More than 300 homologs were found in PanDaTox collection
for query gene Sama_3497 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  68.01 
 
 
864 aa  1170    Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  72.98 
 
 
1123 aa  1123    Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  56.5 
 
 
767 aa  721    Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  65.47 
 
 
863 aa  1137    Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  100 
 
 
860 aa  1759    Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  49.24 
 
 
657 aa  576  1.0000000000000001e-163  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  48.86 
 
 
656 aa  572  1.0000000000000001e-162  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  49.01 
 
 
656 aa  575  1.0000000000000001e-162  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  48.85 
 
 
654 aa  568  1e-160  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  48.71 
 
 
657 aa  565  1.0000000000000001e-159  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.72 
 
 
665 aa  565  1.0000000000000001e-159  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  48.49 
 
 
664 aa  564  1.0000000000000001e-159  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  48.55 
 
 
664 aa  561  1e-158  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  55.73 
 
 
679 aa  512  1e-143  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  55.38 
 
 
679 aa  502  1e-140  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0729  PAS  53.52 
 
 
945 aa  496  1e-139  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  42.64 
 
 
678 aa  494  9.999999999999999e-139  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3112  putative methyl-accepting chemotaxis sensory transducer  55.56 
 
 
1029 aa  481  1e-134  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  51.04 
 
 
792 aa  473  1.0000000000000001e-131  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  46.34 
 
 
793 aa  434  1e-120  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  46.76 
 
 
775 aa  425  1e-117  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  47.02 
 
 
797 aa  417  9.999999999999999e-116  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_007520  Tcr_0553  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  46.72 
 
 
888 aa  416  1e-114  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0206  methyl-accepting chemotaxis protein  48.45 
 
 
793 aa  400  9.999999999999999e-111  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0158  chemotaxis protein  48.28 
 
 
779 aa  397  1e-109  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  46.14 
 
 
701 aa  391  1e-107  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  43.23 
 
 
610 aa  371  1e-101  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  52.01 
 
 
733 aa  354  2.9999999999999997e-96  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1530  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.86 
 
 
890 aa  354  5e-96  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.155082 
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  50.38 
 
 
755 aa  352  1e-95  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  53.04 
 
 
752 aa  352  2e-95  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  52.21 
 
 
705 aa  347  6e-94  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  53.17 
 
 
745 aa  343  1e-92  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  54.02 
 
 
740 aa  339  9.999999999999999e-92  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  52.26 
 
 
753 aa  333  7.000000000000001e-90  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2145  methyl-accepting chemotaxis protein  35.33 
 
 
781 aa  326  9e-88  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.297887  normal 
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  53.35 
 
 
843 aa  323  7e-87  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3633  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.17 
 
 
845 aa  315  1.9999999999999998e-84  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.522396 
 
 
-
 
NC_010524  Lcho_1531  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.11 
 
 
1019 aa  315  1.9999999999999998e-84  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.301691 
 
 
-
 
NC_011989  Avi_2791  methyl-accepting chemotaxis protein  37.73 
 
 
622 aa  310  9e-83  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1532  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.28 
 
 
853 aa  307  7e-82  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.103077 
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  59.6 
 
 
617 aa  304  4.0000000000000003e-81  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  51.2 
 
 
706 aa  304  5.000000000000001e-81  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  56.63 
 
 
691 aa  298  2e-79  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  59.26 
 
 
609 aa  298  3e-79  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  58.92 
 
 
608 aa  298  4e-79  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  49.41 
 
 
651 aa  296  1e-78  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  56.57 
 
 
601 aa  293  1e-77  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  49.85 
 
 
552 aa  292  2e-77  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  63.67 
 
 
515 aa  291  3e-77  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  54.08 
 
 
584 aa  291  3e-77  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  51.74 
 
 
572 aa  291  4e-77  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  63.67 
 
 
515 aa  291  4e-77  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  55.44 
 
 
554 aa  291  4e-77  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  53.62 
 
 
579 aa  290  7e-77  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  53.25 
 
 
566 aa  290  8e-77  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  51.31 
 
 
559 aa  289  1e-76  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  55.56 
 
 
617 aa  288  2e-76  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  54.24 
 
 
580 aa  289  2e-76  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0104  methyl-accepting chemotaxis sensory transducer  53.63 
 
