

Protein sequence

MAFWNRKQQV VPQFVEPAKE SATSEFDESE TQSGLSNYQL LSALNAAQTA LMMIDRDFRI 
TYFNNQTLKL LKQHETLFRS VWPDFRAEAD FLHGYCIDHF HLNPRHQRTM LADPSHLPYT 
TVINIKGVKI ELIVGAIIDD RGSYIGNTLE WRDVTEELLR DQQIGRLASA VEGMTTNLMM 
ADKEGIIQYL NPALLQLLTH REPELAQAFP GFKAAELVGK NIDIFHKNPA HQRSIISNPE 
RLPFTSMIKV GSLEFNLTCI AMRDTKGEYI GPALQWVDIT EQRDGQRQVE SLIQKAIKGD 
LHDRINTSGY NGFMRELGDG INNLLNTLVE PLGQCITVMS RVAEGDLNTS MSEEYQGEFG 
RLASAVNASI VNLRNMVDKI TVSSARVATA STEIADGNND LSQRVEAQAS NLEETAASME 
EITATVRQNA DNAKDANLLA TDAAKKAARG GEVVGEAISA MGAINTASKK IADIISVIDE 
IAFQTNLLAL NAAVEAARAG EQGRGFAVVA GEVRNLAQRS AGAAKEIKGL INDSVDKVNE 
GSRLVNESGS TLKEIVEAVV RVSDLIAQIA ASSVEQSTGI DEINRAIAAM DEMTQQNASL 
VEETSAASQS LKDEGKELLN LMNFFVTENN VTTFERKPRQ STPPKTKPVV SMHKAPINQA 
VHKMPARAAE EGDEWEEF