Gene SO_2123 details

Gene Information

• Locus tag: SO_2123
• ID: 1169866
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 2228055
• End bp: 2230019
• Gene Length: 1965 bp
• Protein Length: 654 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637343988
• Product: methyl-accepting chemotaxis protein
• Protein accession: NP_717726
• Protein GI: 24373683
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTATCT TAGATATATT CGGTAATACC GAAGAGCGCC AACACCAAGA TGAAGAGCGT 
CAACGTTATT TCCAGTTGCT CGATAATAGT CGTAATAATT TTATGATTGC CGATAGCGAT 
CGTAATATCA TTTATGCCAA TAAGGCCGTA CTGAATATGT TGTCAGAGGC TGAGGCAGAT 
ATCCGTAAAC AGTTACCCCA ATTTTCGGTT GCTAGGGTTA TTGGCAGTAA TATCGATATC 
TTCCATGTGA ATCCTGCCCA TCAGCGCAAT ATGTTAGAAA GATTGACGCA ATCCCACACG 
GCACAAATAA GTATTGGTAA GCGTATTTTT AAATTAATTT TAACGCCGAT TATTTCACGT 
GATAATAAAC ATTTGGGCAC TGGAGTTGAG TGGATTGACC GTACTGAAAG CATTGATGCC 
GAGCGGGCAA CGCAGCGGAT ATTAGAAGCA CTAAACAATA CCAGTACCAA CGTGATGATT 
GCTGATGCCA ATCGAACCAT TATTTATATG AATCGCTCGG TAGAAGCCAT GTTACGCCGC 
TCCGAAAGTG AAATTCGCCA GGTTTTACCC CATTTTTCGG TGGACAAAAT CCTCGGCAGT 
TCCATGGATA TTTTCCATCG CAATCCAGCG CATCAAGCCA GCTTGCTTGA CAAACTCGAT 
CGCAAATATG AGTCGCAGAT CCAAGTGGCC AGTTGTCATT TTCGTTTAAC CGCCAGCCCT 
ATTATCTTAA CGTCTGGTGA GCGATTAGGC TCGGTTGTTG AATGGCTCGA CCGAACTGAA 
GAAGTCCAAG TTGAGCAAGA GATTGCGCGG ATTGTGGCAG CGGCAGCAGC GGGTGATTTT 
TCCCAGCGTG TTGATAGTCA TGGTAAACAG GGCTTTTTCT TGATGCTTGC CAATAGCCTC 
AATTCACTGA TTGAGACCTC GGATCGGGGG CTACAGGATG TCGCTCGAGT GCTAATGGCC 
ATGGCCGAAG GGGATCTGAC AACTCGTATC TATAACGAGT ATGAAGGTAC CTTCAACGAT 
TTGAAAAACT ATTCAAATCA AACCGCTGAA AAGCTTTCCT ACATGATAAG AGATATTCAA 
AAAGCGGCTG ACACCATCAA CACTGCATCT TCAGAAATCG CCCAAGGCAA TGCTGACCTC 
TCCAGTCGTA CTGAGGAGCA AGCCTCCAGT CTCGAAGAAA CTTCCGCAAG CATGGAAGAG 
TTAACGGGAA CCGTGAAATT AAATGCCGAT AATGCAAGCC AAGCCAATGC GTTAGCGTCG 
AAAGCGGCGG ATGTGGCTGA AGACGGGGGC GAGCTTATCC AACAGGTTGT GCAAACCATG 
GCATCTATTA ATGAATCGGC ACGAAAAATT GCAGATATTA TAGGTGTGAT TGATGGTATT 
GCTTTCCAAA CCAATATATT AGCGCTTAAT GCAGCGGTTG AGGCTGCAAG AGCAGGTGAG 
CAGGGGCGCG GTTTTGCGGT AGTGGCTTCA GAAGTGCGAA GCTTGGCTCA ACGTTCTGCA 
AATGCCGCGA AAGATATCAA GGCATTGATC TCTGATTCAG TCAGTAAAAT TGATAGTGGT 
AATAATTTGG TTGGAAAATC CGGCGATACC ATGAAGGAAA TTGTCATTGC AATCAAGCGA 
GTAAACGACA TTATGGCGGA AATTGCCTCC GCGTCTAATG AGCAAGCGAT TGGTATCGAT 
GAGATTGGTA AAGCCGTCGT ACAAATGGAT GAAATGACAC AGCAGAATGC GGCTCTTGTT 
GAAGAAGCTG CTGCGGCCGC TGAAAGTATG CAATCTCAAG CACAGCAACT GGCAGATAGT 
GTGGCAAATT TCAAAGTGGA TGAGGAAACG AGATCAGCTC GACATACTAC AGAGCTTAAA 
AAAATACCCC AAAAAATACC GACATTAGCG CGGGTAACCC CCAAACCTAA AGCGATGACG 
CCTAAGCTGA ATAAAGCAGA TCAAGATGAA TGGGAAGAAT TTTGA 

 

Protein sequence

MGILDIFGNT EERQHQDEER QRYFQLLDNS RNNFMIADSD RNIIYANKAV LNMLSEAEAD 
IRKQLPQFSV ARVIGSNIDI FHVNPAHQRN MLERLTQSHT AQISIGKRIF KLILTPIISR 
DNKHLGTGVE WIDRTESIDA ERATQRILEA LNNTSTNVMI ADANRTIIYM NRSVEAMLRR 
SESEIRQVLP HFSVDKILGS SMDIFHRNPA HQASLLDKLD RKYESQIQVA SCHFRLTASP 
IILTSGERLG SVVEWLDRTE EVQVEQEIAR IVAAAAAGDF SQRVDSHGKQ GFFLMLANSL 
NSLIETSDRG LQDVARVLMA MAEGDLTTRI YNEYEGTFND LKNYSNQTAE KLSYMIRDIQ 
KAADTINTAS SEIAQGNADL SSRTEEQASS LEETSASMEE LTGTVKLNAD NASQANALAS 
KAADVAEDGG ELIQQVVQTM ASINESARKI ADIIGVIDGI AFQTNILALN AAVEAARAGE 
QGRGFAVVAS EVRSLAQRSA NAAKDIKALI SDSVSKIDSG NNLVGKSGDT MKEIVIAIKR 
VNDIMAEIAS ASNEQAIGID EIGKAVVQMD EMTQQNAALV EEAAAAAESM QSQAQQLADS 
VANFKVDEET RSARHTTELK KIPQKIPTLA RVTPKPKAMT PKLNKADQDE WEEF