 
548 aa  288  2.9999999999999996e-76  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  53.45 
 
 
589 aa  288  4e-76  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  46.42 
 
 
567 aa  288  4e-76  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  54.74 
 
 
578 aa  287  5e-76  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  45.65 
 
 
575 aa  287  5e-76  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_010338  Caul_0276  methyl-accepting chemotaxis sensory transducer  52.36 
 
 
657 aa  287  5e-76  Caulobacter sp. K31  Bacteria  normal  0.461968  normal  0.560518 
 
 
-
 
NC_011071  Smal_3007  methyl-accepting chemotaxis sensory transducer  46.05 
 
 
707 aa  287  5.999999999999999e-76  Stenotrophomonas maltophilia R551-3  Bacteria  normal  decreased coverage  0.00177393 
 
 
-
 
NC_010622  Bphy_2972  methyl-accepting chemotaxis sensory transducer  54.61 
 
 
597 aa  286  8e-76  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00113075 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  57.54 
 
 
587 aa  286  1.0000000000000001e-75  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  48.38 
 
 
661 aa  286  1.0000000000000001e-75  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  53.7 
 
 
551 aa  286  2.0000000000000002e-75  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  55.29 
 
 
557 aa  286  2.0000000000000002e-75  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  51.5 
 
 
618 aa  285  2.0000000000000002e-75  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  52.19 
 
 
598 aa  285  2.0000000000000002e-75  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  55.29 
 
 
557 aa  286  2.0000000000000002e-75  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  55.29 
 
 
557 aa  285  3.0000000000000004e-75  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  49.41 
 
 
555 aa  284  5.000000000000001e-75  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  53.07 
 
 
553 aa  284  6.000000000000001e-75  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  53.07 
 
 
553 aa  284  6.000000000000001e-75  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3301  methyl-accepting chemotaxis sensory transducer  47.61 
 
 
626 aa  283  8.000000000000001e-75  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  59.09 
 
 
515 aa  283  9e-75  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_009457  VC0395_A2418  methyl-accepting chemotaxis protein  50.47 
 
 
659 aa  283  9e-75  Vibrio cholerae O395  Bacteria  hitchhiker  0.00134538  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  52.63 
 
 
592 aa  283  9e-75  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_010681  Bphyt_0231  methyl-accepting chemotaxis sensory transducer  63.79 
 
 
324 aa  283  1e-74  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  50 
 
 
547 aa  283  1e-74  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  52.88 
 
 
653 aa  283  1e-74  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  50 
 
 
547 aa  283  1e-74  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  53.07 
 
 
553 aa  283  1e-74  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_010557  BamMC406_5887  methyl-accepting chemotaxis sensory transducer  50.66 
 
 
519 aa  283  1e-74  Burkholderia ambifaria MC40-6  Bacteria  normal  0.330697  normal 
 
 
-
 
NC_008392  Bamb_6127  methyl-accepting chemotaxis sensory transducer  50.66 
 
 
519 aa  283  1e-74  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0128017 
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  50 
 
 
547 aa  283  1e-74  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  52.88 
 
 
653 aa  283  1e-74  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  53.07 
 
 
553 aa  283  1e-74  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  50 
 
 
547 aa  282  2e-74  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  57.05 
 
 
600 aa  282  2e-74  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  51.07 
 
 
586 aa  282  2e-74  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  62.2 
 
 
513 aa  282  2e-74  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.2 
 
 
513 aa  282  2e-74  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  52.51 
 
 
586 aa  282  2e-74  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  58.51 
 
 
546 aa  281  3e-74  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_27970  chemotaxis sensory transducer  47.9 
 
 
575 aa  281  3e-74  Azotobacter vinelandii DJ  Bacteria  normal  0.0997024  n/a   
 
 
-
 
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