More than 300 homologs were found in PanDaTox collection
for query gene SO_2123 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004347  SO_2123  methyl-accepting chemotaxis protein  100 
 
 
654 aa  1333    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  85.39 
 
 
657 aa  1108    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  89.02 
 
 
656 aa  1161    Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  89.18 
 
 
656 aa  1163    Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  89.04 
 
 
657 aa  1164    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  85.09 
 
 
664 aa  1112    Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  85.11 
 
 
665 aa  1116    Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  84.94 
 
 
664 aa  1108    Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  48.49 
 
 
767 aa  593  1e-168  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  48.85 
 
 
860 aa  593  1e-168  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.74 
 
 
1123 aa  581  1e-164  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  47.53 
 
 
863 aa  573  1.0000000000000001e-162  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  59.81 
 
 
679 aa  565  1.0000000000000001e-159  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.75 
 
 
864 aa  560  1e-158  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  60.2 
 
 
679 aa  556  1e-157  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0729  PAS  57.98 
 
 
945 aa  518  1.0000000000000001e-145  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  54.25 
 
 
792 aa  491  1e-137  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  42.92 
 
 
678 aa  478  1e-133  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  50.56 
 
 
775 aa  471  1.0000000000000001e-131  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  50.72 
 
 
797 aa  445  1e-123  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_007912  Sde_3112  putative methyl-accepting chemotaxis sensory transducer  51.3 
 
 
1029 aa  444  1e-123  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  50.94 
 
 
793 aa  444  1e-123  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_007650  BTH_II0158  chemotaxis protein  51.72 
 
 
779 aa  405  1e-111  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0206  methyl-accepting chemotaxis protein  47.86 
 
 
793 aa  404  1e-111  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.7 
 
 
701 aa  400  9.999999999999999e-111  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  53.12 
 
 
755 aa  389  1e-106  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  52.53 
 
 
752 aa  379  1e-104  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  53.52 
 
 
733 aa  380  1e-104  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  53.62 
 
 
753 aa  379  1e-104  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  53.42 
 
 
705 aa  378  1e-103  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_009457  VC0395_A2418  methyl-accepting chemotaxis protein  60.78 
 
 
659 aa  371  1e-101  Vibrio cholerae O395  Bacteria  hitchhiker  0.00134538  n/a   
 
 
-
 
NC_007520  Tcr_0553  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.73 
 
 
888 aa  371  1e-101  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  52.79 
 
 
740 aa  365  2e-99  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  51.39 
 
 
745 aa  358  1.9999999999999998e-97  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  40.74 
 
 
610 aa  357  5e-97  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  56.4 
 
 
706 aa  357  5.999999999999999e-97  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  55.78 
 
 
843 aa  352  8.999999999999999e-96  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3301  methyl-accepting chemotaxis sensory transducer  51.38 
 
 
626 aa  344  2e-93  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  57.46 
 
 
572 aa  337  2.9999999999999997e-91  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  60.36 
 
 
559 aa  337  3.9999999999999995e-91  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  54.93 
 
 
569 aa  332  1e-89  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1530  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.92 
 
 
890 aa  331  2e-89  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.155082 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  55.92 
 
 
586 aa  330  6e-89  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_011071  Smal_3633  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.52 
 
 
845 aa  328  1.0000000000000001e-88  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.522396 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  52.16 
 
 
586 aa  326  8.000000000000001e-88  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  54.89 
 
 
559 aa  325  1e-87  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  61.03 
 
 
596 aa  325  2e-87  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  50.83 
 
 
579 aa  325  2e-87  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  54.08 
 
 
527 aa  324  3e-87  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  60.14 
 
 
542 aa  323  4e-87  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  49.48 
 
 
578 aa  324  4e-87  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  56.17 
 
 
573 aa  321  1.9999999999999998e-86  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  65.62 
 
 
592 aa  322  1.9999999999999998e-86  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  51.81 
 
 
589 aa  321  3e-86  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  59.03 
 
 
583 aa  320  3.9999999999999996e-86  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  52.62 
 
 
580 aa  320  3.9999999999999996e-86  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  59.67 
 
 
532 aa  319  7.999999999999999e-86  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  58.82 
 
 
653 aa  319  1e-85  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  58.82 
 
 
653 aa  319  1e-85  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  60.27 
 
 
515 aa  318  2e-85  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  51.86 
 
 
580 aa  317  5e-85  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  57.43 
 
 
532 aa  317  5e-85  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  60.36 
 
 
691 aa  315  9.999999999999999e-85  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  56.36 
 
 
594 aa  315  1.9999999999999998e-84  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  58.11 
 
 
552 aa  314  2.9999999999999996e-84  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  50.14 
 
 
598 aa  313  5.999999999999999e-84  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  55.16 
 
 
559 aa  312  1e-83  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  56.76 
 
 
471 aa  312  1e-83  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  53.29 
 
 
557 aa  310  5e-83  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  53.29 
 
 
557 aa  310  5e-83  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  55.59 
 
 
537 aa  310  5e-83  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  50.68 
 
 
557 aa  310  5.9999999999999995e-83  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  55.49 
 
 
551 aa  310  6.999999999999999e-83  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  57.14 
 
 
578 aa  309  9e-83  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  48.66 
 
 
589 aa  309  1.0000000000000001e-82  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  59.72 
 
 
557 aa  309  1.0000000000000001e-82  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  52.42 
 
 
553 aa  308  2.0000000000000002e-82  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  52.42 
 
 
553 aa  308  2.0000000000000002e-82  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  58.22 
 
 
585 aa  308  2.0000000000000002e-82  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  54.6 
 
 
557 aa  308  2.0000000000000002e-82  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  50 
 
 
579 aa  308  2.0000000000000002e-82  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  51.88 
 
 
566 aa  308  2.0000000000000002e-82  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  64.68 
 
 
585 aa  308  3e-82  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  61.62 
 
 
613 aa  307  3e-82  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  50.82 
 
 
562 aa  308  3e-82  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_012917  PC1_1208  methyl-accepting chemotaxis sensory transducer  50.14 
 
 
555 aa  307  4.0000000000000004e-82  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000392698  n/a   
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  61.09 
 
 
597 aa  307  4.0000000000000004e-82  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  63.99 
 
 
433 aa  306  5.0000000000000004e-82  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  56.33 
 
 
584 aa  306  6e-82  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_0080  methyl-accepting chemotaxis sensory transducer  50.29 
 
 
642 aa  306  6e-82  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0421  methyl-accepting chemotaxis sensory transducer  58.33 
 
 
618 aa  306  7e-82  Acidovorax citrulli AAC00-1  Bacteria  normal  0.627209  normal 
 
 
-
 
NC_013421  Pecwa_3123  methyl-accepting chemotaxis sensory transducer  48.32 
 
 
555 aa  306  1.0000000000000001e-81  Pectobacterium wasabiae WPP163  Bacteria  decreased coverage  0.000142041  n/a   
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  52.42 
 
 
553 aa  305  1.0000000000000001e-81  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  51.45 
 
 
547 aa  305  2.0000000000000002e-81  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  51.45 
 
 
547 aa  305  2.0000000000000002e-81  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  57.45 
 
 
515 aa  305  2.0000000000000002e-81  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  52.15 
 
 
553 aa  305  2.0000000000000002e-81  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  57.14 
 
 
642 aa  305  2.0000000000000002e-81  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  53.92 
 
 
536 aa  305  2.0000000000000002e-81  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  51.45 
 
 
547 aa  305  2.0000000000000002e-81  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
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