| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2418 |
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| Symbol | |
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| ID | 5136124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2571707 |
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| End bp | 2573686 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533870 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_001218318 |
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| Protein GI | 147673102 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00134538 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTTAT TGGCACGTCT TTTCTCTACA GCACCACATC ATCCGACGCA ACCAGCGGAG
GTTAAGCCAG ACCCGCTGAT GCAATCTCCG GTAACCACCG AGACGACGGC ATTACAGCCA
GAACCACAGG TTGCGCCTTA TCAAACTGAC CTTGCGCTCA CCACGCCAGA GTCAGACCTC
ACACCCCAAG TCAATCAAGC TTTTGTTCAG GTGATTCGTG AACATCTGGC ACTGTTGGAA
TGTGAGCCCA ACGGCACGAT TTGCTATGCC AGTGATGCGT TTGCTCATCT CTGTCGGGTA
TCGGCTGAAG CGATGGTCGG AGCGGATTTT GCGAACTTAT GGCGCACTCA TCAGCAGCCA
TCTGTGCAGC GCTTGCTGCA GGATGCTAAA AAAGGACACC CTGTTTCTGC CGAATTACAG
CTCAGCCGCT CGCAAGAGGC AATCTGGATA AAAGCGGATC TGTATCCCAT CAAGGCGATA
AACGGTCAAT TACAAAACGT GGTGGTACTG TTGCAAGATA TCACTGCGGC CAAGCTGGAA
AAAATTGACC GTAGTGGTCA AATGAATGCG GTCAATCTCA CCCAAGCCGT GATTGAATTT
ACGCTCGATG GCACCATTCT GACTGCAAAT CAGAATTTTC TGCAAACGGT GGGCTATCAG
TTGGATGAGA TCCAAGGGCG GCACCACAGC ATGTTTGTTG ATGAGCAGTA TAAACAGAGT
CAAGAGTACC AACATTTCTG GCAGCGTTTG CGCTCCGGCG AATTCTTTGT CGACGAATAC
AAACGTTTCG GCAAAGGGGG GAAAGAGATC TGGATCCAAG CCAGCTATAA CCCGATTATG
GACAGCGAGG GTAAACCGTA TAAGGTTGTC AAATATGCCA CCAACGTGAC TCAGCGTAAG
ATGGTGGTCA ATGAAGTCAA ACGCGTCATG ACGGCGCTCT CCAGCGGCGA TCTCAGTGCA
CAACTCACGC ATCCTTTTGA AGGTGAATTT GCTGAGCTCG GTGAGGTGAT CAGTCAATTC
ATTGTCACAT TGCGTCAAAT CATTACTGAC ATCAACAGCG TCGCCGCGAC CATCAAGCTA
GCAGCGACGG AGATTTCCAA TGGCAATACC GACCTCTCTA GCCGAACCGA GCAACAAGCC
TCCAATCTGG AGCAAACGGC CTCCAGCATG GAAGAGCTAA ACAGCACGGT GCGACAAAAC
TCGGATAACG CCATGCAGGC GAACATCCTT GCGGGTAAAG CCACGGAAAT CGCCGCCAGC
GGTGGAGAAC TGATTGAGCA AGTGGTAGTG ACTATGGCCT CGATTAACGA ATCCGCGCAA
AAGATCGCCG ATATTATAGG TGTGATCGAT GGTATTGCTT TCCAAACCAA TATTCTGGCA
CTCAATGCTG CGGTAGAGGC CGCTAGAGCC GGTGAACAAG GCCGCGGATT TTCCGTAGTC
GCCTCCGAAG TACGCTCACT CGCACAGCGC TCAGCCAATG CAGCGAAAGA TATTAAGGCG
CTCATCTCAG ATTCCGTGAG TAAAATCAGC AATGGGAATG AATTGGTGGA TCGCTCCGGC
AGCACCATGA AAGACATAGT CGTGTCGATC AAGCGAGTCC ATGATTTGAT GGCCGATATC
GCCTCAGCGT CAGCCGAGCA GGCAACGGGG ATCAATGAAG TGAACCAAGC AGTCAATCAG
ATGGATGAGA TGACCCAACA AAATGCCGCA CTCGTCGAAG AGGCAGCCGC GGCTTCAGAA
AGCCTATTAG CACAGGCCGA GCAGCTCTAT GACCATGTCG CTATGTTCAG ATTGCCAGAT
CAGGACACGA GCGCCCCATC ACTGTTGAAA GCGGTCAATA AGCGCCCGCA ATCCGCACCA
GTGACTCGAC ATCCGGCCAG CCACATCGCT AAAACGCCAG CAAAAATCAC GGCCAAAGCC
AGCTCGAGGG CACAACCCGT TATGCAGGTC GCGCACGATG AAGAATGGGA GAGTTTTTGA
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| Protein sequence | MGLLARLFST APHHPTQPAE VKPDPLMQSP VTTETTALQP EPQVAPYQTD LALTTPESDL
TPQVNQAFVQ VIREHLALLE CEPNGTICYA SDAFAHLCRV SAEAMVGADF ANLWRTHQQP
SVQRLLQDAK KGHPVSAELQ LSRSQEAIWI KADLYPIKAI NGQLQNVVVL LQDITAAKLE
KIDRSGQMNA VNLTQAVIEF TLDGTILTAN QNFLQTVGYQ LDEIQGRHHS MFVDEQYKQS
QEYQHFWQRL RSGEFFVDEY KRFGKGGKEI WIQASYNPIM DSEGKPYKVV KYATNVTQRK
MVVNEVKRVM TALSSGDLSA QLTHPFEGEF AELGEVISQF IVTLRQIITD INSVAATIKL
AATEISNGNT DLSSRTEQQA SNLEQTASSM EELNSTVRQN SDNAMQANIL AGKATEIAAS
GGELIEQVVV TMASINESAQ KIADIIGVID GIAFQTNILA LNAAVEAARA GEQGRGFSVV
ASEVRSLAQR SANAAKDIKA LISDSVSKIS NGNELVDRSG STMKDIVVSI KRVHDLMADI
ASASAEQATG INEVNQAVNQ MDEMTQQNAA LVEEAAAASE SLLAQAEQLY DHVAMFRLPD
QDTSAPSLLK AVNKRPQSAP VTRHPASHIA KTPAKITAKA SSRAQPVMQV AHDEEWESF
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