Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3497 |
Symbol | |
ID | 4605744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 4127316 |
End bp | 4129898 |
Gene Length | 2583 bp |
Protein Length | 860 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639782918 |
Product | putative methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_929369 |
Protein GI | 119776629 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.19961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCAG GCAATAAAAA GCTGATGGGG CCAGCCCCAT TTACCTTGGC CGGCATGGTG ATAGTTGCCG TTTCTTTGGT ACTCAGCCTG ATGGGGCAAT CCGGCAACAT GGTCAGTGCT GCCCTGGTTG TAGCGCTGAT TGTTTTGGGT ATTGGTTTAA GTCAGGGCGG CCCAAGAGTC GCAGAAGCTC TGGCAGAAAT ACGTCAGGCA CTGCGAAGCC ATAACAGACC CAAACTTGGC AGTTACGATA TCCCTGGCTG GCAGGAGTTC TCTGAAGAAT TTGCCATCTT CTGGGACGAG CAGCAAAAAG GCCGCGCCAC TCTCAAAGCC CTGGATATCT GCCAGGCTAA CGTAATGCTG GCGGACCCCA ACGGGGAAAT CCTCTACTTT AACGACTCGC TCCGCACCAC ACTGAGCGAT GCAGAAGCGG ATATTCGCAA AGAATTACCC AACTTTGATG TGAGTCGCCT GCAGGGCGCC AACATGGACA GCTTCCATCG GGATCCATCC CATCAGCGCC GTCTGATAGC CGGGTTAAAA TCCACCTACT CCGCCAAAAT CAAGGTCGGT ACCCGTACCT TCAGCCTGAT AGCCTCCCCC GTGTTCGATG AACAGCATCA ACGTATCGCA ACCGTAGTGG AATGGCAGGA CTTAACTGAA TCCCTGGCAC GGCAGCAAGC CGAAGAAAAA CTGATCCGCG AAACCAACCG TATCAAGCAG GCGCTGGATG TGTGTCAGGC GAACGTGATG ATGGCCGATG AAAATAACAA CATCATTTAC TTCAACCACT CCCTCCAAGC CATGTTGGCC GGTAATGAGG AAAAGCTGCG CGAATCCATC AACCGATTTG ATGTTTCCAC CCTGATGGGC ACCAACATAG ATATCTTCCA CAAACACCCC GAGCATCAGC GCCAGTTACT GGCCAAGCTC ACCAGCTCGT ACAAGGCCCG TATCAAGGTA GCAGGCTTGA CCTTCGACCT GATTGCCACA CCGGTATTCG ACAATGGCAA ACGCACAGGC ACCGTAGTGG AGTGGAGCGA CATTACTGCA CAGTTGGCCA GGGAAGAGAA AGAACGGGCT CTCGCTGCCG AAAATGCCCG AATCCGTCAG GCGCTTGACA ATGTATCGTC AAACACCATG GTGGCGGATG CAGACTGCAA CATCATCTAT CTCAATGATG CCGTTAAAAA AATGTTCAGC ATTGCCCAAT CCGACATTGT CAGGGATCTG CCCAATTTCA ACAGCAATAA GCTGATGGGT GCAAATATCG ATGTGTTCCA TAAAAACCCT GCTCACCAAC GAAACCTGCT GGCTAACCTC ACCAGTACTT ACACCAGTCA ACTTAAAGTC GGTGGTCGCA CCTTCCGGAT CATCGCCAAC CCTATCAACG ACACCGATGG CACCCGCATA GGGACTGTGG TTGAGTGGGC AGACCGCACC GCTGAAACGG CCATCGAGCA TGAGATTGAT GGCATCATCG CGGCCGCAAG CTCGGGCGAT TTGTCACAGC GCATTGCCAC CCATGATAAA GAAGGCTTCT TCCTCAATCT CTCCAACGGC CTCAACAGCC TTGTCGGCAT TGCCGATAAC GTTATTTCCG ATGTCGTTGA TATGTTTGAC GGTTTGGCCA AGGGTGATTT AACCCGCAAG ATTAATGGCG AATATGAGGG CCAGTTCGGC AAGCTCAAGG CCGACGCCAA TGCTACCGTC AGCCGCCTGA CCGAAGTCCT CGGCGGCATC AGCGAATCAG CCAATACCGT CACTTCAGGC GCCGAAGAAA TAGCTCAGGG CAATGCCGAT CTGAGCCAGC GCACCGAAGA GCAAGCCGCG TCACTGGAAG AAACAGCCTC CAGCATGGAA CAGATGACGG CCACCGTAAA ACAGAGCGCC GAAAACGCCA CCCTGGCTAA CACCCTCGCC AAAGAAGCCT CTACCAAGGC AGATCATGGC GGCAAGGTAG TCAAGCAGGC AGTCACCGCC ATGGAGGCCA TTAACGAATC CAGTAAGCGC ATTGCTGACA TCATAGGTGT CATCGACGAA ATCGCCTTCC AGACTAACCT ACTGGCACTG AATGCAGCGG TAGAAGCAGC CCGCGCCGGT GAACAGGGCA GAGGCTTTGC CGTGGTGGCT GGCGAGGTTC GCAATCTCGC CCAACGCTCA GCGGGGGCGG CCAAGGAAAT CAAAGAACTT ATCCGCGACA GCGTCAATAA GGTCAATGAC GGTACCTCGT TGGTGAACCA ATCCGGTAAT ACCCTGCAGG AAATCGTGCA TGCGGTATCC AAGGTGGCTG AGATGATTAA TGAAATCAGT GTCGCAGCCG AGCAGCAGGC ATCAGGCATT CAGGAAGTTA ATAAAGCAGT GTCTCAAATG GACGAGATGA CCCAGCAAAA CGCGGCACTG GTGGAAGAAG TATCCGCAGC TGGTGATGCC ATGGCCGAGC AGGCCCGCAA TATGCGACGT CAACTCGGGT TCTTCAGAAC CGACGTACAG GCATCCTCAG CGGCGCCACT GGCATTGGTC GCTGGCGGCG AAAAACGGCC GACCAAATTT AAAGCCAGTA AAGAAGAATG GCACGAGTTC TGA
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Protein sequence | MDAGNKKLMG PAPFTLAGMV IVAVSLVLSL MGQSGNMVSA ALVVALIVLG IGLSQGGPRV AEALAEIRQA LRSHNRPKLG SYDIPGWQEF SEEFAIFWDE QQKGRATLKA LDICQANVML ADPNGEILYF NDSLRTTLSD AEADIRKELP NFDVSRLQGA NMDSFHRDPS HQRRLIAGLK STYSAKIKVG TRTFSLIASP VFDEQHQRIA TVVEWQDLTE SLARQQAEEK LIRETNRIKQ ALDVCQANVM MADENNNIIY FNHSLQAMLA GNEEKLRESI NRFDVSTLMG TNIDIFHKHP EHQRQLLAKL TSSYKARIKV AGLTFDLIAT PVFDNGKRTG TVVEWSDITA QLAREEKERA LAAENARIRQ ALDNVSSNTM VADADCNIIY LNDAVKKMFS IAQSDIVRDL PNFNSNKLMG ANIDVFHKNP AHQRNLLANL TSTYTSQLKV GGRTFRIIAN PINDTDGTRI GTVVEWADRT AETAIEHEID GIIAAASSGD LSQRIATHDK EGFFLNLSNG LNSLVGIADN VISDVVDMFD GLAKGDLTRK INGEYEGQFG KLKADANATV SRLTEVLGGI SESANTVTSG AEEIAQGNAD LSQRTEEQAA SLEETASSME QMTATVKQSA ENATLANTLA KEASTKADHG GKVVKQAVTA MEAINESSKR IADIIGVIDE IAFQTNLLAL NAAVEAARAG EQGRGFAVVA GEVRNLAQRS AGAAKEIKEL IRDSVNKVND GTSLVNQSGN TLQEIVHAVS KVAEMINEIS VAAEQQASGI QEVNKAVSQM DEMTQQNAAL VEEVSAAGDA MAEQARNMRR QLGFFRTDVQ ASSAAPLALV AGGEKRPTKF KASKEEWHEF
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